EL492543
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EL492543 vs. ExPASy Swiss-Prot
Match: RS16_DEHE1 (30S ribosomal protein S16 OS=Dehalococcoides ethenogenes (strain 195) GN=rpsP PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 3.089e-12 Identity = 31/79 (39.24%), Postives = 51/79 (64.56%), Query Frame = 1 Query: 13 IRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDCGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRAGLL 249 IRL R G KP YR++ ++RSPRD + +++G YNP+ + + +N ++ YW+ GAQP+D V R+L +AG++ Sbjct: 4 IRLTRIGAPKKPCYRIIVTEARSPRDATYTDLVGTYNPMTNPE---TVVINAEKALYWIGKGAQPTDTVARLLKKAGVV 79
BLAST of EL492543 vs. ExPASy Swiss-Prot
Match: RS16_BORGA (30S ribosomal protein S16 OS=Borrelia garinii GN=rpsP PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 3.089e-12 Identity = 36/80 (45.00%), Postives = 53/80 (66.25%), Query Frame = 1 Query: 7 VVIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDCGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRAGL 246 V IRL R G K +P+YR++ +S SPRDG+ +E LGYY+P+ Q K++ + DR+K W+S GA SD V+ +L + L Sbjct: 3 VRIRLKRMGAKKRPYYRIVVMNSASPRDGRAIEELGYYHPVEKQ---KQIKIKEDRMKDWISKGAILSDTVKMLLNKNNL 79
BLAST of EL492543 vs. ExPASy Swiss-Prot
Match: RS16_BACSU (30S ribosomal protein S16 OS=Bacillus subtilis GN=rpsP PE=1 SV=3) HSP 1 Score: 70.4774 bits (171), Expect = 3.089e-12 Identity = 34/81 (41.98%), Postives = 49/81 (60.49%), Query Frame = 1 Query: 7 VVIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDCGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRAGLL 249 V IRL R G K PFYR++ ADSRSPRDG+ +E +G YNP+ + ++ + WL GA+PSD V+ + G++ Sbjct: 3 VKIRLKRMGAKKSPFYRIVVADSRSPRDGRFIETVGTYNPVAKP---AEVKIDEELALKWLQTGAKPSDTVRNLFSSQGIM 80
BLAST of EL492543 vs. ExPASy Swiss-Prot
Match: RS16_AZOPC (30S ribosomal protein S16 OS=Azobacteroides pseudotrichonymphae genomovar. CFP2 GN=rpsP PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 3.089e-12 Identity = 35/78 (44.87%), Postives = 48/78 (61.54%), Query Frame = 1 Query: 13 IRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDCGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRAGL 246 IRL R G K FY ++ ADSR+PR+G +E +G+YNP + L F+R YWL+VGAQP+D + IL G+ Sbjct: 5 IRLQRHGRKGYAFYHIVIADSRAPRNGNFIERIGFYNPNTNP---ATINLKFERALYWLNVGAQPTDTARNILSCEGI 79
BLAST of EL492543 vs. ExPASy Swiss-Prot
Match: RS16_ACIC1 (30S ribosomal protein S16 OS=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) GN=rpsP PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 3.089e-12 Identity = 38/92 (41.30%), Postives = 55/92 (59.78%), Query Frame = 1 Query: 7 VVIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDCGKRMGLNFDRVKYWLSVGAQPSDPVQRIL--------FRAGLLPPP 258 V IRL R G P+YR++ AD+R+ RDG+ +E +G Y+P + + +N +RV YWLSVGAQP++PV+ +L F PPP Sbjct: 3 VKIRLTRMGKIRAPYYRIVVADARTKRDGRAIEEIGQYDP---KQEPSLIRVNSERVAYWLSVGAQPTEPVKALLKVTGDWQRFTGEPAPPP 91
BLAST of EL492543 vs. ExPASy Swiss-Prot
Match: RS16_SULDN (30S ribosomal protein S16 OS=Sulfurimonas denitrificans (strain ATCC 33889 / DSM 1251) GN=rpsP PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 4.035e-12 Identity = 35/76 (46.05%), Postives = 51/76 (67.11%), Query Frame = 1 Query: 10 VIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDCGKRMGLNFDRVKYWLSVGAQPSDPVQRILFR 237 VIRL R G K +PFYR+ DSR RDG +E++G++NP+ + K ++ +R+ YWLSVGA+ SD V++I R Sbjct: 4 VIRLTRMGRKKQPFYRIAVTDSRKRRDGGWIELIGHHNPMVAE---KTTVVDNERLDYWLSVGAKMSDRVKKITGR 76
BLAST of EL492543 vs. ExPASy Swiss-Prot
Match: RS16_SHEPA (30S ribosomal protein S16 OS=Shewanella pealeana (strain ATCC 700345 / ANG-SQ1) GN=rpsP PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 4.035e-12 Identity = 33/76 (43.42%), Postives = 55/76 (72.37%), Query Frame = 1 Query: 7 VVIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLP-GQDCGKRMGLNFDRVKYWLSVGAQPSDPVQRIL 231 V IRLAR G K +PFY ++ ADSR+ RDG+ +E +G++NP+ GQ+ + + L+ DRV++W++ GA +D V +++ Sbjct: 2 VTIRLARGGAKKRPFYNIVVADSRNARDGRFIERVGFFNPVARGQE--EALRLDLDRVEHWVANGAATTDRVAKLI 75
BLAST of EL492543 vs. ExPASy Swiss-Prot
Match: RS16_SHEHH (30S ribosomal protein S16 OS=Shewanella halifaxensis (strain HAW-EB4) GN=rpsP PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 4.035e-12 Identity = 33/76 (43.42%), Postives = 55/76 (72.37%), Query Frame = 1 Query: 7 VVIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLP-GQDCGKRMGLNFDRVKYWLSVGAQPSDPVQRIL 231 V IRLAR G K +PFY ++ ADSR+ RDG+ +E +G++NP+ GQ+ + + L+ DRV++W++ GA +D V +++ Sbjct: 2 VTIRLARGGAKKRPFYNIVVADSRNARDGRFIERVGFFNPVARGQE--EALRLDLDRVEHWVANGAATTDRVAKLI 75
BLAST of EL492543 vs. ExPASy Swiss-Prot
Match: RS16_RALEJ (30S ribosomal protein S16 OS=Ralstonia eutropha (strain JMP134) GN=rpsP PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 4.035e-12 Identity = 35/75 (46.67%), Postives = 51/75 (68.00%), Query Frame = 1 Query: 7 VVIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDCGKRMGLNFDRVKYWLSVGAQPSDPVQRIL 231 VVIRLAR G K +PF+ ++A DSR+ RDG+ +E +G+YNPL + + + + DR+ YW VGAQ S V R++ Sbjct: 2 VVIRLARGGSKKRPFFNIVATDSRNRRDGRFIERVGFYNPLASEG-EEGLRVVADRLAYWQGVGAQLSPTVARLV 75
BLAST of EL492543 vs. ExPASy Swiss-Prot
Match: RS16_ORITB (30S ribosomal protein S16 OS=Orientia tsutsugamushi (strain Boryong) GN=rpsP PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 4.035e-12 Identity = 34/83 (40.96%), Postives = 55/83 (66.27%), Query Frame = 1 Query: 7 VVIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDCGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRAGLLPP 255 V IRLAR G K +++++ A++ SPRDG +E +G+YNP+ +D +R+ L DR+++WLS GAQP++ V L + + P Sbjct: 3 VKIRLARSGAKKCAYFKIVIANNCSPRDGAFIEKVGHYNPMLPKDNHERVILKTDRIEHWLSHGAQPTEKVINFLQQFSITLP 85 The following BLAST results are available for this feature:
BLAST of EL492543 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >EL492543 ID=EL492543; Name=EL492543; organism=Citrus sinensis; type=EST; length=259bpback to top |