EL492543
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EL492543 vs. ExPASy Swiss-Prot
Match: RS16_NOCFA (30S ribosomal protein S16 OS=Nocardia farcinica GN=rpsP PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 4.035e-12 Identity = 35/75 (46.67%), Postives = 53/75 (70.67%), Query Frame = 1 Query: 7 VVIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDCGKRMGLNFDRVKYWLSVGAQPSDPVQRIL 231 V I+L R G P YRV+ AD+R+ RDG+ +E +G Y+P ++ + ++ +RV+YWLSVGAQP++PVQR+L Sbjct: 3 VRIKLTRLGKIRNPQYRVVVADARTRRDGRAIESIGKYHP---KEEPSLIEIDSERVQYWLSVGAQPTEPVQRLL 74
BLAST of EL492543 vs. ExPASy Swiss-Prot
Match: RS16_METI4 (30S ribosomal protein S16 OS=Methylacidiphilum infernorum (isolate V4) GN=rpsP PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 4.035e-12 Identity = 35/81 (43.21%), Postives = 51/81 (62.96%), Query Frame = 1 Query: 7 VVIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDCGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRAGLL 249 VVIRL R G K +P YR++ AD R P +GK++E +G+Y+P+ G R L RV YWL GA+P++ V +I+ + L Sbjct: 3 VVIRLRREGKKGRPQYRIVVADKRCPTNGKYIEEVGFYDPMVEAPQGYR--LKLQRVSYWLKQGAKPTETVDQIIKKVSKL 81
BLAST of EL492543 vs. ExPASy Swiss-Prot
Match: RS16_HELAH (30S ribosomal protein S16 OS=Helicobacter acinonychis (strain Sheeba) GN=rpsP PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 4.035e-12 Identity = 36/77 (46.75%), Postives = 50/77 (64.94%), Query Frame = 1 Query: 10 VIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDCGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRA 240 VIRL R G K KPFYRV+ DSR RDG +E +GYYNPL K + ++ +R+ YW VGA+ S+ V+++ +A Sbjct: 3 VIRLTRIGRKKKPFYRVVVTDSRKRRDGGWIESIGYYNPLSEP---KDIKIDKERLDYWKGVGAKMSERVEKLSQKA 76
BLAST of EL492543 vs. ExPASy Swiss-Prot
Match: RS16_CLOPH (30S ribosomal protein S16 OS=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) GN=rpsP PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 4.035e-12 Identity = 35/81 (43.21%), Postives = 50/81 (61.73%), Query Frame = 1 Query: 7 VVIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDCGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRAGLL 249 V IRL R G K PFYRV+ ADSRSPRDGK + +G Y+P ++ + K WL+ GAQP++ + R+ +AG++ Sbjct: 3 VKIRLKRMGQKKAPFYRVIVADSRSPRDGKFIAEIGTYDPTQEPSA---FNVDEEAAKKWLADGAQPTETINRLFKKAGIV 80
BLAST of EL492543 vs. ExPASy Swiss-Prot
Match: RS16_BUCAT (30S ribosomal protein S16 OS=Buchnera aphidicola subsp. Acyrthosiphon pisum (strain Tuc7) GN=rpsP PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 4.035e-12 Identity = 31/75 (41.33%), Postives = 54/75 (72.00%), Query Frame = 1 Query: 7 VVIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDCGKRMGLNFDRVKYWLSVGAQPSDPVQRIL 231 V IRLAR+G K +PFY+++ ADSR R+G+ +E LGY+NP+ + + + LN +R+++W + GAQ S+ ++++ Sbjct: 2 VKIRLARYGTKKRPFYKLVVADSRFSRNGRFIERLGYFNPI-AKGKSEILKLNLERIEHWTNQGAQMSERTKKLI 75
BLAST of EL492543 vs. ExPASy Swiss-Prot
Match: RS16_BUCAI (30S ribosomal protein S16 OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=rpsP PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 4.035e-12 Identity = 31/75 (41.33%), Postives = 54/75 (72.00%), Query Frame = 1 Query: 7 VVIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDCGKRMGLNFDRVKYWLSVGAQPSDPVQRIL 231 V IRLAR+G K +PFY+++ ADSR R+G+ +E LGY+NP+ + + + LN +R+++W + GAQ S+ ++++ Sbjct: 2 VKIRLARYGTKKRPFYKLVVADSRFSRNGRFIERLGYFNPI-AKGKSEILKLNLERIEHWTNQGAQMSERTKKLI 75
BLAST of EL492543 vs. ExPASy Swiss-Prot
Match: RS16_BUCA5 (30S ribosomal protein S16 OS=Buchnera aphidicola subsp. Acyrthosiphon pisum (strain 5A) GN=rpsP PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 4.035e-12 Identity = 31/75 (41.33%), Postives = 54/75 (72.00%), Query Frame = 1 Query: 7 VVIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDCGKRMGLNFDRVKYWLSVGAQPSDPVQRIL 231 V IRLAR+G K +PFY+++ ADSR R+G+ +E LGY+NP+ + + + LN +R+++W + GAQ S+ ++++ Sbjct: 2 VKIRLARYGTKKRPFYKLVVADSRFSRNGRFIERLGYFNPI-AKGKSEILKLNLERIEHWTNQGAQMSERTKKLI 75
BLAST of EL492543 vs. ExPASy Swiss-Prot
Match: RS16_YERE8 (30S ribosomal protein S16 OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=rpsP PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 5.270e-12 Identity = 34/79 (43.04%), Postives = 53/79 (67.09%), Query Frame = 1 Query: 7 VVIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPL-PGQDCGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRA 240 V IRLAR G K +PFY+V+ DSR+ RDG+ +E +G++NP+ GQ + + L+ DR+ +W+ +GA SD V ++ A Sbjct: 2 VTIRLARGGAKKRPFYQVVVTDSRNARDGRFIERVGFFNPIASGQ--AEALRLDLDRINHWVELGATVSDRVSALIKEA 78
BLAST of EL492543 vs. ExPASy Swiss-Prot
Match: RS16_THENN (30S ribosomal protein S16 OS=Thermotoga neapolitana (strain ATCC 49049 / DSM 4359 / NS-E) GN=rpsP PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 5.270e-12 Identity = 35/81 (43.21%), Postives = 51/81 (62.96%), Query Frame = 1 Query: 7 VVIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDCGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRAGLL 249 V IRL R G + +PFYR++ DSR RDG ++E LGYYNPL + + ++ +R W+ GAQPSD V+ I + G++ Sbjct: 2 VRIRLTRMGKRKQPFYRIVVVDSRKRRDGAYIESLGYYNPLKEGE----IKIDVERAVDWILKGAQPSDTVRDIFKKFGVM 78
BLAST of EL492543 vs. ExPASy Swiss-Prot
Match: RS16_SHEWM (30S ribosomal protein S16 OS=Shewanella woodyi (strain ATCC 51908 / MS32) GN=rpsP PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 5.270e-12 Identity = 33/76 (43.42%), Postives = 55/76 (72.37%), Query Frame = 1 Query: 7 VVIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLP-GQDCGKRMGLNFDRVKYWLSVGAQPSDPVQRIL 231 V IRLAR G K +PFY ++ ADSR+ RDG+ +E +G++NP+ GQ+ + + L+ DRV++W++ GA S+ V +++ Sbjct: 2 VTIRLARGGAKKRPFYNIVVADSRNARDGRFIERVGFFNPMARGQE--ETLRLDLDRVEHWVTNGAGTSERVAKLI 75 The following BLAST results are available for this feature:
BLAST of EL492543 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >EL492543 ID=EL492543; Name=EL492543; organism=Citrus sinensis; type=EST; length=259bpback to top |