CV887371
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV887371 vs. ExPASy Swiss-Prot
Match: LRC40_DANRE (Leucine-rich repeat-containing protein 40 OS=Danio rerio GN=lrrc40 PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.363e-11 Identity = 49/143 (34.27%), Postives = 72/143 (50.35%), Query Frame = -2 Query: 397 IPAEIGELKRLTHLSLSFNNFKGEIPKEIANLPELRYLYLQENRLTGRIPPELGILPNFRHLDVGNNHLVGTIRELIRFEGSFPVXXXXXXXXXXLTGGVPAQLANLTNLEILYLSHNKMSGTIPLALAHIPKLTYLYLDHNQ 825 +P IG+L++L L LS N E+P + L LR L+LQ+N L +IP +LG L N LD+ NNHL+ L + + +P ++ + NL +L S N+M +IP LA + L LYL HN+ Sbjct: 118 LPDSIGDLEQLQKLILSHNKLT-ELPSGVWRLTNLRCLHLQQN-LIEQIPRDLGQLVNLDELDLSNNHLIDIPESLANLQNLVKLDLSCNKLK-----SLPPAISQMKNLRMLDCSRNQME-SIPPVLAQMESLEQLYLRHNK 252
BLAST of CV887371 vs. ExPASy Swiss-Prot
Match: Y4372_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At4g37250 OS=Arabidopsis thaliana GN=At4g37250 PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 3.036e-11 Identity = 53/175 (30.29%), Postives = 74/175 (42.29%), Query Frame = -2 Query: 379 NKLQDVIPAEIGELKRLTHLSLSFNNFKGEIPKEIANLPELRYLYLQENRLTGRIPPELGILPNFRHLDVGNNHLVGTIRELIRFEGSFPVXXXXXXXXXXLTGGVPAQLANLTNLEILYLSHNKMSGTIP--------------LALAHIP------KLTYLYLDHNQFSGRIP 843 ++L IP+++G L L L LS N+F G +P N ELR+L L N ++G IP +G L N L++ +N L G + P LA+L NL ++ L +N SG IP L +P L YL + NQ SG IP Sbjct: 76 SQLLGSIPSDLGSLLTLQSLDLSNNSFNGPLPVSFFNARELRFLDLSSNMISGEIPSAIGDLHNLLTLNLSDNALAGKL---------------------------PTNLASLRNLTVVSLENNYFSGEIPGGWRVVEFLDLSSNLINGSLPPDFGGYSLQYLNVSFNQISGEIP 223
BLAST of CV887371 vs. ExPASy Swiss-Prot
Match: SERK1_ARATH (Somatic embryogenesis receptor kinase 1 OS=Arabidopsis thaliana GN=SERK1 PE=1 SV=2) HSP 1 Score: 69.3218 bits (168), Expect = 3.036e-11 Identity = 43/122 (35.25%), Postives = 57/122 (46.72%), Query Frame = -2 Query: 451 EIGELKRLTHLSLSFNNFKGEIPKEIANLPELRYLYLQENRLTGRIPPELGILPNFRHLDVGNNHLVGTIRELIRFEGSFPVXXXXXXXXXXLTGGVPAQLANLTNLEILYLSHNKMSGTIP 816 E+G LK L +L L NN G IP + NL L L L N +G IP LG L R L + NN L TG +P L N+T L++L LS+N++SG++P Sbjct: 88 ELGVLKNLQYLELYSNNITGPIPSNLGNLTNLVSLDLYLNSFSGPIPESLGKLSKLRFLRLNNNSL---------------------------TGSIPMSLTNITTLQVLDLSNNRLSGSVP 182
BLAST of CV887371 vs. ExPASy Swiss-Prot
Match: PGIP_VITVI (Polygalacturonase inhibitor OS=Vitis vinifera GN=pgip PE=1 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 5.179e-11 Identity = 55/180 (30.56%), Postives = 78/180 (43.33%), Query Frame = -2 Query: 376 NKLQDVIPAEIGELKRLTHLSLSFNNFKGEIPKEIANLPELRYLYLQENRLTGRIPPELGILPNFRHLDVGNNHLVGTIRELI-RFEGSFPVXXXXXXXXXXLTGGVPAQLANLTNLEILYLSHNKMSGTI----------------------PLALAHIPK-LTYLYLDHNQFSGRIPD 843 + L IP I +LK L + LS+ N G +P + L L YL L N L+G IP L +LPN L + NHL G I + +F GS P L+G +P + ++ LS NK+ G + L+ PK LT L L HN+ +G +P+ Sbjct: 108 SNLTGQIPPAIAKLKHLKMVRLSWTNLSGPVPAFFSELKNLTYLDLSFNNLSGPIPGSLSLLPNLGALHLDRNHLTGPIPDSFGKFAGSTP---GLHLSHNQLSGKIPYSFRGF-DPNVMDLSRNKLEGDLSIFFNANKSTQIVDFSRNLFQFDLSRVEFPKSLTSLDLSHNKIAGSLPE 283
BLAST of CV887371 vs. ExPASy Swiss-Prot
Match: SERK5_ARATH (Somatic embryogenesis receptor kinase 5 OS=Arabidopsis thaliana GN=SERK5 PE=1 SV=2) HSP 1 Score: 68.1662 bits (165), Expect = 6.764e-11 Identity = 46/139 (33.09%), Postives = 65/139 (46.76%), Query Frame = -2 Query: 379 LTHLSLSFNNFKGEIPKEIANLPELRYLYLQENRLTGRIPPELGILPNFRHLDVGNNHLVGTIRELIRFEGSFPVXXXXXXXXXXLTGGVPAQLANLTNLEILYLSHNKMSGTIPLALAHIPKLTYLYLDHNQFSGRIP 795 +T L L N GE+ ++A LP L+YL L N +TG IP ELG L LD+ N++ +G +P+ L L L L L +N +SG IP +L +P L L + +N+ SG IP Sbjct: 72 VTRLDLGSANLSGELVPQLAQLPNLQYLELFNNNITGEIPEELGDLMELVSLDLFANNI---------------------------SGPIPSSLGKLGKLRFLRLYNNSLSGEIPRSLTALP-LDVLDISNNRLSGDIP 182
BLAST of CV887371 vs. ExPASy Swiss-Prot
Match: Y5332_ARATH (Probable inactive receptor kinase At5g53320 OS=Arabidopsis thaliana GN=At5g53320 PE=1 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 8.834e-11 Identity = 50/158 (31.65%), Postives = 67/158 (42.41%), Query Frame = -2 Query: 358 DVIPAEIGELKRLTHLSLSFNNFKGEIPKEIANLPELRYLYLQENRLTGRIPPELGILPNFRHLDVGNNHLVGTIRELIRFEGSFPVXXXXXXXXXXLTGGVPAQLANLTNLEILYLSHNKMSGTIPLALAHIPKLTYLYLDHNQFSGRIPDAFYKHP 831 D+ + I L L L LS NN G P + L L L L N +G +P +L + LD+ NN RF GS +P+ + LT L L L++NK SG IP HIP L L L HN +G +P + + P Sbjct: 80 DIELSIIARLSNLRFLILSSNNISGTFPTTLQALKNLTELKLDFNEFSGPLPSDLSSWERLQVLDLSNN----------RFNGS-----------------IPSSIGKLTLLHSLNLAYNKFSGEIPDL--HIPGLKLLNLAHNNLTGTVPQSLQRFP 208 The following BLAST results are available for this feature:
BLAST of CV887371 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 76
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Sequences
The
following sequences are available for this feature:
EST sequence >CV887371 ID=CV887371; Name=CV887371; organism=Citrus sinensis; type=EST; length=847bpback to top |