CV887370
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV887370 vs. ExPASy Swiss-Prot
Match: RKF1_ARATH (Probable LRR receptor-like serine/threonine-protein kinase RFK1 OS=Arabidopsis thaliana GN=RKF1 PE=1 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 1.115e-13 Identity = 55/180 (30.56%), Postives = 87/180 (48.33%), Query Frame = 1 Query: 301 LTRLDLHNNKLTGPIPPQIGRLKRLRILNLRWNKLQDVIPAEIGELKRLTHLSLSFNNFKGEIPKEIANLPELRYLYLQENRLTGRIPPELGILPNFRHLDVGNNHLVGTIRELIRFEGSFPVXXXXXXXXXXXTGGVPAQLANLTNLEILYLSHNKMSGTIPLALAHIPKLTYLYLDHN 840 LT LDL +N +G IP ++G L L+ L L NKL +PA + L+ +T ++ G IP I N +L L + + LTG IP + +L N +L + + + G ++ + + +G +P L++L LE L LS NK+ G IP + A L ++ L N Sbjct: 171 LTYLDLESNAFSGTIPQELGNLVHLKKLLLSSNKLTGTLPASLARLQNMTDFRINDLQLSGTIPSYIQNWKQLERLEMIASGLTGPIPSVISVLSNLVNLRISD--IRGPVQPFPSLK-NVTGLTKIILKNCNISGQIPTYLSHLKELETLDLSFNKLVGGIP-SFAQAENLRFIILAGN 346
BLAST of CV887370 vs. ExPASy Swiss-Prot
Match: Y2242_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At2g24230 OS=Arabidopsis thaliana GN=At2g24230 PE=2 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.456e-13 Identity = 55/201 (27.36%), Postives = 95/201 (47.26%), Query Frame = 1 Query: 187 WSGVTCSTQGDYRVVTELEVYAVSIVGPFPI-AVTNLLDLTRLDLHNNKLTGPIPPQIGRLKRLRILNLRWNKLQDVIPAEIGELKRLTHLSLSFNNFKGEIPKEIANLPELRYLYLQENRLTGRIPPELGILPNFRHLDVGNNHLVGTIRELIRFEGSFPVXXXXXXXXXXXTGGVPAQLANLTNLEILYLSHNKMSGTI 786 W G+ C ++ ++ ++ L +S+ G P + L L LDL NNK++ +P L L+ LNL +NK+ + +G +L L +S+NNF G IP+ + +L LR L L N IP L + +D+ +N L G++ + F +FP G A++ ++ L +S N+ G++ Sbjct: 57 WQGLFCDSKNEHVIM--LIASGMSLSGQIPDNTIGKLSKLQSLDLSNNKISA-LPSDFWSLNTLKNLNLSFNKISGSFSSNVGNFGQLELLDISYNNFSGAIPEAVDSLVSLRVLKLDHNGFQMSIPRGLLGCQSLVSIDLSSNQLEGSLPD--GFGSAFP-KLETLSLAGNKIHGRDTDFADMKSISFLNISGNQFDGSV 251 HSP 2 Score: 67.781 bits (164), Expect = 8.834e-11 Identity = 44/116 (37.93%), Postives = 62/116 (53.45%), Query Frame = 1 Query: 286 TNLLDLTRLDLHNNKLTGPIPPQIGRLKRLRILNLRWNKLQDVIPAEIGELKRLTHLSLSFNNFKGEIPKEIANLPELRYLYLQENRLTGRIPPELGILPNFRHLDVGNNHLVGTI 633 +N L LDL N+L+G I + LK+L+ LNL WN+ + I L L +L+LS N G IP+EI+ L +L L + N L G IP + + N +DV N+L G I Sbjct: 279 SNWFSLVYLDLSENELSGVIK-NLTLLKKLKHLNLAWNRFNRGMFPRIEMLSGLEYLNLSNTNLSGHIPREISKLSDLSTLDVSGNHLAGHIP--ILSIKNLVAIDVSRNNLTGEI 391
BLAST of CV887370 vs. ExPASy Swiss-Prot
Match: LRC40_XENTR (Leucine-rich repeat-containing protein 40 OS=Xenopus tropicalis GN=lrrc40 PE=2 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.902e-13 Identity = 62/189 (32.80%), Postives = 93/189 (49.21%), Query Frame = 1 Query: 274 PIAVTNLLDLTRLDLHNNKLTGPIPPQIGRLKRLRILNLRWNKLQDVIPAEIGELKRLTHLSLSFNNFKGEIPKEIANLPELRYLYLQENRLTGRIPPELGILPNFRHLDVGNNHLVGTIRELIRFEGSFPVXXXXXXXXXXXTGGVPAQLANLTNLEILYLSHNKMSGTIPLALAHIPKLTYLYLDHN 840 P ++ +L L LD+ NN L I +G+L L NL NKL +P EIG++K L L + +N +P +A + L LYL++N+LT PEL L + L VGNN + E ++ S V +P +++ L LE L LS+N + G++P L +P L L L+ N Sbjct: 167 PDSIGHLSILEELDVSNNCLRS-ISSSVGQLTGLVKFNLSSNKLT-ALPTEIGKMKNLKQLDCT-SNLLENVPASVAGMESLEQLYLRQNKLT--YLPELPFLTKLKELHVGNNQIQTLGPEHLQNLSSLSVLELRYNKLKV----LPEEISLLNGLERLDLSNNDL-GSLPCTLGSLPNLKSLQLEGN 345
BLAST of CV887370 vs. ExPASy Swiss-Prot
Match: RLK90_ARATH (Probable inactive receptor kinase RLK902 OS=Arabidopsis thaliana GN=RLK902 PE=1 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.484e-13 Identity = 66/214 (30.84%), Postives = 100/214 (46.73%), Query Frame = 1 Query: 28 SLICIFSLILTAAQSKT---LKRDVKALNEIKASLGWRVVYAWVXXXXXXXXXXXXWSGVTCSTQGDYRVVTELEVYAVSIVGPFPIAVT-NLLDLTRLDLHNNKLTGPIPPQIGRLKRLRILNLRWNKLQDVIPAEIGELKRLTHLSLSFNNFKGEIPKEIANLPELRYLYLQENRLTGRIPPELGILPNFRHLDVGNNHLVGTI-RELIRFE 654 +L FS++L + + L D AL ++++G R + W W+GV C D VT L + ++ G P + NL L L L N LTG +P +G LR L L+ N+ IP + L L L+L+ N F GEI NL L+ LYL+ N+L+G + L + + +V NN L G+I + L +F+ Sbjct: 11 NLSIFFSILLLSLPLPSIGDLAADKSALLSFRSAVGGRTLL-W----DVKQTSPCNWTGVLC----DGGRVTALRLPGETLSGHIPEGIFGNLTQLRTLSLRLNGLTGSLPLDLGSCSDLRRLYLQGNRFSGEIPEVLFSLSNLVRLNLAENEFSGEISSGFKNLTRLKTLYLENNKLSGSL---LDLDLSLDQFNVSNNLLNGSIPKSLQKFD 212
BLAST of CV887370 vs. ExPASy Swiss-Prot
Match: Y5815_ARATH (Probably inactive leucine-rich repeat receptor-like protein kinase At5g58150 OS=Arabidopsis thaliana GN=At5g58150 PE=1 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 3.244e-13 Identity = 64/225 (28.44%), Postives = 97/225 (43.11%), Query Frame = 1 Query: 187 WSGVTCSTQGDYRVVTELEVYAVSIVGPFPI-AVTNLLDLTRLDLHNNKLTGPIPPQIGRLKRLRILNLRWNKLQDVIPAEIGELKRLTHLSLSFNNFKGEIPKEIANLPELRYLYLQENRLTGRIPPELGILPNFRHLDVGNNHLVGTIRELIRFEGSFPVXXXXXXXXXXXTGGVPAQLANLTNLEILYLSHNKMSG----TIPLALAHIPKLTYLYLDHNQF 846 W GV + V + + + G P + + L LDL NK+T +P + L L LNL N++ + +P+ IG L L LSFN+ G+IP I+NL L L L N +PPEL + +D+ +N L ++ + F +FP+ G + L N+E + LS N+ G IP + L +L L N F Sbjct: 55 WPGVVVCDSSEN--VLHISASGLDLSGSIPDNTIGKMSKLQTLDLSGNKITS-LPSDLWSLSLLESLNLSSNRISEPLPSNIGNFMSLHTLDLSFNSISGKIPAAISNLVNLTTLKLHNNDFQFGVPPELVHCRSLLSIDLSSNRLNESLP--VGFGSAFPLLKSLNLSRNLFQGSLIGVLHE--NVETVDLSENRFDGHILQLIPGHKHNWSSLIHLDLSDNSF 272
BLAST of CV887370 vs. ExPASy Swiss-Prot
Match: LRC40_XENLA (Leucine-rich repeat-containing protein 40 OS=Xenopus laevis GN=lrrc40 PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 3.244e-13 Identity = 62/189 (32.80%), Postives = 93/189 (49.21%), Query Frame = 1 Query: 274 PIAVTNLLDLTRLDLHNNKLTGPIPPQIGRLKRLRILNLRWNKLQDVIPAEIGELKRLTHLSLSFNNFKGEIPKEIANLPELRYLYLQENRLTGRIPPELGILPNFRHLDVGNNHLVGTIRELIRFEGSFPVXXXXXXXXXXXTGGVPAQLANLTNLEILYLSHNKMSGTIPLALAHIPKLTYLYLDHN 840 P ++ +L L LD+ NN L + +G+L L NL NKL +P EIG++K L L + +N +P +A + L LYL++N+LT PEL L + L VGNN + E ++ S V +P +++ L LE L LS+N + G++P L +P L L LD N Sbjct: 167 PDSIGHLSILEELDVSNNCLRS-VSSSVGQLTGLVKFNLSSNKLT-ALPTEIGKMKNLRQLDCT-SNLLENVPASVAGMESLEQLYLRQNKLT--YLPELPFLTKLKELHVGNNQIQTLGPEHLQNLSSLSVLELRYNKLKV----LPKEISLLKGLERLDLSNNDI-GSLPDTLGSLPNLKSLQLDGN 345
BLAST of CV887370 vs. ExPASy Swiss-Prot
Match: Y5830_ARATH (Probable inactive receptor kinase At5g58300 OS=Arabidopsis thaliana GN=At5g58300 PE=1 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 5.533e-13 Identity = 62/213 (29.11%), Postives = 90/213 (42.25%), Query Frame = 1 Query: 187 WSGVTCSTQGDYRVVTELEVYAVSIVGPFPIAVTNLLDLTRLDLHNNKLTGPIPPQ-IGRLKRLRILNLRWNKLQDVIPAEIGELKRLTHLSLSFNNFKGEIPKEIANLPELRYLYLQENRLTGRIPPELGILPNFRHLDVGNNHLVGTIRELIRFEGSFPVXXXXXXXXXXXTGGVPAQLANLTNLEILYLSHNKMSGTIPLALAHIPKLTY 822 W GVTC++ G V+A+ + G L GPIPP +G+L+ LRIL+LR N L +P +I L L ++ L NNF GE+P ++ +L L L N TG+IP L L + NN L G + L + +L L LS+N ++G+IP AL P ++ Sbjct: 77 WVGVTCTSDGT-------SVHALRLPGI-------------------GLLGPIPPNTLGKLESLRILSLRSNLLSGNLPPDIHSLPSLDYIYLQHNNFSGEVPSFVSR--QLNILDLSFNSFTGKIPATFQNLKQLTGLSLQNNKLSGPVPNL-----------------------------DTVSLRRLNLSNNHLNGSIPSALGGFPSSSF 232
BLAST of CV887370 vs. ExPASy Swiss-Prot
Match: Y5020_ARATH (Probable inactive receptor kinase At5g10020 OS=Arabidopsis thaliana GN=At5g10020 PE=1 SV=2) HSP 1 Score: 74.7146 bits (182), Expect = 7.227e-13 Identity = 60/222 (27.03%), Postives = 93/222 (41.89%), Query Frame = 1 Query: 187 WSGVTCSTQGDYRVVTELEVYAVSIVGPFPIAVTNLLDLTRLDLHNNKLTGPIPPQIGRLKRLRILNLRWNKLQDVIPAEIGELKRLTHLSLSFNNFKGEIPKEIANLPELRYLYLQENRLTGRIPPELGILPNFRHLDVGNNHLVGTIRELIRFEGSFPVXXXXXXXXXXXTGG---VPAQLANLTNLEILYLSHNKMSGTIPLALAHIPKLTYLYLDHNQ 843 W G++C + + L+ +S F ++ L L L L N +G + P +G + L+ L+L N IP I EL L HL+LS N F+G P NL +LR L L +N + G + L N +D+ N G + + S G + + NLEI+ L +N+++G +P P L L L N+ Sbjct: 64 WPGISCDPETGSIIAINLDRRGLSGELKFS-TLSGLTRLRNLSLSGNSFSGRVVPSLGGISSLQHLDLSDNGFYGPIPGRISELWSLNHLNLSSNKFEGGFPSGFRNLQQLRSLDLHKNEIWGDVGEIFTELKNVEFVDLSCNRFNGGLSLPMENISSISNTLRHLNLSHNALNGKFFSEESIGSFKNLEIVDLENNQINGELP-HFGSQPSLRILKLARNE 283
BLAST of CV887370 vs. ExPASy Swiss-Prot
Match: RPKL_ARATH (Receptor protein kinase-like protein At4g34220 OS=Arabidopsis thaliana GN=At4g34220 PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.610e-12 Identity = 55/200 (27.50%), Postives = 79/200 (39.50%), Query Frame = 1 Query: 187 WSGVTCSTQGDYRVVTELEVYAVSIVGPFPIAVTNLLDLTRLDLHNNKLTGPIPPQIGRLKRLRILNLRWNKLQDVIPAEIGELKRLTHLSLSFNNFKGEIPKEIANLPELRYLYLQENRLTGRIPPELGILPNFRHLDVGNNHLVGTIRELIRFEGSFPVXXXXXXXXXXXTGGVPAQLANLTNLEILYLSHNKMSGTI 786 W+GVTC+ G ++ +T L L N L G I P + + LRIL+L N +P + L +SL NN G++PK + ++ L+ L L N TG IP + +L N + + N G I F G +P L +L L LSHNK+ G I Sbjct: 62 WTGVTCTELGKPNT-------------------PDMFRVTSLVLPNKHLLGSITPDLFSIPYLRILDLSSNFFNGSLPDSVFNATELQSISLGSNNLSGDLPKSVNSVTNLQLLNLSANAFTGEIPLNISLLKNLTVVSLSKNTFSGDI------PSGFEAAQILDLSSNLLNGSLPKDLGG-KSLHYLNLSHNKVLGEI 235
BLAST of CV887370 vs. ExPASy Swiss-Prot
Match: GEFL_DICDI (Ras guanine nucleotide exchange factor L OS=Dictyostelium discoideum GN=gefL PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.746e-12 Identity = 58/169 (34.32%), Postives = 83/169 (49.11%), Query Frame = 1 Query: 271 FPIAVTNLLDLTRLDLHNNKLTGPIPPQIGRLKRLRILNLRWNKLQDVIPAEIGELKRLTHLSLSFNNFKGEIPKEIAN-LPELRYLYLQENRLTGRIPPELGILPNFRHLDVGNNHLVGTIRELIRFEGSFPVXXXXXXXXXXXTGGVPAQLANLTNLEILYLSHNKM 774 FP + L LT L NN L IP QIG++ L+ L L N+++ IP EI LK LTHL S +N IP E+ N L +L +L+LQ N+L IP E+G + L + NN + + + E +P++L N +L+ LYL NK+ Sbjct: 154 FPSHLCELQKLTTLGFSNNLLKS-IPTQIGQMIGLKKLILSGNQMES-IPMEISNLKSLTHLDCS-SNILSSIPNELGNKLSQLSFLFLQHNKLRS-IPDEIGQCQSLVSLRLNNNSITLLPQSIGELEN-----LQELYLQENRLNTLPSELGNCCSLKKLYLEFNKL 313 The following BLAST results are available for this feature:
BLAST of CV887370 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 118
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Sequences
The
following sequences are available for this feature:
EST sequence >CV887370 ID=CV887370; Name=CV887370; organism=Citrus sinensis; type=EST; length=846bpback to top |