EL492543
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EL492543 vs. ExPASy Swiss-Prot
Match: RS16_THETN (30S ribosomal protein S16 OS=Thermoanaerobacter tengcongensis GN=rpsP PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 9.281e-17 Identity = 39/81 (48.15%), Postives = 57/81 (70.37%), Query Frame = 1 Query: 7 VVIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDCGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRAGLL 249 V IRL RFG K +PFYR++ ADSRSPRDG+ ++ +GYYNP+ + ++ ++ K WLSVGAQPSD V+ + + G++ Sbjct: 3 VRIRLKRFGAKKRPFYRIVVADSRSPRDGRFIDEIGYYNPIAEP---AEIKIDVEKAKKWLSVGAQPSDTVKSLFRKEGII 80
BLAST of EL492543 vs. ExPASy Swiss-Prot
Match: RS16_THEPX (30S ribosomal protein S16 OS=Thermoanaerobacter sp. (strain X514) GN=rpsP PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 9.281e-17 Identity = 39/81 (48.15%), Postives = 57/81 (70.37%), Query Frame = 1 Query: 7 VVIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDCGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRAGLL 249 V IRL RFG K +PFYR++ ADSRSPRDG+ ++ +GYYNP+ + ++ ++ K WLSVGAQPSD V+ + + G++ Sbjct: 3 VRIRLKRFGAKKRPFYRIVVADSRSPRDGRFIDEIGYYNPIAQP---AEIKIDVEKAKKWLSVGAQPSDTVKSLFKKEGII 80
BLAST of EL492543 vs. ExPASy Swiss-Prot
Match: RS16_THEP3 (30S ribosomal protein S16 OS=Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) GN=rpsP PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 9.281e-17 Identity = 39/81 (48.15%), Postives = 57/81 (70.37%), Query Frame = 1 Query: 7 VVIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDCGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRAGLL 249 V IRL RFG K +PFYR++ ADSRSPRDG+ ++ +GYYNP+ + ++ ++ K WLSVGAQPSD V+ + + G++ Sbjct: 3 VRIRLKRFGAKKRPFYRIVVADSRSPRDGRFIDEIGYYNPIAQP---AEIKIDVEKAKKWLSVGAQPSDTVKSLFKKEGII 80
BLAST of EL492543 vs. ExPASy Swiss-Prot
Match: RS16_RICTY (30S ribosomal protein S16 OS=Rickettsia typhi GN=rpsP PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 9.281e-17 Identity = 40/83 (48.19%), Postives = 58/83 (69.88%), Query Frame = 1 Query: 7 VVIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDCGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRAGLLPP 255 V IRLAR G K +PFYRV+ A++ +PRDG LE +G YNP+ D +R+ L DR++YWLS GA+P++ V + + +AG+ P Sbjct: 3 VKIRLARGGAKKRPFYRVVIANATAPRDGDFLEKVGTYNPMLASDNSERVVLKKDRIEYWLSTGAKPTERVAKFIEKAGVTLP 85
BLAST of EL492543 vs. ExPASy Swiss-Prot
Match: RS16_PELUB (30S ribosomal protein S16 OS=Pelagibacter ubique GN=rpsP PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 9.281e-17 Identity = 40/84 (47.62%), Postives = 58/84 (69.05%), Query Frame = 1 Query: 7 VVIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDCGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRAGLLPPP 258 + IRL+R G K +P Y+V+ ADSR RDG+ +E +G++NPL +D +R+GL +R+KYWL GAQP+ V RIL G++ P Sbjct: 2 IKIRLSRGGTKKRPVYKVVIADSRRARDGRFIEKVGFFNPLLPKDKKERVGLEAERIKYWLGQGAQPTTRVARILGENGIIAMP 85
BLAST of EL492543 vs. ExPASy Swiss-Prot
Match: RS16_THERP (30S ribosomal protein S16 OS=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) GN=rpsP PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 1.212e-16 Identity = 39/83 (46.99%), Postives = 59/83 (71.08%), Query Frame = 1 Query: 7 VVIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDCGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRAGLLPP 255 + +RL R G K +P YR++AA++R PRDG+ +EV+GYYNP + + +N +R ++WL GAQP+D V+ +L RAG+LPP Sbjct: 2 IKLRLRRMGKKRQPHYRIVAAEARWPRDGRFIEVIGYYNP---RTDPYTLEVNVERARWWLEHGAQPTDTVRALLVRAGVLPP 81
BLAST of EL492543 vs. ExPASy Swiss-Prot
Match: RS16_STRSV (30S ribosomal protein S16 OS=Streptococcus sanguinis (strain SK36) GN=rpsP PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 1.212e-16 Identity = 43/81 (53.09%), Postives = 55/81 (67.90%), Query Frame = 1 Query: 7 VVIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDCGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRAGLL 249 V IRL R G K KPFYR+ ADSRSPRDG+ +E +G YNPL ++ ++ L DR+ WL GAQPSD V+ IL + G+L Sbjct: 3 VKIRLTRMGSKKKPFYRINVADSRSPRDGRFIETVGTYNPLVAEN---QVTLKEDRILEWLGNGAQPSDTVRNILSKEGVL 80
BLAST of EL492543 vs. ExPASy Swiss-Prot
Match: RS16_ROSCS (30S ribosomal protein S16 OS=Roseiflexus castenholzii (strain DSM 13941 / HLO8) GN=rpsP PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 1.212e-16 Identity = 41/81 (50.62%), Postives = 57/81 (70.37%), Query Frame = 1 Query: 7 VVIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDCGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRAGLL 249 V IRL R G KP YR++ ADSR+PRDG+ +E++G+YNP+ K + + DRV+YWL VGAQPS+ V R+L + G+L Sbjct: 2 VTIRLRRTGKTKKPSYRLVVADSRAPRDGRFIEIVGHYNPVRQP---KELNVKADRVRYWLGVGAQPSETVVRLLKQVGVL 79
BLAST of EL492543 vs. ExPASy Swiss-Prot
Match: RS16_LACLM (30S ribosomal protein S16 OS=Lactococcus lactis subsp. cremoris (strain MG1363) GN=rpsP PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 1.212e-16 Identity = 43/81 (53.09%), Postives = 57/81 (70.37%), Query Frame = 1 Query: 7 VVIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDCGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRAGLL 249 V IRL R G K KPFYR+ ADSR+PRDGK +E +G YNPL ++ ++ L +RV WLS GAQPSD V+ +L +AG++ Sbjct: 3 VKIRLTRMGSKKKPFYRINVADSRAPRDGKFIETVGTYNPLVTEN---QVTLKEERVLEWLSNGAQPSDTVRNLLSKAGVM 80
BLAST of EL492543 vs. ExPASy Swiss-Prot
Match: RS16_HERA2 (30S ribosomal protein S16 OS=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) GN=rpsP PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 1.212e-16 Identity = 44/81 (54.32%), Postives = 56/81 (69.14%), Query Frame = 1 Query: 7 VVIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDCGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRAGLL 249 V IRL R G K+KP YRV+ ADS +PRDGK +E +G+YNP Q K + + DR +YWLSVGAQPSD V R+L G++ Sbjct: 2 VRIRLRRMGMKHKPAYRVVIADSHAPRDGKFIETIGHYNP---QAQPKVVFIKEDRARYWLSVGAQPSDTVVRLLKNLGVV 79 The following BLAST results are available for this feature:
BLAST of EL492543 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >EL492543 ID=EL492543; Name=EL492543; organism=Citrus sinensis; type=EST; length=259bpback to top |