CV887373
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV887373 vs. ExPASy Swiss-Prot
Match: PTH_ANASK (Peptidyl-tRNA hydrolase OS=Anaeromyxobacter sp. (strain K) GN=pth PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 3.317e-19 Identity = 47/136 (34.56%), Postives = 72/136 (52.94%), Query Frame = -2 Query: 436 VGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVXXXXXXXXXXXXXXLKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 843 +G V + KPQTYMN SGE+ G ++KL L+ ++V HDD+ L +KSV N G+ E+AR+R+G+GRPP +MDP ++L KF +D +++ VE +L + G + N Sbjct: 51 LGPERVWIMKPQTYMNHSGEAVGAALRFWKLGLDDLVVVHDDLELDPYRVQLKVGGGHGGHNGVKSV-NAHVGSPEYARVRVGVGRPPPRMDPADYVLGKFAKGEDAELDLCVEQAVEATRLAVELGAARAMNQVN 185 HSP 2 Score: 35.039 bits (79), Expect = 3.317e-19 Identity = 17/44 (38.64%), Postives = 23/44 (52.27%), Query Frame = -3 Query: 840 GNPGDKYKGTRPNVGFEMIDAFAESQGISMNTVHCKATFGQGLL 971 GNPG++Y TR NVGF + D A+ G S + A + L Sbjct: 8 GNPGEEYARTRHNVGFVVADRLAQLAGASFSAKKFAAELAEARL 51
BLAST of CV887373 vs. ExPASy Swiss-Prot
Match: PTH_ANAD2 (Peptidyl-tRNA hydrolase OS=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) GN=pth PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 3.317e-19 Identity = 47/136 (34.56%), Postives = 72/136 (52.94%), Query Frame = -2 Query: 436 VGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVXXXXXXXXXXXXXXLKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 843 +G V + KPQTYMN SGE+ G ++KL L+ ++V HDD+ L +KSV N G+ E+AR+R+G+GRPP +MDP ++L KF +D +++ VE +L + G + N Sbjct: 51 LGPERVWIMKPQTYMNHSGEAVGAALRFWKLGLDDLVVVHDDLELDPYRVQLKVGGGHGGHNGVKSV-NAHVGSPEYARVRVGVGRPPPRMDPADYVLGKFAKGEDAELDLCVEQAVEATRLAVELGAARAMNQVN 185 HSP 2 Score: 35.039 bits (79), Expect = 3.317e-19 Identity = 17/44 (38.64%), Postives = 23/44 (52.27%), Query Frame = -3 Query: 840 GNPGDKYKGTRPNVGFEMIDAFAESQGISMNTVHCKATFGQGLL 971 GNPG++Y TR NVGF + D A+ G S + A + L Sbjct: 8 GNPGEEYARTRHNVGFVVADRLAQLAGASFSAKKFAAELAEARL 51
BLAST of CV887373 vs. ExPASy Swiss-Prot
Match: PTH_NITOC (Peptidyl-tRNA hydrolase OS=Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848) GN=pth PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 3.317e-19 Identity = 46/127 (36.22%), Postives = 71/127 (55.91%), Query Frame = -2 Query: 442 LAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVXXXXXXXXXXXXXXLKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARH 822 L KP T+MN SG++ L YY++PL +L+ HDD+ LP GV L+ ++N G R+F RLR+G+G P D +++L + + R+ I+ A+ G+EVL +L+ G E A H Sbjct: 63 LLKPATFMNRSGQAVLALLNYYQIPLEHLLIAHDDLDLPPGVAKLKRAGGHGGHNGLRDIINRL-GRRDFLRLRLGVGHPGSGQDVVSYVLNRPSREDRQAIEAAIGAGLEVLPEVLA-GEMEKAMH 187 HSP 2 Score: 36.1946 bits (82), Expect = 3.317e-19 Identity = 16/29 (55.17%), Postives = 19/29 (65.52%), Query Frame = -3 Query: 885 GNPGDKYKGTRPNVGFEMIDAFAESQGIS 971 GNPG +Y TR N GF +DAFA GI+ Sbjct: 12 GNPGTEYAQTRHNAGFWWLDAFASELGIN 40
BLAST of CV887373 vs. ExPASy Swiss-Prot
Match: PTH_MYCMM (Peptidyl-tRNA hydrolase OS=Mycobacterium marinum (strain ATCC BAA-535 / M) GN=pth PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 3.319e-19 Identity = 46/123 (37.40%), Postives = 69/123 (56.10%), Query Frame = -2 Query: 460 VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVXXXXXXXXXXXXXXLKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGL 828 V+LAKP+ YMN SG PLA +Y +P ++V HD++ L G L+SV G ++F R+RIGIGRPPG+ DP F+L+ F++ R + T ++ + +LL+ GL Sbjct: 60 VVLAKPRCYMNESGRQVAPLAKFYSVPPADLIVIHDELDLDFGRIRLKFGGGEGGHNGLRSVAAAL-GTKDFQRVRIGIGRPPGRKDPATFVLENFSSPERPEVPTICEQAADATELLVEIGL 181 HSP 2 Score: 30.4166 bits (67), Expect = 3.319e-19 Identity = 13/27 (48.15%), Postives = 16/27 (59.26%), Query Frame = -3 Query: 891 GNPGDKYKGTRPNVGFEMIDAFAESQG 971 GNPG+ Y TR N+GF + D A G Sbjct: 11 GNPGENYARTRHNLGFMVADLLAARLG 37
BLAST of CV887373 vs. ExPASy Swiss-Prot
Match: PTH_RHOE4 (Peptidyl-tRNA hydrolase OS=Rhodococcus erythropolis (strain PR4 / NBRC 100887) GN=pth PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 3.319e-19 Identity = 41/123 (33.33%), Postives = 72/123 (58.54%), Query Frame = -2 Query: 460 VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVXXXXXXXXXXXXXXLKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGL 828 V+L KP++YMNLSG + LA ++ + ++V HD++ L G L+S+ ++ +++ R R+GIGRPPG+MDP ++L+ F++ R+ +D +E + ++LLL GL Sbjct: 61 VILGKPRSYMNLSGGAVAGLARFFSVDAANIIVVHDELDLDFGTIRLKLGGGEGGHNGLRSISSSLT-TKDYLRTRVGIGRPPGRMDPADYVLKPFSSTERKELDLVCEEAADAVELLLELGL 182 HSP 2 Score: 31.5722 bits (70), Expect = 3.319e-19 Identity = 17/37 (45.95%), Postives = 21/37 (56.76%), Query Frame = -3 Query: 861 GNPGDKYKGTRPNVGFEMIDAFAESQGISMNTVHCKA 971 GNPG +Y+ TR NVGF + A G N VH K+ Sbjct: 12 GNPGPQYEKTRHNVGFMVAGTLAGRMGGKFN-VHKKS 47
BLAST of CV887373 vs. ExPASy Swiss-Prot
Match: PTH_MYCUA (Peptidyl-tRNA hydrolase OS=Mycobacterium ulcerans (strain Agy99) GN=pth PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 4.317e-19 Identity = 46/123 (37.40%), Postives = 68/123 (55.28%), Query Frame = -2 Query: 460 VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVXXXXXXXXXXXXXXLKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGL 828 V+LAKP+ YMN SG PLA +Y +P ++V HD++ L G L+SV G + F R+RIGIGRPPG+ DP F+L+ F++ R + T ++ + +LL+ GL Sbjct: 60 VVLAKPRCYMNESGRQVAPLAKFYSVPPADLIVIHDELDLDFGRIRLKFGGGEGGHNGLRSVAAAL-GTKNFQRVRIGIGRPPGRKDPATFVLENFSSPERPEVPTICEQAADATELLVEVGL 181 HSP 2 Score: 30.4166 bits (67), Expect = 4.317e-19 Identity = 13/27 (48.15%), Postives = 16/27 (59.26%), Query Frame = -3 Query: 891 GNPGDKYKGTRPNVGFEMIDAFAESQG 971 GNPG+ Y TR N+GF + D A G Sbjct: 11 GNPGENYARTRHNLGFMVADLLAARLG 37
BLAST of CV887373 vs. ExPASy Swiss-Prot
Match: PTH_PELCD (Peptidyl-tRNA hydrolase OS=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) GN=pth PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 4.317e-19 Identity = 42/126 (33.33%), Postives = 70/126 (55.56%), Query Frame = -2 Query: 436 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVXXXXXXXXXXXXXXLKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 813 PQTYMN SG S + + V+V HD++ LP G L+S+++ G R+F R+R+G+GRP GQ+D ++L +F++ + ++D L+ V+ L++LL KG ++ FN Sbjct: 61 PQTYMNRSGVSVVSACKSKGIAVEDVVVIHDEIDLPFGSIRIKVGGGHGGHNGLRSIVD-LLGCRDFLRVRMGVGRPQGQVDVAKYVLGQFSSTEKSQLDNVLENSVKALEVLLQKGAQQAMNEFN 185 HSP 2 Score: 37.7354 bits (86), Expect = 4.317e-19 Identity = 16/42 (38.10%), Postives = 23/42 (54.76%), Query Frame = -3 Query: 846 GNPGDKYKGTRPNVGFEMIDAFAESQGISMNTVHCKATFGQG 971 GNPG +Y TR N+GF + FA+ G+S+ + G G Sbjct: 8 GNPGPEYAATRHNIGFLVAQKFAQQMGVSLKRQAYQGIVGTG 49
BLAST of CV887373 vs. ExPASy Swiss-Prot
Match: PTH_MYCA9 (Peptidyl-tRNA hydrolase OS=Mycobacterium abscessus (strain ATCC 19977 / DSM 44196) GN=pth PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 5.608e-19 Identity = 43/128 (33.59%), Postives = 71/128 (55.47%), Query Frame = -2 Query: 460 VGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVXXXXXXXXXXXXXXLKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGL 843 +G V LAKP+T+MN SG LA ++ +P V+V HD++ L G L+SV + G +++ R+R+G+GRPPG+ DP AF+L+ F +++ ++G + +LL+ GL Sbjct: 59 LGGRAVNLAKPRTFMNTSGPQVAALAKFFSVPPANVIVMHDELDLDFGTVRLKLGGGEGGHNGLRSVSQSL-GTKDYLRVRLGVGRPPGRKDPAAFVLENFAKAETDQVPLLCEQGADAAELLIRLGL 185 HSP 2 Score: 30.4166 bits (67), Expect = 5.608e-19 Identity = 13/27 (48.15%), Postives = 15/27 (55.56%), Query Frame = -3 Query: 891 GNPGDKYKGTRPNVGFEMIDAFAESQG 971 GNPG Y TR N+GF + D A G Sbjct: 15 GNPGPNYAKTRHNLGFMVADLLAAKDG 41
BLAST of CV887373 vs. ExPASy Swiss-Prot
Match: PTH_CLOBK (Peptidyl-tRNA hydrolase OS=Clostridium botulinum (strain Okra / Type B1) GN=pth PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 5.615e-19 Identity = 41/139 (29.50%), Postives = 72/139 (51.80%), Query Frame = -2 Query: 427 VGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVXXXXXXXXXXXXXXLKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQ 843 +G+ ++L KP TYMNLSGES A +YK+ ++V +DDM + G +K+++ + + F R+R+GIG+P + ++L KF+ RE ID L + ++ G+TE+ +N ++ Sbjct: 51 IGNEKIILLKPSTYMNLSGESVIEAANFYKIDKENIIVIYDDMSIDIGKLRVRGKGSAGGHNGIKNIIQHLNSD-IFPRVRVGIGQPDENV--VNYVLGKFSKDQREIIDKVLAMSAKACISIVEDGVTEAMNKYNGVK 186 HSP 2 Score: 43.5134 bits (101), Expect = 5.615e-19 Identity = 18/42 (42.86%), Postives = 27/42 (64.29%), Query Frame = -3 Query: 846 GNPGDKYKGTRPNVGFEMIDAFAESQGISMNTVHCKATFGQG 971 GN G +YK TR N+GF+++D AE I +N K ++G+G Sbjct: 8 GNIGKEYKKTRHNIGFDVVDIIAEKYNIEINRQKFKGSYGEG 49
BLAST of CV887373 vs. ExPASy Swiss-Prot
Match: PTH_CLOK5 (Peptidyl-tRNA hydrolase OS=Clostridium kluyveri (strain ATCC 8527 / DSM 555 / NCIMB 10680) GN=pth PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 5.619e-19 Identity = 44/137 (32.12%), Postives = 73/137 (53.28%), Query Frame = -2 Query: 436 FVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVXXXXXXXXXXXXXXLKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 846 F+G V+L KP TYMNLSGES +YK+ +R+++ +DD+ + G +K+++ N G F R++IGIG P +D +++L KF+ R I+ L+ VE L+ ++ G+ + FN Sbjct: 50 FIGQNKVILLKPGTYMNLSGESVREAVNFYKIENDRMIIIYDDIDIDIGRFRIRHRGSAGGHNGIKNIILNL-GTDVFPRIKIGIGHP--NVDLVSYVLGKFSEDDRINIEKVLKTSVEALECIMDFGIEVAMNKFN 183 HSP 2 Score: 40.0466 bits (92), Expect = 5.619e-19 Identity = 17/44 (38.64%), Postives = 26/44 (59.09%), Query Frame = -3 Query: 840 GNPGDKYKGTRPNVGFEMIDAFAESQGISMNTVHCKATFGQGLL 971 GN G KY TR N+GF+ ID ++ I++N K +G+G + Sbjct: 8 GNIGVKYHRTRHNIGFDFIDLVSKKYNITLNREKFKGNYGEGFI 51 The following BLAST results are available for this feature:
BLAST of CV887373 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CV887373 ID=CV887373; Name=CV887373; organism=Citrus sinensis; type=EST; length=973bpback to top |