CV887372
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV887372 vs. ExPASy Swiss-Prot
Match: PTH_HAEI8 (Peptidyl-tRNA hydrolase OS=Haemophilus influenzae (strain 86-028NP) GN=pth PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 2.109e-19 Identity = 38/128 (29.69%), Postives = 63/128 (49.22%), Query Frame = 2 Query: 473 VGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVXXXXXXXXXXXXXXXKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQERVEVLKLLLSKGL 856 V V L P T+MNLSG++ G LA++Y++ +LV HD++ LP G K ++ N F RLRIGIG P + ++L K + R+ ++ L E + ++++ G+ Sbjct: 55 VNGKEVRLLVPTTFMNLSGKAVGALASFYRIKPEEILVIHDELDLPAGTAKLKQGGGHGGHNGLKDIVAQLGNNNNFYRLRIGIGHPGHRDLVAGYVLNKPSPADRDALEKVLDEATDCVEIIFKDGM 182 HSP 2 Score: 43.5134 bits (101), Expect = 2.109e-19 Identity = 19/36 (52.78%), Postives = 24/36 (66.67%), Query Frame = 3 Query: 330 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMN 437 L VGLGNPG+KY TRHN G +I+ A +S+N Sbjct: 6 LIVGLGNPGEKYADTRHNAGEWLIERLARRFNVSLN 41
BLAST of CV887372 vs. ExPASy Swiss-Prot
Match: PTH_HAEIN (Peptidyl-tRNA hydrolase OS=Haemophilus influenzae GN=pth PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 2.109e-19 Identity = 38/128 (29.69%), Postives = 63/128 (49.22%), Query Frame = 2 Query: 473 VGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVXXXXXXXXXXXXXXXKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQERVEVLKLLLSKGL 856 V V L P T+MNLSG++ G LA++Y++ +LV HD++ LP G K ++ N F RLRIGIG P + ++L K + R+ ++ L E + ++++ G+ Sbjct: 55 VNGKEVRLLVPTTFMNLSGKAVGALASFYRIKPEEILVIHDELDLPPGTAKLKQGGGHGGHNGLKDIVAQLGNNNNFYRLRIGIGHPGHRDLVAGYVLNKPSPADRDALEKVLDEATDCVEMIFRDGM 182 HSP 2 Score: 45.0542 bits (105), Expect = 2.109e-19 Identity = 20/36 (55.56%), Postives = 24/36 (66.67%), Query Frame = 3 Query: 330 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMN 437 L VGLGNPGDKY TRHN G +I+ A +S+N Sbjct: 6 LIVGLGNPGDKYTDTRHNAGEWLIERLARRFNVSLN 41
BLAST of CV887372 vs. ExPASy Swiss-Prot
Match: PTH_GEOSL (Peptidyl-tRNA hydrolase OS=Geobacter sulfurreducens GN=pth PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 2.110e-19 Identity = 42/123 (34.15%), Postives = 62/123 (50.41%), Query Frame = 2 Query: 488 VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVXXXXXXXXXXXXXXXKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQERVEVLKLLLSKGL 856 +LL KPQTYMNLSG S ++KLPL +V HDD+ +P G +S++ G F R+R+GIGRP D ++L F+ + L +++L+ LL+ GL Sbjct: 58 LLLLKPQTYMNLSGRSVAEALRFHKLPLCDTIVIHDDLDIPFGRVKVKEGGGHGGHNGLRSLVQEL-GGAGFVRVRVGIGRPV-HGDVVNYVLTNFSQDEMADLAHLLDGTLDLLESLLTAGL 178 HSP 2 Score: 50.0618 bits (118), Expect = 2.110e-19 Identity = 23/47 (48.94%), Postives = 28/47 (59.57%), Query Frame = 3 Query: 330 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQG 470 L VGLGNPG KY TRHN GF ++D A + G S+ FG+G Sbjct: 5 LIVGLGNPGPKYLWTRHNAGFMVLDRLAHAIGASVTRKSFSGVFGEG 51
BLAST of CV887372 vs. ExPASy Swiss-Prot
Match: PTH_CLOBM (Peptidyl-tRNA hydrolase OS=Clostridium botulinum (strain Loch Maree / Type A3) GN=pth PE=3 SV=1) HSP 1 Score: 62.7734 bits (151), Expect = 2.111e-19 Identity = 36/113 (31.86%), Postives = 59/113 (52.21%), Query Frame = 2 Query: 473 VGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVXXXXXXXXXXXXXXXKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTAL 811 +G+ ++L KP TYMNLSGES A +YK+ ++V +DDM + G K+++ + + F R+R+GIG+P + ++L KF+ RE I+ L Sbjct: 51 IGNEKIILLKPSTYMNLSGESVIEAANFYKIDKENIIVIYDDMSIDIGKLRVRGKGSAGGHNGIKNIIQHLNSD-IFPRVRVGIGQPDENV--VNYVLGKFSKDQREVIEKVL 160 HSP 2 Score: 54.299 bits (129), Expect = 2.111e-19 Identity = 23/48 (47.92%), Postives = 33/48 (68.75%), Query Frame = 3 Query: 327 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQG 470 +L VGLGN G +YK TRHN+GF+++D AE I +N K ++G+G Sbjct: 2 YLVVGLGNIGKEYKKTRHNIGFDVVDIVAEKYNIEINRQKFKGSYGEG 49
BLAST of CV887372 vs. ExPASy Swiss-Prot
Match: PTH_BACHD (Peptidyl-tRNA hydrolase OS=Bacillus halodurans GN=pth PE=3 SV=1) HSP 1 Score: 62.003 bits (149), Expect = 2.113e-19 Identity = 35/121 (28.93%), Postives = 56/121 (46.28%), Query Frame = 2 Query: 488 VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVXXXXXXXXXXXXXXXKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQERVEVLKLLLSK 850 + L KPQT+MN SGES P YY + + +LV +DD+ LP G KS++ + G +F R+R+G+ RP +L ++ ++ I A+ E + K Sbjct: 56 IFLLKPQTFMNRSGESVRPFLEYYNMEVEDLLVIYDDLDLPVGKIRLRQKGSAGGHNGMKSLIAHL-GTSDFKRIRVGVDRPAPGETVVQHVLGRYRPEEKDAISEAIDLSAEAAEAFTKK 175 HSP 2 Score: 55.0694 bits (131), Expect = 2.113e-19 Identity = 24/47 (51.06%), Postives = 30/47 (63.83%), Query Frame = 3 Query: 330 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQG 470 L VGLGNPG KY GTRHNVGF+++DA A I + +G+G Sbjct: 3 LIVGLGNPGAKYDGTRHNVGFDVVDAVARRLNIEIKQSKANGLYGEG 49
BLAST of CV887372 vs. ExPASy Swiss-Prot
Match: PTH_HAES2 (Peptidyl-tRNA hydrolase OS=Haemophilus somnus (strain 2336) GN=pth PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.743e-19 Identity = 37/118 (31.36%), Postives = 64/118 (54.24%), Query Frame = 2 Query: 503 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVXXXXXXXXXXXXXXXKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQERVEVLKLLLSKGL 856 P T+MNLSG++ LA +Y++P ++LV HD++ LP G+ K ++ N+ F RLRIGIG P + +++L K + + ID L E + +++L+ +G+ Sbjct: 65 PTTFMNLSGKAVSALANFYRIPPEQILVLHDELDLPPGIAKLKQGGGHGGHNGLKDIIAQLANNKNFYRLRIGIGHPGDKNLVASYVLNKPSPTDWQLIDRTLDEATDCIEILMKEGI 182 HSP 2 Score: 40.817 bits (94), Expect = 2.743e-19 Identity = 18/28 (64.29%), Postives = 20/28 (71.43%), Query Frame = 3 Query: 330 LFVGLGNPGDKYKGTRHNVGFEMIDAFA 413 L VGLGNPGDKY TRHN G +I+ A Sbjct: 6 LIVGLGNPGDKYADTRHNAGEWLIERLA 33
BLAST of CV887372 vs. ExPASy Swiss-Prot
Match: PTH_CLOPS (Peptidyl-tRNA hydrolase OS=Clostridium perfringens (strain SM101 / Type A) GN=pth PE=3 SV=1) HSP 1 Score: 63.929 bits (154), Expect = 2.746e-19 Identity = 37/114 (32.46%), Postives = 60/114 (52.63%), Query Frame = 2 Query: 470 FVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVXXXXXXXXXXXXXXXKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTAL 811 F+ + V+L KP TYMNLSGES +YKL + ++V +DD+ L G KS++ N G++ F R+++G+G+P + +L KF+ RE I+ + Sbjct: 50 FIENKKVILLKPLTYMNLSGESIREFVNFYKLEDDEIIVVYDDISLDIGRLRIREKGSAGGHNGIKSIIQNLGGDK-FPRVKVGVGQPKDNL--VNHVLGKFSKEDREHIEKVI 160 HSP 2 Score: 52.7582 bits (125), Expect = 2.746e-19 Identity = 23/49 (46.94%), Postives = 31/49 (63.27%), Query Frame = 3 Query: 330 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGLL 476 L VGLGNPG +Y+ TRHN+GF++ID A I +N K G+G + Sbjct: 3 LIVGLGNPGKQYEKTRHNIGFDVIDYMANKYNIDVNREKFKGICGEGFI 51
BLAST of CV887372 vs. ExPASy Swiss-Prot
Match: PTH_HAES1 (Peptidyl-tRNA hydrolase OS=Haemophilus somnus (strain 129Pt) GN=pth PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.567e-19 Identity = 36/118 (30.51%), Postives = 65/118 (55.08%), Query Frame = 2 Query: 503 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVXXXXXXXXXXXXXXXKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQERVEVLKLLLSKGL 856 P T+MNLSG++ LA +Y++P ++LV HD++ G+ K ++ N+ F RLRIGIG P + +++L K + R+ ID +L+E + +++L+ +G+ Sbjct: 65 PTTFMNLSGKAVSALANFYRIPPEQILVLHDELDFSPGIAKIKQGGGHGGHNGLKDIIAQLANNKNFYRLRIGIGHPGDKNLVASYVLNKPSPTDRQLIDRSLEEATDCIEILMKEGI 182 HSP 2 Score: 40.817 bits (94), Expect = 3.567e-19 Identity = 18/28 (64.29%), Postives = 20/28 (71.43%), Query Frame = 3 Query: 330 LFVGLGNPGDKYKGTRHNVGFEMIDAFA 413 L VGLGNPGDKY TRHN G +I+ A Sbjct: 6 LIVGLGNPGDKYADTRHNAGEWLIERLA 33
BLAST of CV887372 vs. ExPASy Swiss-Prot
Match: PTH_HAEIG (Peptidyl-tRNA hydrolase OS=Haemophilus influenzae (strain PittGG) GN=pth PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 3.567e-19 Identity = 38/128 (29.69%), Postives = 62/128 (48.44%), Query Frame = 2 Query: 473 VGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVXXXXXXXXXXXXXXXKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQERVEVLKLLLSKGL 856 V V L P T+MNLSG++ G LA++Y++ +LV HD++ LP G K ++ N F RLRIGIG P + ++L K + R ++ L E + ++++ G+ Sbjct: 55 VNGKEVRLLVPTTFMNLSGKAVGALASFYRIKPEEILVIHDELDLPAGTAKLKQGGGHGGHNGLKDIVAQLGNNNNFYRLRIGIGHPGHRDLVAGYVLNKPSPADRNALEKVLDEATDCVEMIFKDGM 182 HSP 2 Score: 43.5134 bits (101), Expect = 3.567e-19 Identity = 19/36 (52.78%), Postives = 24/36 (66.67%), Query Frame = 3 Query: 330 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMN 437 L VGLGNPG+KY TRHN G +I+ A +S+N Sbjct: 6 LIVGLGNPGEKYADTRHNAGEWLIERLARRFNVSLN 41
BLAST of CV887372 vs. ExPASy Swiss-Prot
Match: PTH_PELPD (Peptidyl-tRNA hydrolase OS=Pelobacter propionicus (strain DSM 2379) GN=pth PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.569e-19 Identity = 45/122 (36.89%), Postives = 64/122 (52.46%), Query Frame = 2 Query: 491 LLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVXXXXXXXXXXXXXXXKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQERVEVLKLLLSKGL 856 +L KPQT+MNLSG S +YKLPL++ +V HDD+ LP G +S+M G +F RLR+GIGRP D ++L E + L +E+L++LL +GL Sbjct: 59 ILLKPQTFMNLSGRSVMQALQFYKLPLSQAIVVHDDLDLPFGTVRLKQGGGHGGHNGLRSIMEQL-GKGDFIRLRVGIGRPL-HGDTVNYVLGSMPPEQMELLPRILDGGLEMLEMLLDQGL 178 HSP 2 Score: 40.817 bits (94), Expect = 3.569e-19 Identity = 16/35 (45.71%), Postives = 22/35 (62.86%), Query Frame = 3 Query: 330 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISM 434 + GLGNPG Y+ TRHN GF +D A + +S+ Sbjct: 5 IIAGLGNPGSHYQWTRHNAGFLFLDRLAHLENVSI 39 The following BLAST results are available for this feature:
BLAST of CV887372 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CV887372 ID=CV887372; Name=CV887372; organism=Citrus sinensis; type=EST; length=857bpback to top |