FC871917
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC871917 vs. ExPASy Swiss-Prot
Match: SC61G_MOUSE (Protein transport protein Sec61 subunit gamma OS=Mus musculus GN=Sec61g PE=2 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 7.854e-13 Identity = 38/67 (56.72%), Postives = 42/67 (62.69%), Query Frame = 3 Query: 24 MDAIDNVFDPLRDFAKDSLRLVKRCHKPDRKEFTKVAFRTAIXXXXXXXXXXXXKLIFIPINNIIVG 224 MD + +P R F KDS+RLVKRC KPDRKEF K+A TAI KLI IPINNIIVG Sbjct: 1 MDQVMQFVEPSRQFVKDSIRLVKRCTKPDRKEFQKIAMATAIGFAIMGFIGFFVKLIHIPINNIIVG 67
BLAST of FC871917 vs. ExPASy Swiss-Prot
Match: SC61G_HUMAN (Protein transport protein Sec61 subunit gamma OS=Homo sapiens GN=SEC61G PE=2 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 7.854e-13 Identity = 38/67 (56.72%), Postives = 42/67 (62.69%), Query Frame = 3 Query: 24 MDAIDNVFDPLRDFAKDSLRLVKRCHKPDRKEFTKVAFRTAIXXXXXXXXXXXXKLIFIPINNIIVG 224 MD + +P R F KDS+RLVKRC KPDRKEF K+A TAI KLI IPINNIIVG Sbjct: 1 MDQVMQFVEPSRQFVKDSIRLVKRCTKPDRKEFQKIAMATAIGFAIMGFIGFFVKLIHIPINNIIVG 67
BLAST of FC871917 vs. ExPASy Swiss-Prot
Match: SC61G_CANFA (Protein transport protein Sec61 subunit gamma OS=Canis familiaris GN=SEC61G PE=1 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 7.854e-13 Identity = 38/67 (56.72%), Postives = 42/67 (62.69%), Query Frame = 3 Query: 24 MDAIDNVFDPLRDFAKDSLRLVKRCHKPDRKEFTKVAFRTAIXXXXXXXXXXXXKLIFIPINNIIVG 224 MD + +P R F KDS+RLVKRC KPDRKEF K+A TAI KLI IPINNIIVG Sbjct: 1 MDQVMQFVEPSRQFVKDSIRLVKRCTKPDRKEFQKIAMATAIGFAIMGFIGFFVKLIHIPINNIIVG 67
BLAST of FC871917 vs. ExPASy Swiss-Prot
Match: SC61G_BOVIN (Protein transport protein Sec61 subunit gamma OS=Bos taurus GN=SEC61G PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 7.854e-13 Identity = 38/67 (56.72%), Postives = 42/67 (62.69%), Query Frame = 3 Query: 24 MDAIDNVFDPLRDFAKDSLRLVKRCHKPDRKEFTKVAFRTAIXXXXXXXXXXXXKLIFIPINNIIVG 224 MD + +P R F KDS+RLVKRC KPDRKEF K+A TAI KLI IPINNIIVG Sbjct: 1 MDQVMQFVEPSRQFVKDSIRLVKRCTKPDRKEFQKIAMATAIGFAIMGFIGFFVKLIHIPINNIIVG 67
BLAST of FC871917 vs. ExPASy Swiss-Prot
Match: SC61G_CIOIN (Protein transport protein Sec61 subunit gamma OS=Ciona intestinalis GN=SEC61G PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.340e-12 Identity = 39/68 (57.35%), Postives = 44/68 (64.71%), Query Frame = 3 Query: 24 MDAIDNVFDPLRDFAKDSLRLVKRCHKPDRKEFTKVAFRTAIXXXXXXXXXXXXKLIFIPINNIIVGS 227 MD + +P + FAKDS+RLVKRC KPDRKEF K+A TAI KLI IPINNIIVGS Sbjct: 1 MDQVMAWVEPGKQFAKDSIRLVKRCTKPDRKEFQKIAVATAIGFAIMGFIGFFVKLIHIPINNIIVGS 68
BLAST of FC871917 vs. ExPASy Swiss-Prot
Match: SC61G_CAEEL (Protein transport protein Sec61 subunit gamma OS=Caenorhabditis elegans GN=emo-1 PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.340e-12 Identity = 37/68 (54.41%), Postives = 43/68 (63.24%), Query Frame = 3 Query: 24 MDAIDNVFDPLRDFAKDSLRLVKRCHKPDRKEFTKVAFRTAIXXXXXXXXXXXXKLIFIPINNIIVGS 227 MD + +P R F+KDS RLVKRC KPDRKE+ K+A TAI KLI IPINNIIVG+ Sbjct: 1 MDQFQALIEPARQFSKDSYRLVKRCTKPDRKEYQKIAMATAIGFAIMGFIGFFVKLIHIPINNIIVGA 68
BLAST of FC871917 vs. ExPASy Swiss-Prot
Match: SC61G_DICDI (Protein transport protein Sec61 subunit gamma OS=Dictyostelium discoideum GN=sec61g PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 7.351e-11 Identity = 33/67 (49.25%), Postives = 42/67 (62.69%), Query Frame = 3 Query: 24 MDAIDNVFDPLRDFAKDSLRLVKRCHKPDRKEFTKVAFRTAIXXXXXXXXXXXXKLIFIPINNIIVG 224 MD ++ PL+DFAK+S+RL K+C KPD +EF K+A T I KLI IPINNI+VG Sbjct: 1 MDILEETAAPLKDFAKNSIRLFKKCTKPDAQEFQKIALATLIGFAIMGFIGFFVKLIHIPINNILVG 67 The following BLAST results are available for this feature:
BLAST of FC871917 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 17
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Sequences
The
following sequences are available for this feature:
EST sequence >FC871917 ID=FC871917; Name=FC871917; organism=Citrus sinensis; type=EST; length=650bpback to top |