EY665717

Overview
NameEY665717
Unique NameEY665717
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length895
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665717 vs. ExPASy Swiss-Prot
Match: PEL20_ARATH (Probable pectate lyase 20 OS=Arabidopsis thaliana GN=At5g48900 PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 3.437e-16
Identity = 66/172 (38.37%), Postives = 84/172 (48.84%), Query Frame = 1
Query:  346 LAGQAEGFGRLAIGGLHGPLYHVTTLADDGP-----GSLREGCRMKEPLWIVFEVSGTIHLRSHLSVSSYKTIDGRGQRVKL-TGKGLRLKECEHVIICNLEF-ECGKG-----------------PDADAIQIKPKSKHIWIDRCSLRDYDDGLIDNHRKSTDITVSRGPF 789
            LA  A GFGR AIGG  G  Y V+   DD P     G+LR     +EPLWIVF+    I L+  L ++S+KTIDGRG  V +  G  + ++   ++II  +   +C                     D D I I   S HIWID  SL +  DGLID    ST IT+S   F
Sbjct:   88 LANCAIGFGRNAIGGRDGRYYVVSDPNDDNPVNPKPGTLRHAVIQEEPLWIVFKRDMVITLKEELIMNSFKTIDGRGVNVHIANGACITIQFVTNIIIHGIHIHDCRPTGNAMVRSSPSHYGWRTMADGDGISIF-GSSHIWIDHNSLSNCADGLIDAVMASTAITISNNYF 258          
BLAST of EY665717 vs. ExPASy Swiss-Prot
Match: MPAJ1_JUNVI (Major pollen allergen Jun v 1 OS=Juniperus virginiana PE=1 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 3.437e-16
Identity = 68/175 (38.86%), Postives = 87/175 (49.71%), Query Frame = 1
Query:  346 LAGQAEGFGRLAIGGLHGPLYHVTTLADDGP-----GSLREGCRMKEPLWIVFEVSGTIHLRSHLSVSSYKTIDGRGQRVKLTGKG--LRLKECEHVII-------CN--------LEFECGKGP----DADAIQIKPKSKHIWIDRCSLRDYDDGLIDNHRKSTDITVSRGPFF 792
            LA  A GFG   +GG  G  Y VT+ ADD P     G+LR G   ++ LWI+F  +  I L+  L V+ +KTIDGRG  V L   G  L +++  HVI+       CN        +    G  P    D DAI ++    + WID  SL D  DGLID    ST IT+S   FF
Sbjct:   42 LADCAVGFGSSTMGGKGGDFYTVTS-ADDNPVNPTPGTLRYGATREKTLWIIFSQNMNIKLKMPLYVAGHKTIDGRGADVHLGNGGPCLFMRKVSHVILHGLHIHGCNTSVLGDVLVSESIGVVPVHAQDGDAITMR-NVTNAWIDHNSLSDCSDGLIDVTLGSTGITISNNHFF 214          
BLAST of EY665717 vs. ExPASy Swiss-Prot
Match: PEL14_ARATH (Putative pectate lyase 14 OS=Arabidopsis thaliana GN=At4g13210 PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 5.862e-16
Identity = 65/170 (38.24%), Postives = 83/170 (48.82%), Query Frame = 1
Query:  340 RALAGQAEGFGRLAIGGLHGPLYHVTTLADDGP-----GSLREGCRMKEPLWIVFEVSGTIHLRSHLSVSSYKTIDGRGQRVKLTG--------------KGLRLKECE---HVIICNLEFECG--KGPDADAIQIKPKSKHIWIDRCSLRDYDDGLIDNHRKSTDITVS 777
            + LA  A GFGR A+GG  G  Y VT  +D  P     G+LR      EPLWIVF+    I L   L ++S+KTIDGRG  V + G               G+ + +C+   + ++ + E   G     D D I I   S HIWID  SL    DGLID    ST IT+S
Sbjct:   87 KRLADCAIGFGRNAVGGRDGRYYIVTDPSDHDPVTPKPGTLRYAVIQDEPLWIVFKRDMVITLSQELIMNSFKTIDGRGVNVHIAGGACLTVQYVTNIIIHGINIHDCKRTGNAMVRSSESHYGWRTMADGDGISIF-GSSHIWIDHNSLSSCADGLIDAIMGSTAITIS 255          
BLAST of EY665717 vs. ExPASy Swiss-Prot
Match: PEL3_ARATH (Probable pectate lyase 3 OS=Arabidopsis thaliana GN=AT59 PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.306e-15
Identity = 65/173 (37.57%), Postives = 87/173 (50.29%), Query Frame = 1
Query:  340 RALAGQAEGFGRLAIGGLHGPLYHVTTLADDG-----PGSLREGCRMKEPLWIVFEVSGTIHLRSHLSVSSYKTIDGRGQRVK-LTGKGLRLKECEHVIICNL---EFECGKG---PDADA-IQIKPKS----------KHIWIDRCSLRDYDDGLIDNHRKSTDITVSRGPF 789
            + LA    GFGR   GG  GP+Y V   +D+      PG+LR       PLWI+F  S  I L+  L ++S KTIDGRG RV  + G GL L+   +VII N+       G G    D++A I ++ KS           +IWID  S+    DG+ID    ST +T+S   F
Sbjct:  122 KKLADCVLGFGRRTTGGKDGPIYVVKDASDNDLINPKPGTLRHAVTRDGPLWIIFARSMIIKLQQELMITSDKTIDGRGARVYIMEGAGLTLQFVNNVIIHNIYVKHIVPGNGGLIRDSEAHIGLRTKSDGDGISLFGATNIWIDHVSMTRCADGMIDAIDGSTAVTISNSHF 294          
BLAST of EY665717 vs. ExPASy Swiss-Prot
Match: PEL10_ARATH (Probable pectate lyase 10 OS=Arabidopsis thaliana GN=At3g24670 PE=2 SV=2)

HSP 1 Score: 83.9593 bits (206), Expect = 1.306e-15
Identity = 65/170 (38.24%), Postives = 83/170 (48.82%), Query Frame = 1
Query:  340 RALAGQAEGFGRLAIGGLHGPLYHVTTLADDG-----PGSLREGCRMKEPLWIVFEVSGTIHLRSHLSVSSYKTIDGRGQRVKLTGKG-LRLKECEHVIICNLE-FECGKG-----------------PDADAIQIKPKSKHIWIDRCSLRDYDDGLIDNHRKSTDITVS 777
            + LA  A GFGR AIGG  G  Y VT  +D       PG+LR       PLWIVF+    I L   L ++S+KTIDGRG  V + G   + ++   ++II  +   +C +                   D DAI I   S HIWID  SL +  DGLID    ST IT+S
Sbjct:  109 KRLANCAIGFGRNAIGGRDGRYYVVTDPSDHDAVNPRPGTLRHAVIQDRPLWIVFKRDMVITLTQELIMNSFKTIDGRGVNVAIAGGACITIQYVTNIIIHGINVHDCRRTGNAMVRSSPSHYGWRTMADGDAISIF-GSSHIWIDHNSLSNCADGLIDAIMGSTAITIS 277          
BLAST of EY665717 vs. ExPASy Swiss-Prot
Match: PEL19_ARATH (Putative pectate lyase 19 OS=Arabidopsis thaliana GN=At5g15110 PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.909e-15
Identity = 58/166 (34.94%), Postives = 79/166 (47.59%), Query Frame = 1
Query:  364 GFGRLAIGGLHGPLYHVTTLADDG-----PGSLREGCRMKEPLWIVFEVSGTIHLRSHLSVSSYKTIDGRGQRVKLT-GKGLRLKECEHVIICNL------------------EFECGKGPDADAIQIKPKSKHIWIDRCSLRDYDDGLIDNHRKSTDITVSRGPF 789
            GFG    GG  G +Y VT+  D+      PG+LR     KEPLWI+F+   +I L   L ++S+KTID RG  V +  G G+ ++  ++VII  L                   F      D D + I   S +IW+D  S+    DGLID    ST IT+S   F
Sbjct:  147 GFGHRTTGGKRGRIYVVTSNLDEDMVNPKPGTLRHAVIQKEPLWIIFKNDMSIRLNQELLINSHKTIDARGANVHVAHGAGITMQFVKNVIIHGLHIHHISESSGGMIRDSVDHFGMRTRADGDGLSIY-GSSNIWLDHISMSKCQDGLIDAIVGSTGITISNSHF 311          
BLAST of EY665717 vs. ExPASy Swiss-Prot
Match: PEL7_ARATH (Probable pectate lyase 7 OS=Arabidopsis thaliana GN=At3g01270 PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.886e-14
Identity = 59/166 (35.54%), Postives = 77/166 (46.39%), Query Frame = 1
Query:  364 GFGRLAIGGLHGPLYHVTTLADDG-----PGSLREGCRMKEPLWIVFEVSGTIHLRSHLSVSSYKTIDGRGQRVKLT-GKGLRLKECEHVIICNL------------------EFECGKGPDADAIQIKPKSKHIWIDRCSLRDYDDGLIDNHRKSTDITVSRGPF 789
            GFG    GG  G +Y VT+  DD      PG+LR     KEPLWIVF+   +I L   L ++S KTID RG  V +  G G+ ++   ++II  L                   F      D D I I   + +IW+D  S+    DGLID    ST IT+S   F
Sbjct:  150 GFGYRTTGGKRGRIYVVTSPRDDDMVNPRPGTLRHAVIQKEPLWIVFKHDMSIRLSQELMITSDKTIDARGANVHIAYGAGITMQYVHNIIIHGLHVHHIVKSSGGLIRDSINHFGHRGEADGDGISIF-GATNIWLDHISMSKCQDGLIDAIMGSTAITISNSHF 314          
BLAST of EY665717 vs. ExPASy Swiss-Prot
Match: PEL_LILLO (Pectate lyase OS=Lilium longiflorum PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 3.217e-14
Identity = 61/163 (37.42%), Postives = 81/163 (49.69%), Query Frame = 1
Query:  361 EGFGRLAIGGLHGPLYHVTTLADDGP-----GSLREGCRMKEPLWIVFEVSGTIHLRSHLSVSSYKTIDGRGQRVKLTGKG-LRLKECEHVIICNL---EFECGKG---------------PDADAIQIKPKSKHIWIDRCSLRDYDDGLIDNHRKSTDITVS 777
            +GFGR   GG  G +Y VT  +DD       G+LR G     PLWI+F  S  I L+  L +++ KTIDGRG  V++ G   L ++   +VII  +   + + G+G                D D I I   S +IWID  SL    DGLID    ST IT+S
Sbjct:  110 KGFGRKTTGGAAGEIYVVTDPSDDSLTDPKFGTLRWGVIQDRPLWIIFGKSMVIRLKQELIINNDKTIDGRGANVQIAGGAQLTVQFVHNVIIHGIHIHDIKPGEGGLIRDSEKHSGIRTRSDGDGISI-IGSSNIWIDHVSLARCSDGLIDVILGSTAITIS 271          
The following BLAST results are available for this feature:
BLAST of EY665717 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 38
Match NameE-valueIdentityDescription
PEL20_ARATH3.437e-1638.37Probable pectate lyase 20 OS=Arabidopsis thaliana ... [more]
MPAJ1_JUNVI3.437e-1638.86Major pollen allergen Jun v 1 OS=Juniperus virgini... [more]
PEL14_ARATH5.862e-1638.24Putative pectate lyase 14 OS=Arabidopsis thaliana ... [more]
PEL3_ARATH1.306e-1537.57Probable pectate lyase 3 OS=Arabidopsis thaliana G... [more]
PEL10_ARATH1.306e-1538.24Probable pectate lyase 10 OS=Arabidopsis thaliana ... [more]
PEL19_ARATH2.909e-1534.94Putative pectate lyase 19 OS=Arabidopsis thaliana ... [more]
PEL7_ARATH1.886e-1435.54Probable pectate lyase 7 OS=Arabidopsis thaliana G... [more]
PEL_LILLO3.217e-1437.42Pectate lyase OS=Lilium longiflorum PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-102-092-G08-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665717 ID=EY665717; Name=EY665717; organism=Citrus sinensis; type=EST; length=895bp
CAGTACGGTCGGGATTCCGGGTCGACCCACGCGTCCGACTCTTCAATGAA
ACAGACAATAACTGTAACGAACGTTGATTAAATTTAGCTCGAAGCCATTG
GTCCGGTGAGTTTCAGTAACTCTCAACCATTAATATCAATGGGAAACTCA
CACGGGCATCATCATCATCATCGCAAGAACCGTAACGAAGCTAACAGTTA
CTTCCCACACCAAACGCCTACTCCTACCCCTCCGCCCTTTAAATTTGGCC
CGTCTGATCATCATCAACATCAACCTGCAGCACAATTTCAGAACAACTCG
ACGATGTCATTGCCTTACGCTCACGTTGATTGCAGCTTACGTGCTCTCGC
CGGCCAGGCCGAAGGGTTTGGTCGCCTCGCCATTGGTGGTCTCCACGGAC
CCCTCTACCACGTCACCACTTTAGCCGATGATGGGCCAGGATCACTTCGA
GAAGGATGCCGTATGAAAGAACCTCTTTGGATTGTCTTTGAAGTGTCAGG
CACCATTCATCTCCGCTCTCACTTGAGTGTCTCATCTTACAAAACCATAG
ATGGCCGAGGACAAAGGGTGAAACTTACAGGAAAGGGTTTGAGGCTGAAG
GAATGTGAACATGTTATAATATGCAATCTAGAGTTTGAATGTGGTAAAGG
ACCTGATGCTGATGCCATTCAAATAAAACCTAAGTCGAAACACATATGGA
TAGACCGTTGTAGTCTCCGTGATTATGATGATGGGCTGATAGATAATCAC
AGAAAAAGCACAGATATTACAGTTTCTAGGGGTCCCTTTTTCTTCTCATG
ACAAAAACATGCTCCTTGGAGCAAATCCCTCTCCCGTGGGGGAAAAATGT
ATTCCAAATGACCCTTCCTCATTGGTTTTTTTGAAGGGGAATCAA
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