EL492543
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EL492543 vs. ExPASy Swiss-Prot
Match: RS16_XANP2 (30S ribosomal protein S16 OS=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) GN=rpsP PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 1.870e-17 Identity = 41/79 (51.90%), Postives = 56/79 (70.89%), Query Frame = 1 Query: 13 IRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDCGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRAGLL 249 IRLAR G K +P+YR++ AD+RSPRDG+ +E +G +NPL +D R+ L+ D+ K WL GAQP+D V R L AGL+ Sbjct: 5 IRLARGGAKKRPYYRIVIADARSPRDGRFIEKIGTFNPLLAKDAENRVVLDADKAKAWLEKGAQPTDRVARFLDAAGLM 83
BLAST of EL492543 vs. ExPASy Swiss-Prot
Match: RS16_RHOCS (30S ribosomal protein S16 OS=Rhodospirillum centenum (strain ATCC 51521 / SW) GN=rpsP PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 1.870e-17 Identity = 42/84 (50.00%), Postives = 58/84 (69.05%), Query Frame = 1 Query: 7 VVIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDCGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRAGLLPPP 258 V IRL+R G K +PFY ++ A+SR+PRDG +E +G YNP+ D +R+ L DR+K WL+ GAQP+D V R L +A L+P P Sbjct: 3 VKIRLSRGGAKKRPFYSIVVANSRAPRDGDFIEKVGTYNPMVPHDHPERVVLQEDRIKEWLAKGAQPTDRVARFLGKANLIPMP 86
BLAST of EL492543 vs. ExPASy Swiss-Prot
Match: RS16_PARDP (30S ribosomal protein S16 OS=Paracoccus denitrificans (strain Pd 1222) GN=rpsP PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 1.870e-17 Identity = 42/78 (53.85%), Postives = 55/78 (70.51%), Query Frame = 1 Query: 13 IRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDCGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRAGL 246 IRLAR G K +P Y ++A+DSR PRDG+ +E LG YNPL +D R+ +N +RV+YWL GAQP+D V R L AG+ Sbjct: 5 IRLARGGSKKRPHYAIVASDSRMPRDGRFIEKLGTYNPLLPKDSEDRIKMNLERVQYWLGQGAQPTDRVARFLEAAGV 82
BLAST of EL492543 vs. ExPASy Swiss-Prot
Match: RS16_GLUDA (30S ribosomal protein S16 OS=Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5) GN=rpsP PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 2.442e-17 Identity = 42/82 (51.22%), Postives = 55/82 (67.07%), Query Frame = 1 Query: 13 IRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDCGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRAGLLPPP 258 IRLAR G K +P+Y ++ ADSRSPRDG+ +E +G YNP+ D R+ L +R+ +WLS GA P+D V R L AGL P P Sbjct: 5 IRLARAGAKKRPYYHIVIADSRSPRDGRFIEKVGAYNPMLPSDHADRVRLVNERITHWLSQGALPTDRVARFLGNAGLAPKP 86
BLAST of EL492543 vs. ExPASy Swiss-Prot
Match: RT16_PONAB (28S ribosomal protein S16, mitochondrial OS=Pongo abelii GN=MRPS16 PE=2 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 3.190e-17 Identity = 38/82 (46.34%), Postives = 56/82 (68.29%), Query Frame = 1 Query: 7 VVIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDCGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRAGLLP 252 + IRLA GC N+PFYR++AA ++ PRDG+ +E LG Y+PLP K + LN DR+++W+ GA S P++++L AG P Sbjct: 17 LTIRLALGGCTNRPFYRIVAAHNKCPRDGRFVEQLGSYDPLPNSHGEKLVALNLDRIRHWIGCGAHLSKPMEKLLGLAGFFP 98
BLAST of EL492543 vs. ExPASy Swiss-Prot
Match: RT16_HUMAN (28S ribosomal protein S16, mitochondrial OS=Homo sapiens GN=MRPS16 PE=1 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 3.190e-17 Identity = 38/82 (46.34%), Postives = 56/82 (68.29%), Query Frame = 1 Query: 7 VVIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDCGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRAGLLP 252 + IRLA GC N+PFYR++AA ++ PRDG+ +E LG Y+PLP K + LN DR+++W+ GA S P++++L AG P Sbjct: 17 LTIRLALGGCTNRPFYRIVAAHNKCPRDGRFVEQLGSYDPLPNSHGEKLVALNLDRIRHWIGCGAHLSKPMEKLLGLAGFFP 98
BLAST of EL492543 vs. ExPASy Swiss-Prot
Match: RS16_EHRRG (30S ribosomal protein S16 OS=Ehrlichia ruminantium (strain Gardel) GN=rpsP PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 3.190e-17 Identity = 39/71 (54.93%), Postives = 54/71 (76.06%), Query Frame = 1 Query: 7 VVIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDCGKRMGLNFDRVKYWLSVGAQPSDPV 219 V IRLARFG K +PFYRV+ ADSR RDG+ +E+LG+YNP+ ++ + + DR+KYWLSVGAQP++ + Sbjct: 3 VKIRLARFGAKKRPFYRVVVADSRVARDGRFIELLGFYNPMLPKEHPSFLKVKIDRLKYWLSVGAQPTERI 73
BLAST of EL492543 vs. ExPASy Swiss-Prot
Match: RS16_STRPZ (30S ribosomal protein S16 OS=Streptococcus pyogenes serotype M49 (strain NZ131) GN=rpsP PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 4.166e-17 Identity = 43/81 (53.09%), Postives = 57/81 (70.37%), Query Frame = 1 Query: 7 VVIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDCGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRAGLL 249 V IRL R G K KPFYR+ ADSR+PRDG+ +E +G YNPL ++ ++ + DRV WLS GAQPSD V+ IL +AG++ Sbjct: 3 VKIRLTRMGSKKKPFYRINVADSRAPRDGRFIETVGTYNPLVAEN---QITIKEDRVLEWLSKGAQPSDTVRNILSKAGVM 80
BLAST of EL492543 vs. ExPASy Swiss-Prot
Match: RS16_STRPM (30S ribosomal protein S16 OS=Streptococcus pyogenes serotype M28 GN=rpsP PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 4.166e-17 Identity = 43/81 (53.09%), Postives = 57/81 (70.37%), Query Frame = 1 Query: 7 VVIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDCGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRAGLL 249 V IRL R G K KPFYR+ ADSR+PRDG+ +E +G YNPL ++ ++ + DRV WLS GAQPSD V+ IL +AG++ Sbjct: 3 VKIRLTRMGSKKKPFYRINVADSRAPRDGRFIETVGTYNPLVAEN---QITIKEDRVLEWLSKGAQPSDTVRNILSKAGVM 80
BLAST of EL492543 vs. ExPASy Swiss-Prot
Match: RS16_STRPG (30S ribosomal protein S16 OS=Streptococcus pyogenes serotype M5 (strain Manfredo) GN=rpsP PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 4.166e-17 Identity = 43/81 (53.09%), Postives = 57/81 (70.37%), Query Frame = 1 Query: 7 VVIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDCGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRAGLL 249 V IRL R G K KPFYR+ ADSR+PRDG+ +E +G YNPL ++ ++ + DRV WLS GAQPSD V+ IL +AG++ Sbjct: 3 VKIRLTRMGSKKKPFYRINVADSRAPRDGRFIETVGTYNPLVAEN---QITIKEDRVLEWLSKGAQPSDTVRNILSKAGVM 80 The following BLAST results are available for this feature:
BLAST of EL492543 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >EL492543 ID=EL492543; Name=EL492543; organism=Citrus sinensis; type=EST; length=259bpback to top |