CX046757

Overview
NameCX046757
Unique NameCX046757
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length467
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CX046757_ssr383 microsatellite CX046757_ssr383:383..392. BLAST: Citrus ESTs to Prunus persica proteins V1
CX046757_ssr393 microsatellite CX046757_ssr393:393..414. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of CX046757 vs. ExPASy Swiss-Prot
Match: PIMT_PSEA8 (Protein-L-isoaspartate O-methyltransferase OS=Pseudomonas aeruginosa (strain LESB58) GN=pcm PE=3 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 5.908e-11
Identity = 37/70 (52.86%), Postives = 47/70 (67.14%), Query Frame = 3
Query:    3 GWPEFAPYDAIHVGAAAPEIPQALIDQLKPGGRMVIPV-GNIFQDLKVVDKNQDGSLSIWSETSVRYVPL 209
            GW   APY+ I V AAA E+PQ+L+DQL PGGR+VIPV G   Q L ++ + +DG  S     SVR+VPL
Sbjct:  137 GWSALAPYNGIIVTAAATEVPQSLLDQLAPGGRLVIPVGGGEVQQLMLIVRTEDG-FSRQVLDSVRFVPL 205          
BLAST of CX046757 vs. ExPASy Swiss-Prot
Match: PIMT_PSEA7 (Protein-L-isoaspartate O-methyltransferase OS=Pseudomonas aeruginosa (strain PA7) GN=pcm PE=3 SV=2)

HSP 1 Score: 66.6254 bits (161), Expect = 5.908e-11
Identity = 37/70 (52.86%), Postives = 47/70 (67.14%), Query Frame = 3
Query:    3 GWPEFAPYDAIHVGAAAPEIPQALIDQLKPGGRMVIPV-GNIFQDLKVVDKNQDGSLSIWSETSVRYVPL 209
            GW   APY+ I V AAA E+PQ+L+DQL PGGR+VIPV G   Q L ++ + +DG  S     SVR+VPL
Sbjct:  137 GWSALAPYNGIIVTAAASEVPQSLLDQLAPGGRLVIPVGGGEVQQLMLIVRTEDG-FSRQVLDSVRFVPL 205          
BLAST of CX046757 vs. ExPASy Swiss-Prot
Match: PIMT_AERPE (Protein-L-isoaspartate O-methyltransferase OS=Aeropyrum pernix GN=pcm PE=3 SV=2)

HSP 1 Score: 66.6254 bits (161), Expect = 5.908e-11
Identity = 34/80 (42.50%), Postives = 46/80 (57.50%), Query Frame = 3
Query:    3 GWPEFAPYDAIHVGAAAPEIPQALIDQLKPGGRMVIPVGN-IFQDLKVVDKNQDGSLSIWSETSVRYVPLTSRDAQLRGW 239
            G P+ APY  I V AAAP+ P+ L++QL PGGRMVIP+G    Q L +++K  DG +    +  V +VPL         W
Sbjct:  172 GLPQHAPYHRIKVAAAAPKPPKPLVEQLAPGGRMVIPIGTPDLQILTIIEKTPDGRVRERRDIEVLFVPLIGEHGYREDW 251          
BLAST of CX046757 vs. ExPASy Swiss-Prot
Match: PIMT_PSEPF (Protein-L-isoaspartate O-methyltransferase OS=Pseudomonas fluorescens (strain Pf0-1) GN=pcm PE=3 SV=2)

HSP 1 Score: 66.2402 bits (160), Expect = 7.716e-11
Identity = 36/70 (51.43%), Postives = 48/70 (68.57%), Query Frame = 3
Query:    3 GWPEFAPYDAIHVGAAAPEIPQALIDQLKPGGRMVIPVGN-IFQDLKVVDKNQDGSLSIWSETSVRYVPL 209
            GWP  APY+ I V A A ++PQAL+DQL PGGRMVIPVG+   Q L ++ + ++G  S     +VR+VPL
Sbjct:  137 GWPALAPYNGIIVTAVATDVPQALLDQLAPGGRMVIPVGSGEVQQLMLIVREENG-FSRHVLGAVRFVPL 205          
BLAST of CX046757 vs. ExPASy Swiss-Prot
Match: PIMT_GEOLS (Protein-L-isoaspartate O-methyltransferase OS=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) GN=pcm PE=3 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 7.716e-11
Identity = 37/80 (46.25%), Postives = 49/80 (61.25%), Query Frame = 3
Query:    3 GWPEFAPYDAIHVGAAAPEIPQALIDQLKPGGRMVIPVGN-IFQDLKVVDKNQDGSLSIWSETSVRYVPLTSRDAQLRGW 239
            GWPE  P+DAI V A AP +P+ L  QL PGGR+VIPVG+   Q L  + K  DG+L+  +    R+VPL  +    +GW
Sbjct:  138 GWPEEGPFDAILVTAGAPAVPETLAAQLAPGGRLVIPVGDESNQTLLRIRKAADGTLTQETGIGCRFVPLIGQ----QGW 213          
BLAST of CX046757 vs. ExPASy Swiss-Prot
Match: PIMT_DESPS (Protein-L-isoaspartate O-methyltransferase OS=Desulfotalea psychrophila GN=pcm PE=3 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 7.716e-11
Identity = 41/80 (51.25%), Postives = 47/80 (58.75%), Query Frame = 3
Query:    3 GWPEFAPYDAIHVGAAAPEIPQALIDQLKPGGRMVIPVGNIF-QDLKVVDKNQDGSLSIWSETSVRYVPLTSRDAQLRGW 239
            GW EFAPYDAI V A +PEIP  L+DQL  GGRMVIPVG  + Q LK V K  D    +     VR+V L      + GW
Sbjct:  139 GWSEFAPYDAIIVTAGSPEIPTPLLDQLADGGRMVIPVGPRYEQVLKRVTKEGD-DFVVEDLAPVRFVDLVG----VHGW 213          
The following BLAST results are available for this feature:
BLAST of CX046757 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 56
Match NameE-valueIdentityDescription
PIMT_PSEA85.908e-1152.86Protein-L-isoaspartate O-methyltransferase OS=Pseu... [more]
PIMT_PSEA75.908e-1152.86Protein-L-isoaspartate O-methyltransferase OS=Pseu... [more]
PIMT_AERPE5.908e-1142.50Protein-L-isoaspartate O-methyltransferase OS=Aero... [more]
PIMT_PSEPF7.716e-1151.43Protein-L-isoaspartate O-methyltransferase OS=Pseu... [more]
PIMT_GEOLS7.716e-1146.25Protein-L-isoaspartate O-methyltransferase OS=Geob... [more]
PIMT_DESPS7.716e-1151.25Protein-L-isoaspartate O-methyltransferase OS=Desu... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_10A06_g Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-10A06-B11-1-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX046757 ID=CX046757; Name=CX046757; organism=Citrus sinensis; type=EST; length=467bp
AAGGTTGGCCAGAGTTTGCTCCCTATGATGCAATACATGTTGGAGCAGCA
GCCCCAGAAATTCCTCAGGCACTTATTGACCAGTTGAAACCTGGAGGCAG
AATGGTGATTCCAGTTGGTAATATATTTCAGGATTTGAAGGTGGTTGACA
AGAACCAAGATGGCTCTCTTAGCATCTGGAGTGAAACCTCTGTTCGTTAT
GTCCCTCTTACCAGTCGGGATGCCCAGTTGCGGGGCTGGTGAGGTTGATT
TCTTTTTCACTTGAAGATGGTTGGCAAGCTTTTGGTTATAGGACCAGGTT
GGAATGTGGAACAGAATCTCACTCTAATCCAGTATCATTGTGGGTTTTTT
TGGTTTTTTTTTCTCCTCTAAATTTCCTTGTATGTGTGTGTGTATATATA
TATATATATATATAATAAGCAAGTTATGCAAGGTTGTCTAGTTTCCATTC
NAAAAAAAAAAAAAAAA
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