EL492543
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EL492543 vs. ExPASy Swiss-Prot
Match: RS16_LACGA (30S ribosomal protein S16 OS=Lactobacillus gasseri (strain ATCC 33323 / DSM 20243) GN=rpsP PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 4.166e-17 Identity = 42/81 (51.85%), Postives = 55/81 (67.90%), Query Frame = 1 Query: 7 VVIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDCGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRAGLL 249 V IR+ R G K KPFYR++ ADSR PRDG+ +E +GYYNPL D + L D++ WL GAQPSD V+ +L +AGL+ Sbjct: 3 VKIRMRRMGSKRKPFYRIVVADSRMPRDGRFIEEVGYYNPLTNPD---EVKLEEDKIFEWLEKGAQPSDTVRSLLSKAGLM 80
BLAST of EL492543 vs. ExPASy Swiss-Prot
Match: RS16_EHRRW (30S ribosomal protein S16 OS=Ehrlichia ruminantium (strain Welgevonden) GN=rpsP PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 4.166e-17 Identity = 39/71 (54.93%), Postives = 54/71 (76.06%), Query Frame = 1 Query: 7 VVIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDCGKRMGLNFDRVKYWLSVGAQPSDPV 219 V IRLARFG K +PFYRV+ ADSR RDG+ +E+LG+YNP+ ++ + + DR+KYWLSVGAQP++ + Sbjct: 3 VKIRLARFGAKKRPFYRVVVADSRVARDGRFIELLGFYNPMLPKEHPSFLKVKVDRLKYWLSVGAQPTERI 73
BLAST of EL492543 vs. ExPASy Swiss-Prot
Match: RT16_BOVIN (28S ribosomal protein S16, mitochondrial OS=Bos taurus GN=MRPS16 PE=1 SV=2) HSP 1 Score: 86.2705 bits (212), Expect = 5.441e-17 Identity = 37/82 (45.12%), Postives = 56/82 (68.29%), Query Frame = 1 Query: 7 VVIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDCGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRAGLLP 252 + IRLA GC N+PFYR++AA ++ PRDG+ +E LG Y+P+P K + LN DR+++W+ GA S PV+++L +G P Sbjct: 17 LTIRLALGGCTNRPFYRIVAAHNKCPRDGRFVEQLGSYDPMPNSHGEKLVALNLDRIRHWIGCGAHLSKPVEKLLGLSGFFP 98
BLAST of EL492543 vs. ExPASy Swiss-Prot
Match: RS16_ROSS1 (30S ribosomal protein S16 OS=Roseiflexus sp. (strain RS-1) GN=rpsP PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 5.441e-17 Identity = 42/81 (51.85%), Postives = 58/81 (71.60%), Query Frame = 1 Query: 7 VVIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDCGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRAGLL 249 V IRL R G +P YR++ ADSR+PRDGK +E++G+YNP+ K + + DRV+YWLSVGAQPS+ V R+L + G+L Sbjct: 2 VTIRLRRMGKTKQPSYRLVVADSRAPRDGKFIEIVGHYNPVRQP---KELHVKADRVRYWLSVGAQPSETVVRLLKQVGVL 79
BLAST of EL492543 vs. ExPASy Swiss-Prot
Match: RS16_GLUOX (30S ribosomal protein S16 OS=Gluconobacter oxydans GN=rpsP PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 5.441e-17 Identity = 42/82 (51.22%), Postives = 55/82 (67.07%), Query Frame = 1 Query: 13 IRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDCGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRAGLLPPP 258 IRLAR G K +P+Y ++ ADSRSPRDG+ +E +G YNP+ D R+ L +R+K+WLS GA +D V R L AGL P P Sbjct: 5 IRLARAGAKKRPYYHIVVADSRSPRDGRFIEKVGSYNPMLPADHADRIRLVDERIKHWLSNGALATDRVARFLGNAGLAPKP 86
BLAST of EL492543 vs. ExPASy Swiss-Prot
Match: RS16_DICTD (30S ribosomal protein S16 OS=Dictyoglomus turgidum (strain Z-1310 / DSM 6724) GN=rpsP PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 5.441e-17 Identity = 44/80 (55.00%), Postives = 55/80 (68.75%), Query Frame = 1 Query: 7 VVIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDCGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRAGL 246 V IRL R G KNKP YR++A DSR PRDGKHLE+LG+Y+P + + L +R+ YWLS GAQP+D V IL R G+ Sbjct: 2 VKIRLTRVGAKNKPAYRIVAMDSREPRDGKHLEILGFYDP---KTDPATIQLKEERILYWLSQGAQPTDTVLSILKRYGV 78
BLAST of EL492543 vs. ExPASy Swiss-Prot
Match: RT16_MOUSE (28S ribosomal protein S16, mitochondrial OS=Mus musculus GN=Mrps16 PE=2 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 7.106e-17 Identity = 37/82 (45.12%), Postives = 56/82 (68.29%), Query Frame = 1 Query: 7 VVIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDCGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRAGLLP 252 + IRLA GC N+PFYR++AA ++ PRDG+ +E LG Y+PLP K + LN DR+++W+ GA S P++++L +G P Sbjct: 17 LTIRLALGGCTNRPFYRIVAAHNKCPRDGRFVEQLGSYDPLPNSHGEKLVALNLDRIRHWIGCGAHLSKPMEKLLGLSGFFP 98
BLAST of EL492543 vs. ExPASy Swiss-Prot
Match: RS16_STRZT (30S ribosomal protein S16 OS=Streptococcus pneumoniae (strain Taiwan19F-14) GN=rpsP PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 7.106e-17 Identity = 44/81 (54.32%), Postives = 56/81 (69.14%), Query Frame = 1 Query: 7 VVIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDCGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRAGLL 249 V IRL R G K KPFYR+ ADSRSPRDG+ +E +G YNPL ++ ++ L DRV WL+ GAQPSD V+ IL + G+L Sbjct: 3 VKIRLTRMGSKKKPFYRINVADSRSPRDGRFIETVGTYNPLVAEN---QVTLKEDRVLAWLANGAQPSDTVRNILSKEGVL 80
BLAST of EL492543 vs. ExPASy Swiss-Prot
Match: RS16_STRZP (30S ribosomal protein S16 OS=Streptococcus pneumoniae (strain P1031) GN=rpsP PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 7.106e-17 Identity = 44/81 (54.32%), Postives = 56/81 (69.14%), Query Frame = 1 Query: 7 VVIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDCGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRAGLL 249 V IRL R G K KPFYR+ ADSRSPRDG+ +E +G YNPL ++ ++ L DRV WL+ GAQPSD V+ IL + G+L Sbjct: 3 VKIRLTRMGSKKKPFYRINVADSRSPRDGRFIETVGTYNPLVAEN---QVTLKEDRVLAWLANGAQPSDTVRNILSKEGVL 80
BLAST of EL492543 vs. ExPASy Swiss-Prot
Match: RS16_STRZJ (30S ribosomal protein S16 OS=Streptococcus pneumoniae (strain JJA) GN=rpsP PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 7.106e-17 Identity = 44/81 (54.32%), Postives = 56/81 (69.14%), Query Frame = 1 Query: 7 VVIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDCGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRAGLL 249 V IRL R G K KPFYR+ ADSRSPRDG+ +E +G YNPL ++ ++ L DRV WL+ GAQPSD V+ IL + G+L Sbjct: 3 VKIRLTRMGSKKKPFYRINVADSRSPRDGRFIETVGTYNPLVAEN---QVTLKEDRVLAWLANGAQPSDTVRNILSKEGVL 80 The following BLAST results are available for this feature:
BLAST of EL492543 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >EL492543 ID=EL492543; Name=EL492543; organism=Citrus sinensis; type=EST; length=259bpback to top |