CV998077

Overview
NameCV998077
Unique NameCV998077
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length832
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV998077 vs. ExPASy Swiss-Prot
Match: ALAT2_DANRE (Alanine aminotransferase 2-like OS=Danio rerio GN=gpt2l PE=2 SV=2)

HSP 1 Score: 223.787 bits (569), Expect = 9.440e-58
Identity = 122/266 (45.86%), Postives = 175/266 (65.79%), Query Frame = 1
Query:   43 ITVDSLNPKVLKCEYAVRGEIVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDG-FPADPNDIFLTDGASPAVHMMMQLLIRSEN---DGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVEFCKKEGLVLLADEVYQENVY 828
            +TVD++N  V K +YAVRG IV  A ++++EL+       FDE++  NIG+  ++GQ+PITFFR+V+ALC +P +LD ++    F  D+  RA +IL    G + GAY+ SQGI  +R  +A  IE RDG  P+DP++I+LT GAS  +  +++LL   E     G++  IPQYPLYSASIA  G   + YYL+E   W L+ SE+++ L+AA+ K    R L +INPGNPTGQV + +    +++F  KE L L+ADEVYQ+NVY
Sbjct:   74 LTVDTMNANVKKVDYAVRGPIVQRAVQIEKELKEGV-KKPFDEVIKANIGDAHAMGQRPITFFRQVMALCTYPQLLDDNK----FPEDAKNRARRILQSCGGNSIGAYTTSQGIDCVRQDVAKYIERRDGGIPSDPDNIYLTTGASDGIVTILKLLTAGEGLTRTGVMISIPQYPLYSASIAELGAVQINYYLNEEKCWSLDISELQRSLQAAR-KHCNPRVLCIINPGNPTGQVQSRQCIEDVIQFAAKENLFLMADEVYQDNVY 333          
BLAST of CV998077 vs. ExPASy Swiss-Prot
Match: ALAT2_MOUSE (Alanine aminotransferase 2 OS=Mus musculus GN=Gpt2 PE=2 SV=1)

HSP 1 Score: 213.772 bits (543), Expect = 9.769e-55
Identity = 117/265 (44.15%), Postives = 166/265 (62.64%), Query Frame = 1
Query:   43 ITVDSLNPKVLKCEYAVRGEIVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIR---SENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVEFCKKEGLVLLADEVYQENVY 828
            +T++S+NP+V   EYAVRG IV  A  ++ ELQ       F E++  NIG+  ++GQQPITF R+V+ALC +P++L+       F  D+ +RA +IL    G + G+YS SQG+  +R+ +AA I  RDG PADP++I+LT GAS  +  +++LL+        G++ PIPQYPLYSA I+      V YYLDE   W L   E+++ L  AK      + L +INPGNPTGQV + +    ++ F  +E L LLADEVYQ+NVY
Sbjct:   48 LTLESMNPQVKAVEYAVRGPIVLKAGEIEMELQRGI-KKPFTEVIRANIGDAHAMGQQPITFLRQVMALCTYPNLLNSPS----FPEDAKKRARRILQACGGNSLGSYSASQGVNCIREDVAAFITRRDGVPADPDNIYLTTGASDGISTILKLLVSGGGKSRTGVMIPIPQYPLYSAVISELDAVQVNYYLDEENCWALNVDELRRALRQAK-DHCDPKVLCIINPGNPTGQVQSRKCIEDVIHFAWEEKLFLLADEVYQDNVY 306          
BLAST of CV998077 vs. ExPASy Swiss-Prot
Match: ALAT2_HUMAN (Alanine aminotransferase 2 OS=Homo sapiens GN=GPT2 PE=1 SV=1)

HSP 1 Score: 211.075 bits (536), Expect = 6.332e-54
Identity = 117/266 (43.98%), Postives = 169/266 (63.53%), Query Frame = 1
Query:   43 ITVDSLNPKVLKCEYAVRGEIVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDG-FPADPNDIFLTDGASPAVHMMMQLLIRS---ENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVEFCKKEGLVLLADEVYQENVY 828
            +T++S+NP+V   EYAVRG IV  A  ++ ELQ       F E++  NIG+ Q++GQQPITF R+V+ALC +P++LD       F  D+ +RA +IL    G + G+YS SQG+  +R+ +AA I  RDG  PADP++I+LT GAS  +  ++++L+        G++ PIPQYPLYSA I+      V YYLDE   W L  +E+++ ++ AK      + L +INPGNPTGQV + +    ++ F  +E L LLADEVYQ+NVY
Sbjct:   48 LTLESMNPQVKAVEYAVRGPIVLKAGEIELELQRGI-KKPFTEVIRANIGDAQAMGQQPITFLRQVMALCTYPNLLDSPS----FPEDAKKRARRILQACGGNSLGSYSASQGVNCIREDVAAYITRRDGGVPADPDNIYLTTGASDGISTILKILVSGGGKSRTGVMIPIPQYPLYSAVISELDAIQVNYYLDEENCWALNVNELRRAVQEAKDH-CDPKVLCIINPGNPTGQVQSRKCIEDVIHFAWEEKLFLLADEVYQDNVY 307          
BLAST of CV998077 vs. ExPASy Swiss-Prot
Match: ALAT2_XENTR (Alanine aminotransferase 2 OS=Xenopus tropicalis GN=gpt2 PE=2 SV=1)

HSP 1 Score: 209.149 bits (531), Expect = 2.406e-53
Identity = 115/266 (43.23%), Postives = 171/266 (64.29%), Query Frame = 1
Query:   43 ITVDSLNPKVLKCEYAVRGEIVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDG-FPADPNDIFLTDGASPAVHMMMQLLIRSEND---GILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVEFCKKEGLVLLADEVYQENVY 828
            +T++S+NP + K EYAVRG IV  A  L++ELQ       F E++  NIG+  ++GQ+PITF R+V A+C +P +++ ++    F  D  ++A +IL    G + GAYS SQGI+ +R  +A  IE RDG   +DPN+I+L+ GAS ++  M++LL+  +     G+L PIPQYPLYSA++A      V YYLDE   W L+ +E+++ L  A+ K    + L +INPGNPTGQV + +    ++ F  +E L L+ADEVYQ+NVY
Sbjct:   49 LTLESMNPCIQKVEYAVRGPIVIRAVELEKELQQGV-KKPFTEVIKANIGDAHAMGQKPITFLRQVSAICLYPELMNDNK----FPEDVKQKAARILQACGGHSIGAYSASQGIEVIRQDVAKYIERRDGGIQSDPNNIYLSTGASDSIVTMLKLLVSGQGKSRTGVLIPIPQYPLYSAALAELNAVQVNYYLDEENCWALDINELRRSLTEAR-KHCDPKVLCIINPGNPTGQVQSRKCIEDVIRFAAEENLFLMADEVYQDNVY 308          
BLAST of CV998077 vs. ExPASy Swiss-Prot
Match: ALAT2_XENLA (Alanine aminotransferase 2 OS=Xenopus laevis GN=gpt2 PE=2 SV=1)

HSP 1 Score: 207.994 bits (528), Expect = 5.360e-53
Identity = 114/266 (42.86%), Postives = 171/266 (64.29%), Query Frame = 1
Query:   43 ITVDSLNPKVLKCEYAVRGEIVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDG-FPADPNDIFLTDGASPAVHMMMQLLIRSEND---GILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVEFCKKEGLVLLADEVYQENVY 828
            +T+DS+NP + K EYAVRG IV  A  L++ELQ       F E++  NIG+  ++GQ+P+TF R+V A+C +P +++ ++    F  D  ++A +IL    G + GAYS SQGI+ +R  +A  IE RDG   +DPN+I+L+ GAS ++  M++LL+  +     G++ PIPQYPLYSA++A      V YYLDE   W L+ +E+++ L  A+ K    + L +INPGNPTGQV + +    ++ F  +E L L+ADEVYQ+NVY
Sbjct:   65 LTLDSMNPCIQKVEYAVRGPIVIRAVELEKELQQGV-KKPFTEVIKANIGDAHAMGQKPVTFLRQVSAICLYPELMNDNK----FPEDVKQKAARILQACGGHSIGAYSASQGIEVIRQDVAKYIERRDGGILSDPNNIYLSTGASDSIVTMLKLLVSGQGKSRTGVMIPIPQYPLYSAALAELDAVQVNYYLDEENCWALDINELRRALAEAR-KHCDPKVLCIINPGNPTGQVQSRKCIEDVIRFAAEENLFLMADEVYQDNVY 324          
BLAST of CV998077 vs. ExPASy Swiss-Prot
Match: AAT_MYCTU (Probable aspartate aminotransferase OS=Mycobacterium tuberculosis GN=aspC PE=3 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 8.918e-24
Identity = 82/249 (32.93%), Postives = 116/249 (46.59%), Query Frame = 1
Query:   85 YAVRGEIVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPA-DPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVEFCKKEGLVLLADEVYQENVY 828
            Y +RG +   A RL+ E       H    IL  NIGNP   G +              P ++ R   Q L  A                    YS SQGI   R  +    E   GFP  D +D++L +G S  + M +Q L+    D +L P P YPL++AS +L GGT V Y  DE  GW  + ++++ ++          +ALVVINP NPTG V + E    +V+  +K  L+LLADE+Y + +Y
Sbjct:   39 YEIRGPVHQHAARLEAE------GH---RILKLNIGNPAPFGFEA-------------PDVIMRDIIQALPYAQG------------------YSDSQGILSARRAVVTRYELVPGFPRFDVDDVYLGNGVSELITMTLQALL-DNGDQVLIPSPDYPLWTASTSLAGGTPVHYLCDETQGWQPDIADLESKITER------TKALVVINPNNPTGAVYSCEILTQMVDLARKHQLLLLADEIYDKILY 240          
BLAST of CV998077 vs. ExPASy Swiss-Prot
Match: AAT_MYCBO (Probable aspartate aminotransferase OS=Mycobacterium bovis GN=aspC PE=3 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 8.918e-24
Identity = 82/249 (32.93%), Postives = 116/249 (46.59%), Query Frame = 1
Query:   85 YAVRGEIVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPA-DPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVEFCKKEGLVLLADEVYQENVY 828
            Y +RG +   A RL+ E       H    IL  NIGNP   G +              P ++ R   Q L  A                    YS SQGI   R  +    E   GFP  D +D++L +G S  + M +Q L+    D +L P P YPL++AS +L GGT V Y  DE  GW  + ++++ ++          +ALVVINP NPTG V + E    +V+  +K  L+LLADE+Y + +Y
Sbjct:   39 YEIRGPVHQHAARLEAE------GH---RILKLNIGNPAPFGFEA-------------PDVIMRDIIQALPYAQG------------------YSDSQGILSARRAVVTRYELVPGFPRFDVDDVYLGNGVSELITMTLQALL-DNGDQVLIPSPDYPLWTASTSLAGGTPVHYLCDETQGWQPDIADLESKITER------TKALVVINPNNPTGAVYSCEILTQMVDLARKHQLLLLADEIYDKILY 240          
BLAST of CV998077 vs. ExPASy Swiss-Prot
Match: Y286_HAEIN (Uncharacterized aminotransferase HI0286 OS=Haemophilus influenzae GN=HI0286 PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.165e-23
Identity = 82/261 (31.42%), Postives = 128/261 (49.04%), Query Frame = 1
Query:   58 LNPKVLKCE---YAVRGEIVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLG-QQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVEFCKKEGLVLLADEVYQENVY 828
            L PK  K E   Y +RG +   A RL++E          ++IL  NIGNP   G + P     +VL   + PS     +++GL+SA               +A   Y  S+GI G                A  ND+++ +G S  + M MQ L+ ++ D +L P+P YPL++A++ L GG  V Y  DE   W     ++K ++ A        +A+V+INP NPTG V ++E  + IVE  ++  L++ ADE+Y + +Y
Sbjct:    3 LFPKSDKLEHVCYDIRGPVHKEALRLEEE---------GNKILKLNIGNPAPFGFEAPDEILVDVLR--NLPSAQGYCDSKGLYSAR--------------KAIVQYYQSKGILG----------------ATVNDVYIGNGVSELITMAMQALL-NDGDEVLVPMPDYPLWTAAVTLSGGKAVHYLCDEDANWFPTIDDIKAKVNAK------TKAIVIINPNNPTGAVYSKELLQEIVEIARQNNLIIFADEIYDKILY 215          
BLAST of CV998077 vs. ExPASy Swiss-Prot
Match: YFBQ_SHIFL (Uncharacterized aminotransferase yfbQ OS=Shigella flexneri GN=yfbQ PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 7.812e-20
Identity = 68/248 (27.42%), Postives = 113/248 (45.56%), Query Frame = 1
Query:   85 YAVRGEIVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVEFCKKEGLVLLADEVYQENVY 828
            Y +RG ++  A+RL++E          +++L  NIGNP   G                            F A   E    ++  +P      Y  S+G+   R  I    +AR        DI++ +G S  +   MQ L+ S  D +L P P YPL++A+++L  G  V Y  DE++ W  +  +++ ++          R +V+INP NPTG V ++E    IVE  ++  L++ ADE+Y + +Y
Sbjct:   15 YDIRGPVLKEAKRLEEE---------GNKVLKLNIGNPAPFG----------------------------FDAPD-EILVDVIRNLP--TAQGYCDSKGLYSARKAIMQHYQARGMRDVTVEDIYIGNGVSELIVQAMQALLNS-GDEMLVPAPDYPLWTAAVSLSSGKAVHYLCDESSDWFPDLDDIRAKITPR------TRGIVIINPNNPTGAVYSKELLMEIVEIARQHNLIIFADEIYDKILY 215          
BLAST of CV998077 vs. ExPASy Swiss-Prot
Match: YFBQ_ECOLI (Uncharacterized aminotransferase yfbQ OS=Escherichia coli (strain K12) GN=yfbQ PE=1 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 7.812e-20
Identity = 68/248 (27.42%), Postives = 113/248 (45.56%), Query Frame = 1
Query:   85 YAVRGEIVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVEFCKKEGLVLLADEVYQENVY 828
            Y +RG ++  A+RL++E          +++L  NIGNP   G                            F A   E    ++  +P      Y  S+G+   R  I    +AR        DI++ +G S  +   MQ L+ S  D +L P P YPL++A+++L  G  V Y  DE++ W  +  +++ ++          R +V+INP NPTG V ++E    IVE  ++  L++ ADE+Y + +Y
Sbjct:   15 YDIRGPVLKEAKRLEEE---------GNKVLKLNIGNPAPFG----------------------------FDAPD-EILVDVIRNLP--TAQGYCDSKGLYSARKAIMQHYQARGMRDVTVEDIYIGNGVSELIVQAMQALLNS-GDEMLVPAPDYPLWTAAVSLSSGKAVHYLCDESSDWFPDLDDIRAKITPR------TRGIVIINPNNPTGAVYSKELLMEIVEIARQHNLIIFADEIYDKILY 215          
The following BLAST results are available for this feature:
BLAST of CV998077 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 40
Match NameE-valueIdentityDescription
ALAT2_DANRE9.440e-5845.86Alanine aminotransferase 2-like OS=Danio rerio GN=... [more]
ALAT2_MOUSE9.769e-5544.15Alanine aminotransferase 2 OS=Mus musculus GN=Gpt2... [more]
ALAT2_HUMAN6.332e-5443.98Alanine aminotransferase 2 OS=Homo sapiens GN=GPT2... [more]
ALAT2_XENTR2.406e-5343.23Alanine aminotransferase 2 OS=Xenopus tropicalis G... [more]
ALAT2_XENLA5.360e-5342.86Alanine aminotransferase 2 OS=Xenopus laevis GN=gp... [more]
AAT_MYCTU8.918e-2432.93Probable aspartate aminotransferase OS=Mycobacteri... [more]
AAT_MYCBO8.918e-2432.93Probable aspartate aminotransferase OS=Mycobacteri... [more]
Y286_HAEIN1.165e-2331.42Uncharacterized aminotransferase HI0286 OS=Haemoph... [more]
YFBQ_SHIFL7.812e-2027.42Uncharacterized aminotransferase yfbQ OS=Shigella ... [more]
YFBQ_ECOLI7.812e-2027.42Uncharacterized aminotransferase yfbQ OS=Escherich... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_CTMN-5_T3 Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07-153 Citrus sinensis cDNA clone TC05_E01_007, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV998077 ID=CV998077; Name=CV998077; organism=Citrus sinensis; type=EST; length=832bp
TCCCCTTCTTCTTCTTCAATGGCTCCCACCTCTTCTCCTGCTATCACGGT
CGATTCCCTTAACCCCAAGGTTCTAAAATGCGAGTATGCTGTTCGTGGTG
AGATTGTCTCCATTGCCCAGCGGTTGCAACAAGAGTTACAAACTAACCCT
GGCTCTCATTCCTTTGATGAGATACTGTACTGCAACATTGGAAATCCTCA
GTCTCTTGGTCAGCAGCCAATAACCTTTTTCCGAGAGGTTCTTGCATTAT
GTGACCATCCATCCATTTTGGACAGAAGTGAAACACAAGGTTTGTTCAGT
GCGGATTCTATAGAGCGAGCTTGGCAGATACTGGATCAAATTCCTGGGCG
AGCAACTGGGGCTTACAGTCATAGTCAGGGTATCAAGGGACTGCGTGATA
CAATCGCTGCTGGAATTGAGGCTCGTGATGGTTTTCCTGCTGATCCAAAT
GATATTTTCTTGACAGATGGTGCAAGTCCTGCTGTCCACATGATGATGCA
GTTATTGATAAGATCAGAGAACGATGGAATTCTCTGTCCTATTCCTCAGT
ACCCTTTATACTCTGCTTCAATTGCTCTCCATGGTGGGACCTTGGTGCCT
TACTACCTAGATGAAGCAACAGGATGGGGATTGGAAACTTCGGAGGTTAA
GAAGCAATTGGAGGCCGCCAAGGCCAAAGGTATTACCGTTAGGGCCTTGG
TTGTAATAAATCCAGGCAATCCAACTGGACAGGTTCTTGCTGAAGAAAAC
CAGCGTGCAATTGTGGAGTTCTGCAAAAAGGAGGGTCTTGTTCTTCTTGC
AGATGAGGTATACCAGGAAAATGTTTATGTGC
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