CV887357
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV887357 vs. ExPASy Swiss-Prot
Match: ERF3_SCHPO (Eukaryotic peptide chain release factor GTP-binding subunit OS=Schizosaccharomyces pombe GN=sup35 PE=1 SV=2) HSP 1 Score: 87.8113 bits (216), Expect = 9.550e-17 Identity = 55/184 (29.89%), Postives = 95/184 (51.63%), Query Frame = -1 Query: 379 IGTFPVGRVETGVLKPGMVVTFGPSGLTTEVKSVXMH-HEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNV 927 +GT G++E G +K V P T EV ++ E + ++ GD V V+ D++ G+V +++K+ P F +Q+ I+ P + GY+ V+ HT+ V F++L+ K+D+ + K +K P F G + ++ P+ +E F DY +GRF +RD TVAVG + + Sbjct: 480 LGTILEGKIEAGSIKKNSNVLVMPINQTLEVTAIYDEADEEISSSICGDQVRLRVRGDD-SDVQTGYVLTSTKN-PVHATTRFIAQIAILELPSILTTGYSCVMHIHTAVEEVSFAKLLHKLDKTNRKS-KKPPMFATKGMKIIAELETQTPVCMERFEDYQYMGRFTLRDQGTTVAVGKVVKI 660
BLAST of CV887357 vs. ExPASy Swiss-Prot
Match: HBS1L_HUMAN (HBS1-like protein OS=Homo sapiens GN=HBS1L PE=1 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 1.379e-15 Identity = 47/186 (25.27%), Postives = 91/186 (48.92%), Query Frame = -1 Query: 373 GIGTFPVGRVETGVLKPGMVVTFGPSGLTTEVKSVXMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNVEK 930 G G G++E G ++ G + P T VK + +H E + A GD+V + + + + G + K P + F ++++I N I G+ +L T L++ +++ +G+ +K+PKFL G +V++ +P+ +E + D+ LGRF +R T+A GV+ +++ Sbjct: 500 GSGFCITGKIEAGYIQTGDRLLAMPPNETCTVKGITLHDEPVDWAAAGDHVSLTLVGMDIIKINVGCIFCGPKV-PIKACTRFRARILIFNIEIPITKGFPVLLHYQTVSEPAVIKRLISVLNKSTGEVTKKKPKFLTKGQNALVELQTQRPIALELYKDFKELGRFMLRYGGSTIAAGVVTEIKE 684
BLAST of CV887357 vs. ExPASy Swiss-Prot
Match: HBS1L_PONAB (HBS1-like protein OS=Pongo abelii GN=HBS1L PE=2 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 2.352e-15 Identity = 47/186 (25.27%), Postives = 91/186 (48.92%), Query Frame = -1 Query: 373 GIGTFPVGRVETGVLKPGMVVTFGPSGLTTEVKSVXMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNVEK 930 G G G++E G ++ G + P T VK + +H E + A GD+V + + + + G + K P + F ++++I N I G+ +L T L++ +++ +G+ +K+PKFL G +V++ +P+ +E + D+ LGRF +R T+A GV+ +++ Sbjct: 500 GSGFCITGKIEAGYIQTGDRLLAMPPNETCTVKGITLHDEPVDWAAAGDHVSLTLVGMDIIKINVGCIFCGPKV-PIKACTRFRARILIFNIEIPITKGFPVLLHYQTVSEPAVIKRLISVLNKSTGEVTKKKPKFLTKGQNALVELQTQRPIALELYKDFKELGRFMLRYGGSTIAAGVVTEMKE 684
BLAST of CV887357 vs. ExPASy Swiss-Prot
Match: HBS1L_RAT (HBS1-like protein OS=Rattus norvegicus GN=Hbs1l PE=2 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 3.072e-15 Identity = 46/186 (24.73%), Postives = 90/186 (48.39%), Query Frame = -1 Query: 373 GIGTFPVGRVETGVLKPGMVVTFGPSGLTTEVKSVXMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNVEK 930 G G G++E G ++ G + P T K + +H E + A GD+V + + + + G + K+ P + F ++++I N I G+ +L T L++ +++ +G+ +K+PK L G +V++ +P+ +E + D+ LGRF +R TVA GV+ +++ Sbjct: 495 GSGFCVTGKIEAGYVQTGDRLLAMPPNETCTAKGITLHDEPVDWAAAGDHVSLTLVGMDIIKINVGCIFCGPKE-PIKACTRFRARILIFNIEVPITKGFPVLLHYQTVSEPAVIKRLISVLNKSTGEVTKKKPKLLTKGQNALVELQTQRPVALELYKDFKELGRFMLRYGGSTVAAGVVTEIKE 679
BLAST of CV887357 vs. ExPASy Swiss-Prot
Match: HBS1L_MOUSE (HBS1-like protein OS=Mus musculus GN=Hbs1l PE=1 SV=2) HSP 1 Score: 82.8037 bits (203), Expect = 3.072e-15 Identity = 45/186 (24.19%), Postives = 90/186 (48.39%), Query Frame = -1 Query: 373 GIGTFPVGRVETGVLKPGMVVTFGPSGLTTEVKSVXMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNVEK 930 G G G++E G ++ G + P T K + +H E + A GD+V + + + + G + K+ P + F +++++ N I G+ +L T L++ +++ +G+ +K+PK L G +V++ +P+ +E + D+ LGRF +R TVA GV+ +++ Sbjct: 498 GSGFCVTGKIEAGYIQTGDRLLAMPPNETCTAKGITLHDEPVDWAAAGDHVNLTLVGMDIIKINVGCIFCGPKE-PIKACTRFRARILVFNIEVPITKGFPVLLHYQTVSEPAVIKRLISVLNKSTGEVTKKKPKLLTKGQNALVELQTQRPVALELYKDFKELGRFMLRYGGSTVAAGVVTEIKE 682
BLAST of CV887357 vs. ExPASy Swiss-Prot
Match: HBS1L_BOVIN (HBS1-like protein OS=Bos taurus GN=HBS1L PE=2 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 8.939e-15 Identity = 45/185 (24.32%), Postives = 89/185 (48.11%), Query Frame = -1 Query: 376 GIGTFPVGRVETGVLKPGMVVTFGPSGLTTEVKSVXMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNVE 930 G G G++E G ++ G + P T K + +H E + A GD+V + + + + G + K+ P + F ++++I N I G+ +L T L++ +++ +G+ +K+PK L G +V++ +P+ +E + D+ LGRF +R T+A GV+ ++ Sbjct: 502 GSGFCVTGKIEAGYIQTGDRLLAMPPNETCTAKGITLHDEPVDWAAAGDHVSLTLVGMDIIKINVGCIFCVPKE-PIKVCTRFRARILIFNIEIPITKGFPVLLHYQTVSEPAVIKRLISVLNKSTGEVTKKKPKLLTKGQNALVELQTQRPVALELYKDFKELGRFMLRYSGSTIAAGVVTEIK 685
BLAST of CV887357 vs. ExPASy Swiss-Prot
Match: EF1A_ENCCU (Elongation factor 1-alpha OS=Encephalitozoon cuniculi GN=TEF1 PE=1 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.991e-14 Identity = 46/191 (24.08%), Postives = 94/191 (49.21%), Query Frame = -1 Query: 367 GIGTFPVGRVETGVLKPGMVVTFGPSGLTTEVKSVXMHHEALQEALPGDNVGFNVKNVAVKDLKR---GFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNVEKKD 930 G+G GRVE G + P + +T P+G+ E +SV +H++ G+N G +K + ++ + G V S + ++ A + I++ P + GY P ++ H + +++++K+ GKE+ + P+ + NG+ ++ KP+V++ + L +FA+ D V +G + +D Sbjct: 292 GVGKIFTGRVEYGTITPNLKITIQPAGVVGETRSVEIHNKPRSMIPCGENCGVALKGGVIGEIDKVDAGHVISANDENKAVAYPGAKIRTIVVGRPKGLSPGYTPQINFGNCHSPGRIAKILSKV---VGKEVHENPENVANGENFTGIVVFQKPLVIDKMERFQNLAKFALMDSNGVVGIGNVMEPLTRD 479
BLAST of CV887357 vs. ExPASy Swiss-Prot
Match: ERF3_DICDI (Eukaryotic peptide chain release factor GTP-binding subunit OS=Dictyostelium discoideum GN=erf3 PE=2 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.686e-13 Identity = 47/184 (25.54%), Postives = 88/184 (47.83%), Query Frame = -1 Query: 370 VGRVETGVLKPGMVVTFGPSGLTTEVKSVXMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQ---IGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNVEKK 912 +G+VE+G + G + P EV S+ + + A PG+N+ +K + D R + P + + V I++ P + ++ + HT+ V L+ ID ++ E++++P F K GDA +++ + + +E F+ P L RF +RD +T+A G + N+ KK Sbjct: 363 IGKVESGTISVGQSIHIMPGKTKVEVISLTGDICSFKTARPGENITIALKGIEGDDSIRPGSILAEINRPVPVVSEIEAIVYILDMPEERRLFTPSFSAIFHAHTAVEDVTVKSLIATIDTKTSTEIKQKPTFCKVGDAVKCRLVLGRAVCLEEFTTNPQLARFTIRDSTKTIAFGKVINIGKK 546
BLAST of CV887357 vs. ExPASy Swiss-Prot
Match: EFTU_BIGNA (Elongation factor Tu, chloroplastic OS=Bigelowiella natans GN=tufA PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 7.831e-11 Identity = 54/188 (28.72%), Postives = 89/188 (47.34%), Query Frame = -1 Query: 379 GIGTFPVGRVETGVLKPGMVVTFGPSGL----TTEVKSVXMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNV 930 G GT GRVE G +K G VV GL +T V + M + LQE++ GDNVG ++ + D++RG V ++ +F +QV I+ + G + P + V+ +++ KI+ E E + + GD + + +P+ +E RFA+R+ +TV GV+ NV Sbjct: 233 GRGTVATGRVERGGVKIGDVVEI--VGLRETRSTTVTGLEMFQKMLQESIAGDNVGMLLRGIQKADIQRGMVV--AQPGSITPHVSFDAQVYILTK--EEGGRHTPFFKGYRPQFYVRTTDVTGKIESLKSDEDNTEMRMVVPGDRVTMSVELVQPIAIEKGM------RFAIREGGRTVGAGVVSNV 408 The following BLAST results are available for this feature:
BLAST of CV887357 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 179
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Sequences
The
following sequences are available for this feature:
EST sequence >CV887357 ID=CV887357; Name=CV887357; organism=Citrus sinensis; type=EST; length=930bpback to top |