FC871916
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC871916 vs. ExPASy Swiss-Prot
Match: RL25_YEAST (60S ribosomal protein L25 OS=Saccharomyces cerevisiae GN=RPL25 PE=1 SV=4) HSP 1 Score: 138.272 bits (347), Expect = 3.358e-32 Identity = 70/140 (50.00%), Postives = 89/140 (63.57%), Query Frame = 2 Query: 77 PKVQALKTAKAVKSGRTFKKAKKIRTSVTFHRPKTLKKDRNPKYPRISAPPRNKLDHYQILKYPLTTESAMKKIEDNNTLVFXXXXXXXXXXXXXXXXXMYDIQAKKVNTLIRPDGTKKAYVRLTPDSDALDVANKIGII 496 P +A KAV G KKA K+RTS TF PKTLK R PKY + P N+LD Y++++ P+T+E+AMKK+ED N LVF +Y++ KVNTL+RP+GTKKAYVRLT D DALD+AN+IG I Sbjct: 3 PSAKATAAKKAVVKGTNGKKALKVRTSATFRLPKTLKLARAPKYASKAVPHYNRLDSYKVIEQPITSETAMKKVEDGNILVFQVSMKANKYQIKKAVKELYEVDVLKVNTLVRPNGTKKAYVRLTADYDALDIANRIGYI 142
BLAST of FC871916 vs. ExPASy Swiss-Prot
Match: RL25_KLULA (60S ribosomal protein L25 OS=Kluyveromyces lactis GN=RPL25 PE=3 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 3.358e-32 Identity = 69/140 (49.29%), Postives = 90/140 (64.29%), Query Frame = 2 Query: 77 PKVQALKTAKAVKSGRTFKKAKKIRTSVTFHRPKTLKKDRNPKYPRISAPPRNKLDHYQILKYPLTTESAMKKIEDNNTLVFXXXXXXXXXXXXXXXXXMYDIQAKKVNTLIRPDGTKKAYVRLTPDSDALDVANKIGII 496 P +A KAV G KKA K+RTS +F PKTLK R+PKY + P N+LD Y++++ P+T+E+AMKK+ED NTLVF +Y++ VNTL+RP+GTKKAYVRLT D DALD+AN+IG I Sbjct: 3 PSTKATAAKKAVVKGTNGKKALKVRTSASFRLPKTLKLARSPKYATKAVPHYNRLDSYKVIEQPITSETAMKKVEDGNTLVFKVSLKANKYQIKKAVKELYEVDVLSVNTLVRPNGTKKAYVRLTADFDALDIANRIGYI 142
BLAST of FC871916 vs. ExPASy Swiss-Prot
Match: R23A1_CAEEL (60S ribosomal protein L23a 1 OS=Caenorhabditis elegans GN=rpl-25.1 PE=2 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 7.482e-32 Identity = 72/137 (52.55%), Postives = 92/137 (67.15%), Query Frame = 2 Query: 86 QALKTAKAVKSGRTFKKAKKIRTSVTFHRPKTLKKDRNPKYPRISAPPRNKLDHYQILKYPLTTESAMKKIEDNNTLVFXXXXXXXXXXXXXXXXXMYDIQAKKVNTLIRPDGTKKAYVRLTPDSDALDVANKIGII 496 +AL K V G+ +++RTSV F RP TLK R ++PR SAP +K+DH++I+++PLTTESAMKKIE++NTLVF +Y++QA KVNTLI P KKAYVRLT D DALDVANKIG+I Sbjct: 11 KALDAKKKVVKGKRTTHRRQVRTSVHFRRPVTLKTARQARFPRKSAPKTSKMDHFRIIQHPLTTESAMKKIEEHNTLVFIVSNDANKYQIKDAVHKLYNVQALKVNTLITPLQQKKAYVRLTADYDALDVANKIGVI 147
BLAST of FC871916 vs. ExPASy Swiss-Prot
Match: RL25_PICJA (60S ribosomal protein L25 OS=Pichia jadinii GN=RPL25 PE=3 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 1.276e-31 Identity = 70/140 (50.00%), Postives = 87/140 (62.14%), Query Frame = 2 Query: 77 PKVQALKTAKAVKSGRTFKKAKKIRTSVTFHRPKTLKKDRNPKYPRISAPPRNKLDHYQILKYPLTTESAMKKIEDNNTLVFXXXXXXXXXXXXXXXXXMYDIQAKKVNTLIRPDGTKKAYVRLTPDSDALDVANKIGII 496 P +A KAV G KA K+RTS TF PKTLK R PKY R + P +LD+Y+++ P+ +E+AMKK+ED NTLVF +Y++ VNTLIRP+GTKKAYVRLT D DALD+ANKIG I Sbjct: 3 PSTKAASAKKAVVKGSNGSKALKVRTSTTFRLPKTLKLTRAPKYARKAVPHYQRLDNYKVIVAPIASETAMKKVEDGNTLVFQVDIKANKHQIKQAVKDLYEVDVLAVNTLIRPNGTKKAYVRLTADHDALDIANKIGYI 142
BLAST of FC871916 vs. ExPASy Swiss-Prot
Match: RL25B_SCHPO (60S ribosomal protein L25-B OS=Schizosaccharomyces pombe GN=rpl25b PE=2 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 3.713e-31 Identity = 68/131 (51.91%), Postives = 89/131 (67.94%), Query Frame = 2 Query: 104 KAVKSGRTFKKAKKIRTSVTFHRPKTLKKDRNPKYPRISAPPRNKLDHYQILKYPLTTESAMKKIEDNNTLVFXXXXXXXXXXXXXXXXXMYDIQAKKVNTLIRPDGTKKAYVRLTPDSDALDVANKIGII 496 K V+ G K A+K+RTS TF RPKTL+ R PKY R S P ++LD Y+I+ P+ +ESAMKKIED+NTLVF +Y + A K+NTLIRP+GTKKA+V+L+ D+DALDVAN+IG + Sbjct: 11 KTVQKGIHNKVARKVRTSTTFRRPKTLELARKPKYARKSVPHASRLDEYKIIVNPINSESAMKKIEDDNTLVFHVHLKANKFTIKNAVKKLYSVDAVKINTLIRPNGTKKAFVKLSADADALDVANRIGFL 141
BLAST of FC871916 vs. ExPASy Swiss-Prot
Match: RL25A_SCHPO (60S ribosomal protein L25-A OS=Schizosaccharomyces pombe GN=rpl25a PE=1 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 4.105e-30 Identity = 67/131 (51.15%), Postives = 87/131 (66.41%), Query Frame = 2 Query: 104 KAVKSGRTFKKAKKIRTSVTFHRPKTLKKDRNPKYPRISAPPRNKLDHYQILKYPLTTESAMKKIEDNNTLVFXXXXXXXXXXXXXXXXXMYDIQAKKVNTLIRPDGTKKAYVRLTPDSDALDVANKIGII 496 K V+ G K AKK+RTS TF RPKTL+ R PKY R S +LD Y+I+ P+ +ESAMKKIED+NTLVF +Y ++ K+NTLIRP+GTKKA+V+L+ D+DALDVAN+IG + Sbjct: 11 KTVQKGIHNKVAKKVRTSTTFRRPKTLQLSRKPKYARKSVAHAPRLDEYKIIVNPINSESAMKKIEDDNTLVFHVHLKANKFTIKEAVRKLYSVEPVKINTLIRPNGTKKAFVKLSADADALDVANRIGFL 141
BLAST of FC871916 vs. ExPASy Swiss-Prot
Match: R23A2_CAEEL (60S ribosomal protein L23a 2 OS=Caenorhabditis elegans GN=rpl-25.2 PE=2 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 4.105e-30 Identity = 76/152 (50.00%), Postives = 91/152 (59.87%), Query Frame = 2 Query: 41 MAPPKGETKKADPKVQALKTAKAVKSGRTFKKAKKIRTSVTFHRPKTLKKDRNPKYPRISAPPRNKLDHYQILKYPLTTESAMKKIEDNNTLVFXXXXXXXXXXXXXXXXXMYDIQAKKVNTLIRPDGTKKAYVRLTPDSDALDVANKIGII 496 MAP + KA ++ KAV G K +RTSV F RPKTL R P+Y R SAP R+KLD + ++K P TTES+MKKIED+NTLVF +Y+++A KVNTLI P KKAYVRL D DALDVANKIG I Sbjct: 1 MAPSSNKVGKA------IQAKKAVVKGSKTNVRKNVRTSVHFRRPKTLVTARAPRYARKSAPARDKLDSFAVIKAPHTTESSMKKIEDHNTLVFIVDEKANKHHIKRAVHALYNVKAVKVNTLITPLQQKKAYVRLASDYDALDVANKIGFI 146
BLAST of FC871916 vs. ExPASy Swiss-Prot
Match: RL23A_DICDI (60S ribosomal protein L23a OS=Dictyostelium discoideum GN=rpl23a PE=3 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 7.742e-29 Identity = 66/138 (47.83%), Postives = 86/138 (62.32%), Query Frame = 2 Query: 83 VQALKTAKAVKSGRTFKKAKKIRTSVTFHRPKTLKKDRNPKYPRISAPPRNKLDHYQILKYPLTTESAMKKIEDNNTLVFXXXXXXXXXXXXXXXXXMYDIQAKKVNTLIRPDGTKKAYVRLTPDSDALDVANKIGII 496 ++A A AVK G + K +K+RTSV F RP TL + P YPR S K+D ++ILK PLTTESA +KIE +NT+ F MYD++ K+VNTLI P G KKA+V L+P+ +A DVANKIG+I Sbjct: 32 IKAKAAASAVKKGVSNKSTRKVRTSVIFRRPVTLNNPKKPAYPRRSVNKITKMDQFRILKAPLTTESATQKIEGSNTITFMVDMFANKSQVADAVAKMYDVKVKRVNTLITPRGEKKAFVTLSPEFEAADVANKIGLI 169
BLAST of FC871916 vs. ExPASy Swiss-Prot
Match: RL23A_TRYBB (60S ribosomal protein L23a OS=Trypanosoma brucei brucei GN=RPL23A PE=2 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 1.671e-23 Identity = 61/155 (39.35%), Postives = 84/155 (54.19%), Query Frame = 2 Query: 32 RRTMAPPKGETKKADPKVQALKTAKAVKSGRTFKKAKKIRTSVTFHRPKTLKKDRNPKYPRISAPPRNKLDHYQILKYPLTTESAMKKIEDNNTLVFXXXXXXXXXXXXXXXXXMYDIQAKKVNTLIRPDGTKKAYVRLTPDSDALDVANKIGII 496 ++ AP +KK K AK K + K+ K T F RP T ++ K + +NK D ++I++YPLTT+ AMKKIE+NNTL F +Y ++ KVNTLIRPDG KKAY+RL+ DALD ANK+G++ Sbjct: 12 KKNSAPKSAVSKKVAKKGAPAAAAKPTKVVKVTKR--KAYTRPQFRRPHTYRRPATVKPSSNVSAIKNKWDAFRIIRYPLTTDKAMKKIEENNTLTFIVDSRANKTEIKKAIRKLYQVKTVKVNTLIRPDGLKKAYIRLSASYDALDTANKMGLV 164
BLAST of FC871916 vs. ExPASy Swiss-Prot
Match: RK23_SPIOL (50S ribosomal protein L23, chloroplastic OS=Spinacia oleracea GN=RPL23 PE=1 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.514e-16 Identity = 47/108 (43.52%), Postives = 64/108 (59.26%), Query Frame = 2 Query: 170 RPKTLKKDRNPKYPRISAPPRNKLDHYQILKYPLTTESAMKKIEDNNTLVFXXXXXXXXXXXXXXXXXMYDIQAKKVNTLIRPDGTKKAYVRLTPDSDALDVANKIGI 493 +PKT KK + KYPR LD YQIL+ P+ TE+A+K I D N+L+F + ++ +KVNTLIRPDGTKKAY+ L + +A ++A KIGI Sbjct: 92 QPKTSKKAKKLKYPR------RILDVYQILQSPIITEAAIKNIADENSLLFTVDVRADKKMIREAISNFFGVKVRKVNTLIRPDGTKKAYIMLNKEYNASELAKKIGI 193 The following BLAST results are available for this feature:
BLAST of FC871916 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 21
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Sequences
The
following sequences are available for this feature:
EST sequence >FC871916 ID=FC871916; Name=FC871916; organism=Citrus sinensis; type=EST; length=646bpback to top |