EL492543
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EL492543 vs. ExPASy Swiss-Prot
Match: RS16_PARUW (30S ribosomal protein S16 OS=Protochlamydia amoebophila (strain UWE25) GN=rpsP PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 6.883e-12 Identity = 29/73 (39.73%), Postives = 52/73 (71.23%), Query Frame = 1 Query: 13 IRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDCGKRMGLNFDRVKYWLSVGAQPSDPVQRIL 231 IRL + G N+ F+R++ D+RSPRDGK++E LG+YNP+ +D K++ DR+++WL++GA+ ++ ++ Sbjct: 5 IRLRQHGRTNRSFFRLVVTDARSPRDGKYVEALGWYNPVEAED-DKKLFFKADRIQHWLNLGAELTESAASLI 76
BLAST of EL492543 vs. ExPASy Swiss-Prot
Match: RS16_NITEC (30S ribosomal protein S16 OS=Nitrosomonas eutropha (strain C91) GN=rpsP PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 6.883e-12 Identity = 36/84 (42.86%), Postives = 51/84 (60.71%), Query Frame = 1 Query: 7 VVIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDCGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRAGLLPPP 258 VV+RLAR G K +PFY ++ ADSR RDGK +E +G+YNP + + + DR+ +W S GAQ S V R++ + G P Sbjct: 2 VVVRLARGGAKKRPFYNMVVADSRRHRDGKFIERVGFYNP-RATGGEESLRIQMDRLNHWQSQGAQLSSTVSRLVKQFGRQQKP 84
BLAST of EL492543 vs. ExPASy Swiss-Prot
Match: RS16_LEPCP (30S ribosomal protein S16 OS=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) GN=rpsP PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 6.883e-12 Identity = 35/78 (44.87%), Postives = 54/78 (69.23%), Query Frame = 1 Query: 7 VVIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDCGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRA 240 VVIRL+R G K +PFY ++AA+S + RDG+ LE +G+YNP+ + + + FDRV++W+S GAQ S R++ +A Sbjct: 2 VVIRLSRGGSKRRPFYNIVAANSANRRDGRFLERVGFYNPV-ASGGEEALRIAFDRVEHWVSHGAQLSPTAARLVKQA 78
BLAST of EL492543 vs. ExPASy Swiss-Prot
Match: RS16_KINRD (30S ribosomal protein S16 OS=Kineococcus radiotolerans (strain ATCC BAA-149 / DSM 14245 / SRS30216) GN=rpsP PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 6.883e-12 Identity = 34/75 (45.33%), Postives = 48/75 (64.00%), Query Frame = 1 Query: 7 VVIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDCGKRMGLNFDRVKYWLSVGAQPSDPVQRIL 231 V IRL R G PFYR++ ADSR+ RDG+ +E +G YNP+ + + +RV+YWL VGAQP++ V +L Sbjct: 3 VKIRLKRMGQIRAPFYRIVVADSRNKRDGRSIEEIGLYNPMTDP---STIEVKSERVQYWLGVGAQPTEQVAALL 74
BLAST of EL492543 vs. ExPASy Swiss-Prot
Match: RS16_DEIRA (30S ribosomal protein S16 OS=Deinococcus radiodurans GN=rpsP PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 6.883e-12 Identity = 32/80 (40.00%), Postives = 52/80 (65.00%), Query Frame = 1 Query: 7 VVIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDCGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRAGL 246 V IRL+RFG + P YR++ AD R PRDG ++E LG+Y+P + + ++ +R +W++ GAQP+D +R+L G+ Sbjct: 2 VKIRLSRFGSAHNPHYRIVVADVRRPRDGGYIESLGHYDPRKTSE--NFLKIDVERANHWIAQGAQPTDTARRLLRSQGV 79
BLAST of EL492543 vs. ExPASy Swiss-Prot
Match: RS16_DEIDV (30S ribosomal protein S16 OS=Deinococcus deserti (strain VCD115 / DSM 17065 / LMG 22923) GN=rpsP PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 6.883e-12 Identity = 33/80 (41.25%), Postives = 51/80 (63.75%), Query Frame = 1 Query: 7 VVIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDCGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRAGL 246 V IRL+RFG + P YR++ D+R PRDG ++E LG+Y+P + + +N +R YWL+ GAQP+ +R+L G+ Sbjct: 2 VKIRLSRFGSTHNPHYRIVVTDARRPRDGGYIENLGHYDPRKTTE--TYLKVNTERAAYWLAQGAQPTQTARRLLKAQGV 79
BLAST of EL492543 vs. ExPASy Swiss-Prot
Match: RS16_ACTPJ (30S ribosomal protein S16 OS=Actinobacillus pleuropneumoniae serotype 3 (strain JL03) GN=rpsP PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 6.883e-12 Identity = 36/79 (45.57%), Postives = 53/79 (67.09%), Query Frame = 1 Query: 7 VVIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPL-PGQDCGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRA 240 V IRL R G K +PFY+++ ADSRSPRDG+ +E +G++NPL GQ +R+ L+ +V W++ GA SD V ++ A Sbjct: 2 VTIRLTRGGAKKRPFYQIVVADSRSPRDGRFIERIGFFNPLAAGQ--AERLRLDVAKVDAWVAKGADLSDRVASLVKEA 78
BLAST of EL492543 vs. ExPASy Swiss-Prot
Match: RS16_ACTP7 (30S ribosomal protein S16 OS=Actinobacillus pleuropneumoniae serotype 7 (strain AP76) GN=rpsP PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 6.883e-12 Identity = 36/79 (45.57%), Postives = 53/79 (67.09%), Query Frame = 1 Query: 7 VVIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPL-PGQDCGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRA 240 V IRL R G K +PFY+++ ADSRSPRDG+ +E +G++NPL GQ +R+ L+ +V W++ GA SD V ++ A Sbjct: 2 VTIRLTRGGAKKRPFYQIVVADSRSPRDGRFIERIGFFNPLAAGQ--AERLRLDVAKVDAWVAKGADLSDRVASLVKEA 78
BLAST of EL492543 vs. ExPASy Swiss-Prot
Match: RS16_ACTP2 (30S ribosomal protein S16 OS=Actinobacillus pleuropneumoniae serotype 5b (strain L20) GN=rpsP PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 6.883e-12 Identity = 36/79 (45.57%), Postives = 53/79 (67.09%), Query Frame = 1 Query: 7 VVIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPL-PGQDCGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRA 240 V IRL R G K +PFY+++ ADSRSPRDG+ +E +G++NPL GQ +R+ L+ +V W++ GA SD V ++ A Sbjct: 2 VTIRLTRGGAKKRPFYQIVVADSRSPRDGRFIERIGFFNPLAAGQ--AERLRLDVAKVDAWVAKGADLSDRVASLVKEA 78
BLAST of EL492543 vs. ExPASy Swiss-Prot
Match: RS16_XANCP (30S ribosomal protein S16 OS=Xanthomonas campestris pv. campestris GN=rpsP PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 8.989e-12 Identity = 34/74 (45.95%), Postives = 48/74 (64.86%), Query Frame = 1 Query: 7 VVIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDCGKRMGLNFDRVKYWLSVGAQPSDPVQRI 228 V IRL R G K +PFY ++ D RS RDG+++E LGYYNP+ Q R+ L+ RV +W+ GAQ +D V+ + Sbjct: 2 VKIRLTRGGAKKRPFYHIIVTDVRSARDGRNIERLGYYNPV-AQGAEPRVVLDVARVDHWVGQGAQLTDKVRNL 74 The following BLAST results are available for this feature:
BLAST of EL492543 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >EL492543 ID=EL492543; Name=EL492543; organism=Citrus sinensis; type=EST; length=259bpback to top |