CV887371

Overview
NameCV887371
Unique NameCV887371
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length847
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV887371 vs. ExPASy Swiss-Prot
Match: Y2239_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At2g23950 OS=Arabidopsis thaliana GN=At2g23950 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.103e-12
Identity = 42/130 (32.31%), Postives = 64/130 (49.23%), Query Frame = -2
Query:  379 NFKGEIPKEIANLPELRYLYLQENRLTGRIPPELGILPNFRHLDVGNNHLVGTIRELIRFEGSFPVXXXXXXXXXXLTGGVPAQLANLTNLEILYLSHNKMSGTIPLALAHIPKLTYLYLDHNQFSGRIP 768
            +  G +   I NL  LR + LQ N ++G+IPPE+  LP  + LD+ NN          RF G                  +P  +  L+NL+ L L++N +SG  P +L+ IP L++L L +N   G +P
Sbjct:   85 SLSGTLSGSIGNLTNLRQVSLQNNNISGKIPPEICSLPKLQTLDLSNN----------RFSGE-----------------IPGSVNQLSNLQYLRLNNNSLSGPFPASLSQIPHLSFLDLSYNNLRGPVP 187          
BLAST of CV887371 vs. ExPASy Swiss-Prot
Match: Y3288_ARATH (Probable inactive receptor kinase At3g02880 OS=Arabidopsis thaliana GN=At3g02880 PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.587e-12
Identity = 48/152 (31.58%), Postives = 68/152 (44.74%), Query Frame = -2
Query:  358 IGELKRLTHLSLSFNNFKGEIPKEIANLPELRYLYLQENRLTGRIPPELGILPNFRHLDVGNNHLVGTIRELIRFEGSFPVXXXXXXXXXXLTGGVPAQLANLTNLEILYLSHNKMSGTIPLALAHIPKLTYLYLDHNQFSGRIPDAFYKHP 813
            IG L +L  LSL FN+  G IP + +NL  LRYLYLQ N  +G IP  L  LP+   +++G N                             +G +P  + + T L  LYL  N++SG IP     + +     +  NQ +G IP +    P
Sbjct:   86 IGNLTQLKTLSLRFNSLSGPIPSDFSNLVLLRYLYLQGNAFSGEIPSLLFTLPSIIRINLGENKF---------------------------SGRIPDNVNSATRLVTLYLERNQLSGPIPEITLPLQQFN---VSSNQLNGSIPSSLSSWP 207          
BLAST of CV887371 vs. ExPASy Swiss-Prot
Match: PGIP1_ARATH (Polygalacturonase inhibitor 1 OS=Arabidopsis thaliana GN=PGIP1 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.587e-12
Identity = 60/191 (31.41%), Postives = 83/191 (43.46%), Query Frame = -2
Query:  271 NKLQDVIPAEIGELKRLTHLSLSFNNFKGEIPKEIANLPELRYLYLQENRLTGRIPPELGILPNFRHLDVGNNHLVGTIRELIRFEGSFPVXXXXXXXXXXLTGGVPAQLANLTNLEILYLSHNKMSGTIPLALAHIPKLTYLYLDHNQFSGRIPDAFYKHPFLKEMYIEGNAFRPGVNPIGIHKVLELTD 843
            + L   I   I +LK L  L LS+ N  G IP  I+ L  L +L L  N L+G IP  L  LP    L++  N L G+I E     GSFP             G VP           L LSHN++SG IP +L +I     + L  N+  G     F  +     + +  N F+  ++ + I K L + D
Sbjct:  105 SNLTGTIQPTIAKLKNLRMLRLSWTNLTGPIPDFISQLKNLEFLELSFNDLSGSIPSSLSTLPKILALELSRNKLTGSIPESF---GSFP-------------GTVPD----------LRLSHNQLSGPIPKSLGNI-DFNRIDLSRNKLQGDASMLFGSNKTTWSIDLSRNMFQFDISKVDIPKTLGILD 268          

HSP 2 Score: 71.633 bits (174), Expect = 6.118e-12
Identity = 47/148 (31.76%), Postives = 72/148 (48.65%), Query Frame = -2
Query:  358 RLTHLSLSFNNFKGEIPKEIANLPELRYLYLQE-NRLTGRIPPELGILPNFRHLDVGNNHLVGTIRELIRFEGSFPVXXXXXXXXXXLTGGVPAQLANLTNLEILYLSHNKMSGTIPLALAHIPKLTYLYLDHNQFSGRIPDAFYKHP 798
            R+T L++      G+IP E+ +LP L  L  ++ + LTG I P +  L N R L +   +L                           TG +P  ++ L NLE L LS N +SG+IP +L+ +PK+  L L  N+ +G IP++F   P
Sbjct:   71 RVTALTIFSGQISGQIPAEVGDLPYLETLVFRKLSNLTGTIQPTIAKLKNLRMLRLSWTNL---------------------------TGPIPDFISQLKNLEFLELSFNDLSGSIPSSLSTLPKILALELSRNKLTGSIPESFGSFP 191          
BLAST of CV887371 vs. ExPASy Swiss-Prot
Match: Y2278_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At2g02780 OS=Arabidopsis thaliana GN=At2g02780 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 4.684e-12
Identity = 48/141 (34.04%), Postives = 71/141 (50.35%), Query Frame = -2
Query:  373 LTHLSLSFNNFKGEIPKEIANLPELRYLYLQENRLTGRIPPELGILPNFRHLDVGNNHLVGTIRELIRFEGSFPVXXXXXXXXXXLTGGVPAQLANLTNLEILYLSHNKMSGTIPLALAHIPKLTYLYLDHNQFSGRIPDA 795
            L  L+LS N   G+IP+EI +L  L+ L L++N   G +  +L  L N + LD+G N L   +  L     +  +              +P Q+  L NL+ L LS N+ +G+IP  L  IP L  L LD N  SG +P++
Sbjct:  133 LESLNLSSNFISGKIPEEIVSLKNLKSLVLRDNMFWGFVSDDLRGLSNLQELDLGGNKLGPEVPSLPSKLTTVSLKNNSFRSK------IPEQIKKLNNLQSLDLSSNEFTGSIPEFLFSIPSLQILSLDQNLLSGSLPNS 267          
BLAST of CV887371 vs. ExPASy Swiss-Prot
Match: Y5344_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53440 OS=Arabidopsis thaliana GN=At1g53440 PE=1 SV=2)

HSP 1 Score: 71.2478 bits (173), Expect = 7.990e-12
Identity = 53/198 (26.77%), Postives = 83/198 (41.92%), Query Frame = -2
Query:  325 NKLQDVIPAEIGELKRLTHLSLSFNNFKGEIPKEIANLPELRYLYLQENRLTGRIPPELGILPNFRHLDVGNNHLVGTIRELIRFEGSFPVXXXXXXXXXXLTGGVPAQLANL------------------------TNLEILYLSHNKMSGTIPLAL-AHIPKLTYLYLDHNQFSGRIPDAFYKHPFLKEMYIEGNA 843
            N+L    P ++G++  LT + +  N F G++P  + NL  L+ L +  N +TGRIP  L  L N  +  +  N L G I + I   G++            + G +PA ++NL                        TN+E L L +  +   IP  +   +  L  L L  N  +G IPD F        MY+  N+
Sbjct:  145 NRLSGPFPPQLGQITTLTDVIMESNLFTGQLPPNLGNLRSLKRLLISSNNITGRIPESLSNLKNLTNFRIDGNSLSGKIPDFI---GNWTRLVRLDLQGTSMEGPIPASISNLKNLTELRITDLRGPTSPFPDLQNMTNMERLVLRNCLIREPIPEYIGTSMTMLKLLDLSSNMLNGTIPDTFRSLNAFNFMYLNNNS 339          
BLAST of CV887371 vs. ExPASy Swiss-Prot
Match: PGIP_PYRCO (Polygalacturonase inhibitor OS=Pyrus communis GN=PGIP PE=1 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 7.990e-12
Identity = 57/173 (32.95%), Postives = 76/173 (43.93%), Query Frame = -2
Query:  325 IPAEIGELKRLTHLSLSFN-NFKGEIPKEIANLPELRYLYLQENRLTGRIPPELGILPNFRHLDVGNNHLVGTIRELIRFEGSFPVXXXXXXXXXXLTGGVPAQLANLTNLEILYLSHNKMSGTIPLALAH-IPKLTYLYLDHNQFSGRIPDAFYKHPF----LKEMYIEGNA 825
            IPA +G+L  L  L      N  G I   IA L  L+ L L    L+G +P  L  L N   LD+  N+L                           TG +P+ L+ L NL  L L  NK++G IP++    I  +  LYL HNQ SG IP +F +  F    L    +EG+A
Sbjct:   86 IPALVGDLPYLETLEFHKQPNLTGPIQPAIAKLKGLKSLRLSWTNLSGSVPDFLSQLKNLTFLDLSFNNL---------------------------TGAIPSSLSELPNLGALRLDRNKLTGHIPISFGQFIGNVPDLYLSHNQLSGNIPTSFAQMDFTSIDLSRNKLEGDA 231          
BLAST of CV887371 vs. ExPASy Swiss-Prot
Match: TMM_ARATH (Protein TOO MANY MOUTHS OS=Arabidopsis thaliana GN=TMM PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.044e-11
Identity = 54/155 (34.84%), Postives = 72/155 (46.45%), Query Frame = -2
Query:  364 IPAEIGELKRLTHLSLSFNNFKGEIPKEIANLPELRYLYLQENRLTGRIPPELGILPNFRHLDVGNNHLVGTIRELIRFEGSFPVXXXXXXXXXXLTGGVPAQLANLTNLEILYLSHNKMSGTIPLALAHIPKLTYLYLDHN-QFSGRIPDAFYK 825
            IP E+G L  L  L L  N+  G IP        LR L L  NRLTG IP    +LP    LD+  N L G +   +   GS             +TG +P  +  L  L +L LS+N++SG  P +L  +  L  L L  N +FS  IP+  +K
Sbjct:  175 IPDELGNLTNLKVLDLHKNHLNGSIPLSFNRFSGLRSLDLSGNRLTGSIPG--FVLPALSVLDLNQNLLTGPVPPTLTSCGSL---IKIDLSRNRVTGPIPESINRLNQLVLLDLSYNRLSGPFPSSLQGLNSLQALMLKGNTKFSTTIPENAFK 324          
BLAST of CV887371 vs. ExPASy Swiss-Prot
Match: PGIP2_ARATH (Polygalacturonase inhibitor 2 OS=Arabidopsis thaliana GN=PGIP2 PE=2 SV=2)

HSP 1 Score: 70.8626 bits (172), Expect = 1.044e-11
Identity = 49/152 (32.24%), Postives = 72/152 (47.37%), Query Frame = -2
Query:  349 RLTHLSLSFNNFKGEIPKEIANLPELRYLYLQE-NRLTGRIPPELGILPNFRHLDVGNNHLVGTIRELIRFEGSFPVXXXXXXXXXXLTGGVPAQLANLTNLEILYLSHNKMSGTIPLALAHIP-KLTYLYLDHNQFSGRIPDAFYKHPFLK 798
            R+T L +      G+IP E+ +LP L  L  ++   LTG I P +  L N   L +   +L G + E   F                L+G +P+ L++L  LE L LS NK++G IP +      K+  L+L HNQ SG IP +     F +
Sbjct:   71 RVTSLIIQDGEISGQIPPEVGDLPYLTSLIFRKLTNLTGHIQPTIAKLKNLTFLRLSWTNLTGPVPE---FLSQLKNLEYIDLSFNDLSGSIPSSLSSLRKLEYLELSRNKLTGPIPESFGTFSGKVPSLFLSHNQLSGTIPKSLGNPDFYR 219          

HSP 2 Score: 69.3218 bits (168), Expect = 3.036e-11
Identity = 56/185 (30.27%), Postives = 83/185 (44.86%), Query Frame = -2
Query:  271 IPAEIGELKRLTHLSLSFNNFKGEIPKEIANLPELRYLYLQENRLTGRIPPELGILPNFRHLDVGNNHLVGTIRELIRFEGSFPVXXXXXXXXXXLTGGVPAQLANLTNLEILYLSHNKMSGTIPLALAHIPKLTYLYLDHNQFSGRIPDAFYKHPFLKEMYIEGNAFRPGVNPIGIHKVLELTD 825
            I   I +LK LT L LS+ N  G +P+ ++ L  L Y+ L  N L+G IP  L  L    +L++  N L G I E     G+F             +G VP+          L+LSHN++SGTIP +L + P    + L  N+  G     F        + I  N F+  ++ + + K L   D
Sbjct:  111 IQPTIAKLKNLTFLRLSWTNLTGPVPEFLSQLKNLEYIDLSFNDLSGSIPSSLSSLRKLEYLELSRNKLTGPIPESF---GTF-------------SGKVPS----------LFLSHNQLSGTIPKSLGN-PDFYRIDLSRNKLQGDASILFGAKKTTWIVDISRNMFQFDLSKVKLAKTLNNLD 268          
BLAST of CV887371 vs. ExPASy Swiss-Prot
Match: Y4374_ARATH (Probable inactive receptor kinase At4g23740 OS=Arabidopsis thaliana GN=At4g23740 PE=1 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.363e-11
Identity = 48/157 (30.57%), Postives = 73/157 (46.50%), Query Frame = -2
Query:  355 PAEIGELKRLTHLSLSFNNFKGEIPKEIANLPELRYLYLQENRLTGRIPPELGILPNFRHLDVGNNHLVGTIRELIRFEGSFPVXXXXXXXXXXLTGGVPAQLANLTNLEILYLSHNKMSGTIPLALAHIPKLTYLYLDHN-QFSGRIPDAFYKHPF 822
            P  I  L  L  LSL  N   GE PK+   L +L +LYLQ+N L+G +P +  +  N   +++ NN   GTI                           P+ L+ L  ++ L L++N +SG IP  L+ +  L ++ L +N   +G IPD   + PF
Sbjct:   86 PNTISRLSALRVLSLRSNLISGEFPKDFVELKDLAFLYLQDNNLSGPLPLDFSVWKNLTSVNLSNNGFNGTI---------------------------PSSLSRLKRIQSLNLANNTLSGDIP-DLSVLSSLQHIDLSNNYDLAGPIPDWLRRFPF 214          
BLAST of CV887371 vs. ExPASy Swiss-Prot
Match: Y1634_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g63430 OS=Arabidopsis thaliana GN=At1g63430 PE=1 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.363e-11
Identity = 48/143 (33.57%), Postives = 67/143 (46.85%), Query Frame = -2
Query:  418 NKLQDVIPAEIGELKRLTHLSLSFNNFKGEIPKEIANLPELRYLYLQENRLTGRIPPELGILPNFRHLDVGNNHLVGTIRELIRFEGSFPVXXXXXXXXXXLTGGVPAQLANL-TNLEILYLSHNKMSGTIPLALAHIPKLTY 843
            N L   IP EIG LK L  L L  N+  G IP EI +L  +  + LQ N LTG++P ELG L   R L +  N          R +GS  V           +    A +A L  +L++   S+N   G IP  L ++P+ ++
Sbjct:  103 NILIGTIPKEIGNLKNLKILDLGNNHLMGPIPAEIGSLSGIMIINLQSNGLTGKLPAELGNLKYLRELHIDRN----------RLQGSLLVAGASGYQSKVYSSNSSANIAGLCKSLKVADFSYNFFVGNIPKCLENLPRTSF 235          

HSP 2 Score: 67.781 bits (164), Expect = 8.834e-11
Identity = 41/114 (35.96%), Postives = 63/114 (55.26%), Query Frame = -2
Query:  445 LSLSFNNFKGEIPKEIANLPELRYLYLQENRLTGRIPPELGILPNFRHLDVGNNHLVGTIRELIRFEGSFPVXXXXXXXXXXLTGGVPAQLANLTNLEILYLSHNKMSGTIPLA 786
            +++S ++ KG +  E+  +  L+ L L  N L G IP E+G L N + LD+GNNHL+G I   I   GS             LTG +PA+L NL  L  L++  N++ G++ +A
Sbjct:   74 INISASSIKGFLAPELGQITYLQELILHGNILIGTIPKEIGNLKNLKILDLGNNHLMGPIPAEI---GSLSGIMIINLQSNGLTGKLPAELGNLKYLRELHIDRNRLQGSLLVA 184          
The following BLAST results are available for this feature:
BLAST of CV887371 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 76
Match NameE-valueIdentityDescription
Y2239_ARATH2.103e-1232.31Probable LRR receptor-like serine/threonine-protei... [more]
Y3288_ARATH3.587e-1231.58Probable inactive receptor kinase At3g02880 OS=Ara... [more]
PGIP1_ARATH3.587e-1231.41Polygalacturonase inhibitor 1 OS=Arabidopsis thali... [more]
Y2278_ARATH4.684e-1234.04Probable LRR receptor-like serine/threonine-protei... [more]
Y5344_ARATH7.990e-1226.77Probable LRR receptor-like serine/threonine-protei... [more]
PGIP_PYRCO7.990e-1232.95Polygalacturonase inhibitor OS=Pyrus communis GN=P... [more]
TMM_ARATH1.044e-1134.84Protein TOO MANY MOUTHS OS=Arabidopsis thaliana GN... [more]
PGIP2_ARATH1.044e-1132.24Polygalacturonase inhibitor 2 OS=Arabidopsis thali... [more]
Y4374_ARATH1.363e-1130.57Probable inactive receptor kinase At4g23740 OS=Ara... [more]
Y1634_ARATH1.363e-1133.57Probable LRR receptor-like serine/threonine-protei... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_030H05_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_030_T7_H05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV887371 ID=CV887371; Name=CV887371; organism=Citrus sinensis; type=EST; length=847bp
TTTTTTTTACTTTAACATACGGTATTGTATAATGCAAGACAATTACAAGA
CAGCATCTCTGTTACAGAACAAATCATTTAAAAAGCAAATGACATTCATG
ATAATGGCAAAAATATGTGCTAAATCAAAACGATCTACTTACCTAGACAA
TTGAATTATAAACATCCCCAGCCTTGACTTCCTTTGAAGATACAAGGTGA
TCAAATTGATATTTTTGGCATATAATTAAGAGAAACTATGCATCATTTTC
GACTAAACTAGAAATTCCGTGTCAGTAAGCTCAAGCACCTTGTGGATTCC
GATGGGATTTACACCCGGCCGGAATGCATTACCTTCAATGTACATTTCTT
TCAAGAAAGGATGCTTATAGAATGCATCTGGGATCCTCCCTGAAAATTGA
TTATGATCCAAGTACAGGTAAGTCAATTTAGGAATATGGGCAAGTGCTAA
TGGTATTGTTCCAGACATTTTGTTGTGGGATAAATACAATATTTCCAAAT
TAGTCAAATTTGCAAGCTGGGCAGGAACTCCTCCAGTCAAATAGTTGTTA
TTCAAGTACAGGTTGCGCAGAACTGGAAAGCTTCCTTCAAATCGGATGAG
TTCCCTAATGGTACCAACCAAGTGATTGTTACCAACATCCAAATGCCGGA
AGTTAGGTAAAATCCCTAATTCGGGTGGAATACGCCCAGTTAAACGGTTT
TCTTGAAGGTAGAGGTAGCGAAGCTCGGGTAGATTAGCAATCTCCTTAGG
AATTTCACCCTTAAAATTGTTGAAGCTCAGAGACAAATGCGTCAGTCTCT
TTAATTCTCCAATCTCTGCAGGAATGACATCTTGTAGTTTATTCCAC
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