CX043284

Overview
NameCX043284
Unique NameCX043284
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length770
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CX043284_ssr436 microsatellite CX043284_ssr436:436..447. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig723 contig Csv1_Contig723:5..774. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX043284 vs. ExPASy Swiss-Prot
Match: AQP2_ORYAF (Aquaporin-2 (Fragment) OS=Orycteropus afer GN=AQP2 PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 9.002e-12
Identity = 40/101 (39.60%), Postives = 58/101 (57.43%), Query Frame = 3
Query:  150 KAALAEFFSMIIFVFAGQGSGMAFSKLTDGGASTPAGLISASLAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITLLRSILYWIAQLLGSVVACLLL 452
            KA  +EF + ++FVF G GS + + +      + P+GL   ++A   A+   V    +ISG H+NPAVT    VG H++ LR+I Y  AQLLG+V    LL
Sbjct:    6 KAVFSEFLATLLFVFFGLGSALNWPQ------ALPSGL-QIAMAFGLAIGTLVQTLGHISGAHINPAVTVACLVGCHVSFLRAIFYVAAQLLGAVAGAALL 99          
BLAST of CX043284 vs. ExPASy Swiss-Prot
Match: AQP9_MOUSE (Aquaporin-9 OS=Mus musculus GN=Aqp9 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.176e-11
Identity = 68/236 (28.81%), Postives = 104/236 (44.07%), Query Frame = 3
Query:  150 KAALAEFFSMIIFVFAGQGSGMAFSKLTDGGASTPAGLISASLAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITLLRSILYWIAQLLGSVVACL---------LLKFSTG-----GLETSAFALSS----GVSSWNAVVFEIVMTFGLVYTVYATAVDPKKGNLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGP----AVVSWTWTTH-------WVYWLGPFIGA 770
            K  L+EF    I +  G GS +A + L+   A    G+I+ ++  A A+ +A+     +SGGH+NPAV+F     G +   +   Y  AQLLG+ V            L+ F+ G     G   +AF  ++     VS   A V ++V T  L+  V+A       G    + PI IG ++     + G   G +MNPA    P    A+  W +          W+  +GP IGA
Sbjct:   24 KETLSEFLGTFIMIVLGCGS-IAQAVLSREKAG---GIITINIGFATAVVMALYATFGVSGGHINPAVSFAMCTFGRMEWFKFPFYVGAQLLGAFVGAATVFGIYYDGLMAFADGKLLITGENGTAFIFATYPKPFVSVPGAFVDQVVSTMFLLLIVFAIFDSRNLGVPRGLEPIVIGLLIIVISCSLGLNSGCAMNPARDLSPRLFTALAGWGFEVFTFGNNFWWIPVVGPMIGA 255          
BLAST of CX043284 vs. ExPASy Swiss-Prot
Match: AQP2_DASNO (Aquaporin-2 (Fragment) OS=Dasypus novemcinctus GN=AQP2 PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.619e-11
Identity = 37/101 (36.63%), Postives = 56/101 (55.45%), Query Frame = 3
Query:  150 KAALAEFFSMIIFVFAGQGSGMAFSKLTDGGASTPAGLISASLAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITLLRSILYWIAQLLGSVVACLLL 452
            +A LAEF + +IFVF G GS +++ +           ++  +LA   A+   V    ++SG H+NPAVT    VG H++ LR+  Y  AQLLG+V    +L
Sbjct:    6 RAVLAEFLATLIFVFFGLGSALSWPQALPS-------VLQIALAFGLAIGTLVQALGHVSGAHINPAVTVACLVGCHVSFLRAAFYVAAQLLGAVAGAAIL 99          
BLAST of CX043284 vs. ExPASy Swiss-Prot
Match: AQP2_TALEU (Aquaporin-2 (Fragment) OS=Talpa europaea GN=AQP2 PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 4.468e-11
Identity = 39/101 (38.61%), Postives = 57/101 (56.44%), Query Frame = 3
Query:  150 KAALAEFFSMIIFVFAGQGSGMAFSKLTDGGASTPAGLISASLAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITLLRSILYWIAQLLGSVVACLLL 452
            +A  AEF + +IFVF G GS + + +      S P+ ++  ++A   A+   V    +ISG H+NPAVT    VG H++ LR+  Y  AQLLG+V    LL
Sbjct:    6 RAVFAEFLATLIFVFFGLGSALNWQQ------SLPS-VLQIAMAFGLAIGTLVQALGHISGAHINPAVTVACLVGCHVSFLRAAFYVAAQLLGAVAGAALL 99          
BLAST of CX043284 vs. ExPASy Swiss-Prot
Match: AQP2_PROHA (Aquaporin-2 (Fragment) OS=Procavia capensis habessinica GN=AQP2 PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 4.468e-11
Identity = 36/101 (35.64%), Postives = 56/101 (55.45%), Query Frame = 3
Query:  150 KAALAEFFSMIIFVFAGQGSGMAFSKLTDGGASTPAGLISASLAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITLLRSILYWIAQLLGSVVACLLL 452
            +A L+EF + ++FVF G GS + + +           ++  ++A   A+   V    +ISG H+NPAVT    VG H++ LR++ Y  AQLLG+V    LL
Sbjct:    6 RAVLSEFLATLLFVFFGLGSALNWPQALPS-------VLQIAMAFGLAIGTLVQTLGHISGAHINPAVTIACLVGCHVSFLRALFYLAAQLLGAVAGAALL 99          
BLAST of CX043284 vs. ExPASy Swiss-Prot
Match: AQP_ENTBH (Aquaporin OS=Enterocytozoon bieneusi (strain H348) GN=AQP PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 5.835e-11
Identity = 59/224 (26.34%), Postives = 94/224 (41.96%), Query Frame = 3
Query:  162 AEFFSMIIFVFAGQGSGMAFSKLTDGGASTPAGLI----SASLAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITLLRSILYWIAQLLGSVVACLL--LKFSTGGLETSAF----ALSSGVSSWNAVVFEIVMTFGLVYTVYATAVDP------------KKGNLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSWTWTTHWVYWLGPFIG 767
            AE     IF FA   + +         +ST  GL     S SL + F          + S  H NPA+T  A   G + +L  I Y IAQL+G ++A LL  + F  G L+T  F     +S  +S+ N    E +++F LV+  +   ++             K+ +    AP+ IG  +G          G + NP + +GPA++   +    +Y +    G
Sbjct:   14 AEMLCSCIFGFAVYSAILNTKASNSSISSTTVGLTVCFSSISLIYTFC---------DHSVAHFNPAITIAAICTGKLDILLGIGYVIAQLIGFILATLLTVVCFPYGYLKTMEFIASARISDDISTVNLFFTEFILSFILVFIAFEVGINAIREPGVTLFVGIKQIDRSKFAPLTIGITLGFLAFLASTTSGGAFNPGIVWGPAIMGGNFDDFVIYIISELSG 228          
BLAST of CX043284 vs. ExPASy Swiss-Prot
Match: AQP9_RAT (Aquaporin-9 OS=Rattus norvegicus GN=Aqp9 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 7.621e-11
Identity = 65/236 (27.54%), Postives = 103/236 (43.64%), Query Frame = 3
Query:  150 KAALAEFFSMIIFVFAGQGSGMAFSKLTDGGASTPAGLISASLAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITLLRSILYWIAQLLGSVVACL---------LLKFSTG-----GLETSAFALSS----GVSSWNAVVFEIVMTFGLVYTVYATAVDPKKGNLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGP----AVVSWTWTTH-------WVYWLGPFIGA 770
            K  L+EF    I +  G  S +A + L+        G+I+ ++  A A+ +A+ V   ISGGH+NPAV+F     G +   +   Y  AQ LG+ V            L+ F+ G     G   +AF  ++     +S+  A V ++V T  L+  V+A       G    + P+ IG ++     + G   G +MNPA    P    A+  W +          W+  +GP IGA
Sbjct:   24 KETLSEFLGTFIMIVLGCSS-IAQAVLS---RERFGGIITINIGFASAVVMALYVTFGISGGHINPAVSFAMCAFGRMEWFKFPFYVGAQFLGAFVGAATVFGIYYDGLMAFAGGKLLVVGENATAFIFATYPAPFISTPGAFVDQVVSTMFLLLIVFAMFDSRNLGVPRGLEPVVIGLLIIVLSCSLGLNSGCAMNPARDLSPRLFTALAGWGFEVFTVGNNFWWIPVVGPMIGA 255          
BLAST of CX043284 vs. ExPASy Swiss-Prot
Match: AQP2_HORSE (Aquaporin-2 (Fragment) OS=Equus caballus GN=AQP2 PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 9.953e-11
Identity = 36/101 (35.64%), Postives = 55/101 (54.46%), Query Frame = 3
Query:  150 KAALAEFFSMIIFVFAGQGSGMAFSKLTDGGASTPAGLISASLAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITLLRSILYWIAQLLGSVVACLLL 452
            +A LAEF + ++FVF G GS + + +           ++  ++A   A+   V    ++SG H+NPAVT    VG H++ LR+  Y  AQLLG+V    LL
Sbjct:    6 RAVLAEFLATLLFVFFGLGSALNWPQAMPS-------VLQIAMAFGLAIGTLVQALGHVSGAHINPAVTVACLVGCHVSFLRAAFYVAAQLLGAVAGAALL 99          
The following BLAST results are available for this feature:
BLAST of CX043284 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 198
Match NameE-valueIdentityDescription
AQP2_ORYAF9.002e-1239.60Aquaporin-2 (Fragment) OS=Orycteropus afer GN=AQP2... [more]
AQP9_MOUSE1.176e-1128.81Aquaporin-9 OS=Mus musculus GN=Aqp9 PE=2 SV=1[more]
AQP2_DASNO2.619e-1136.63Aquaporin-2 (Fragment) OS=Dasypus novemcinctus GN=... [more]
AQP2_TALEU4.468e-1138.61Aquaporin-2 (Fragment) OS=Talpa europaea GN=AQP2 P... [more]
AQP2_PROHA4.468e-1135.64Aquaporin-2 (Fragment) OS=Procavia capensis habess... [more]
AQP_ENTBH5.835e-1126.34Aquaporin OS=Enterocytozoon bieneusi (strain H348)... [more]
AQP9_RAT7.621e-1127.54Aquaporin-9 OS=Rattus norvegicus GN=Aqp9 PE=2 SV=1[more]
AQP2_HORSE9.953e-1135.64Aquaporin-2 (Fragment) OS=Equus caballus GN=AQP2 P... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_10A11_g Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-10A11-B22-1-6.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043284 ID=CX043284; Name=CX043284; organism=Citrus sinensis; type=EST; length=770bp
AACGGAGCACAAAACAGAGCCAGCAAGCTTGTAAGAAGCCTTTTGAGCTA
AAACAATATCGTTTTTCTTTGACAAAATTTTCGATAAAAATGCCAATCTA
CAGAATTGCCATCGGCACGCCGGGAGAGGCAAGCCATCCTGATGCGTTAA
AGGCGGCTCTAGCTGAGTTTTTCTCGATGATTATTTTTGTTTTCGCCGGC
CAGGGATCCGGGATGGCCTTTAGCAAGCTAACGGATGGCGGGGCGTCCAC
GCCGGCCGGTCTTATATCTGCATCACTGGCTCATGCATTTGCCCTATTTG
TAGCTGTTTCAGTTGGTGCAAATATTTCTGGGGGTCACGTGAACCCAGCT
GTGACATTTGGTGCATTTGTTGGAGGCCACATTACATTGTTGAGGAGCAT
CCTGTATTGGATTGCACAGTTGCTAGGATCAGTTGTTGCTTGCTTGCTGC
TCAAGTTTTCCACCGGTGGATTGGAAACATCGGCATTCGCACTATCATCT
GGCGTCTCATCATGGAATGCAGTTGTCTTTGAGATTGTGATGACCTTTGG
CTTGGTCTACACAGTGTATGCAACAGCAGTGGATCCAAAGAAGGGAAATC
TGGGCACTATTGCACCAATTGCAATCGGTTTCATTGTTGGTGCCAACATT
TTGGCTGGTGGCGCTTTTGATGGTGCATCAATGAACCCAGCAGTCTCTTT
TGGCCCTGCTGTGGTTAGCTGGACTTGGACTACCCACTGGGTCTACTGGC
TTGGACCATTTATTGGCGCC
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