CV887357

Overview
NameCV887357
Unique NameCV887357
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length930
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV887357 vs. ExPASy Swiss-Prot
Match: EF1A1_CRIGR (Elongation factor 1-alpha 1 OS=Cricetulus griseus GN=EEF1A1 PE=2 SV=1)

HSP 1 Score: 300.056 bits (767), Expect = 1.224e-80
Identity = 148/187 (79.14%), Postives = 164/187 (87.70%), Query Frame = -1
Query:  370 GIGTFPVGRVETGVLKPGMVVTFGPSGLTTEVKSVXMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNVEKK 930
            GIGT PVGRVETGVLKPGMVVTF P  +TTEVKSV MHHEAL EALPGDNVGFNVKNV+VKD++RG VA +SK+DP  EAA FT+QVII+NHPGQI  GYAPVLDCHT+HIA KF+EL  KIDRRSGK+LE  PKFLK+GDA +V M+P KPM VE+FSDYPPLGRFAVRDMRQTVAVGVIK V+KK
Sbjct:  258 GIGTVPVGRVETGVLKPGMVVTFAPVNVTTEVKSVEMHHEALSEALPGDNVGFNVKNVSVKDVRRGNVAGDSKNDPPMEAAGFTAQVIILNHPGQISAGYAPVLDCHTAHIACKFAELKEKIDRRSGKKLEDGPKFLKSGDAAIVDMVPGKPMCVESFSDYPPLGRFAVRDMRQTVAVGVIKAVDKK 444          
BLAST of CV887357 vs. ExPASy Swiss-Prot
Match: EF1A1_BOVIN (Elongation factor 1-alpha 1 OS=Bos taurus GN=EEF1A1 PE=2 SV=1)

HSP 1 Score: 300.056 bits (767), Expect = 1.224e-80
Identity = 148/187 (79.14%), Postives = 164/187 (87.70%), Query Frame = -1
Query:  370 GIGTFPVGRVETGVLKPGMVVTFGPSGLTTEVKSVXMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNVEKK 930
            GIGT PVGRVETGVLKPGMVVTF P  +TTEVKSV MHHEAL EALPGDNVGFNVKNV+VKD++RG VA +SK+DP  EAA FT+QVII+NHPGQI  GYAPVLDCHT+HIA KF+EL  KIDRRSGK+LE  PKFLK+GDA +V M+P KPM VE+FSDYPPLGRFAVRDMRQTVAVGVIK V+KK
Sbjct:  258 GIGTVPVGRVETGVLKPGMVVTFAPVNVTTEVKSVEMHHEALSEALPGDNVGFNVKNVSVKDVRRGNVAGDSKNDPPMEAAGFTAQVIILNHPGQISAGYAPVLDCHTAHIACKFAELKEKIDRRSGKKLEDGPKFLKSGDAAIVDMVPGKPMCVESFSDYPPLGRFAVRDMRQTVAVGVIKAVDKK 444          
BLAST of CV887357 vs. ExPASy Swiss-Prot
Match: EF1A_EUGGR (Elongation factor 1-alpha OS=Euglena gracilis GN=TEF PE=2 SV=1)

HSP 1 Score: 299.671 bits (766), Expect = 1.599e-80
Identity = 147/191 (76.96%), Postives = 169/191 (88.48%), Query Frame = -1
Query:  358 GIGTFPVGRVETGVLKPGMVVTFGPSGLTTEVKSVXMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNVEKKDPTG 930
            GIGT PVGRVETGVLKPG VVTF P+ LTTEVKSV MHHEAL EA+PGDNVGFNVKNV+VKD++RG+VASN+K+DPA+EAA+FT+QVII+NHPGQIGNGYAPVLDCHT HIA KF+ + TKIDRRSGKELE EPKF+K+GDA +V M P KPM VE+F+DYPPLG  +  DMRQTVAVGVIK+V KK+ TG
Sbjct:  246 GIGTVPVGRVETGVLKPGDVVTFAPNNLTTEVKSVEMHHEALTEAVPGDNVGFNVKNVSVKDIRRGYVASNAKNDPAKEAADFTAQVIILNHPGQIGNGYAPVLDCHTCHIACKFATIQTKIDRRSGKELEAEPKFIKSGDAAIVLMKPQKPMCVESFTDYPPLG-VSCGDMRQTVAVGVIKSVNKKENTG 435          
BLAST of CV887357 vs. ExPASy Swiss-Prot
Match: EF1A_CAEEL (Elongation factor 1-alpha OS=Caenorhabditis elegans GN=eft-3 PE=2 SV=1)

HSP 1 Score: 297.745 bits (761), Expect = 6.076e-80
Identity = 141/188 (75.00%), Postives = 166/188 (88.30%), Query Frame = -1
Query:  367 GIGTFPVGRVETGVLKPGMVVTFGPSGLTTEVKSVXMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNVEKKD 930
            GIGT PVGRVETG++KPGMVVTF P  +TTEVKSV MHHE+L EA+PGDNVGFNVKNV+VKD++RG V S+SK DPA+EA  F +QVIIMNHPGQI NGY PVLDCHT+HIA KF+EL  K+DRR+GK++E  PKFLK+GDAG+V++IPTKP+ VE+F+DY PLGRFAVRDMRQTVAVGVIK+VEK D
Sbjct:  258 GIGTVPVGRVETGIIKPGMVVTFAPQNVTTEVKSVEMHHESLPEAVPGDNVGFNVKNVSVKDIRRGSVCSDSKQDPAKEARTFHAQVIIMNHPGQISNGYTPVLDCHTAHIACKFNELKEKVDRRTGKKVEDFPKFLKSGDAGIVELIPTKPLCVESFTDYAPLGRFAVRDMRQTVAVGVIKSVEKSD 445          
BLAST of CV887357 vs. ExPASy Swiss-Prot
Match: EF1A2_RABIT (Elongation factor 1-alpha 2 OS=Oryctolagus cuniculus GN=EEF1A2 PE=1 SV=1)

HSP 1 Score: 297.745 bits (761), Expect = 6.076e-80
Identity = 144/187 (77.01%), Postives = 163/187 (87.17%), Query Frame = -1
Query:  370 GIGTFPVGRVETGVLKPGMVVTFGPSGLTTEVKSVXMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNVEKK 930
            GIGT PVGRVETG+L+PGMVVTF P  +TTEVKSV MHHEAL EALPGDNVGFNVKNV+VKD++RG V  +SK DP +EAA FTSQVII+NHPGQI  GY+PV+DCHT+HIA KF+EL  KIDRRSGK+LE  PK LK+GDA +V+M+P KPM VE+FS YPPLGRFAVRDMRQTVAVGVIKNVEKK
Sbjct:  258 GIGTVPVGRVETGILRPGMVVTFAPVNITTEVKSVEMHHEALSEALPGDNVGFNVKNVSVKDIRRGNVCGDSKSDPPQEAAQFTSQVIILNHPGQISAGYSPVIDCHTAHIACKFAELKEKIDRRSGKKLEDNPKSLKSGDAAIVEMVPGKPMCVESFSQYPPLGRFAVRDMRQTVAVGVIKNVEKK 444          
BLAST of CV887357 vs. ExPASy Swiss-Prot
Match: EF1A2_HUMAN (Elongation factor 1-alpha 2 OS=Homo sapiens GN=EEF1A2 PE=1 SV=1)

HSP 1 Score: 297.745 bits (761), Expect = 6.076e-80
Identity = 144/187 (77.01%), Postives = 163/187 (87.17%), Query Frame = -1
Query:  370 GIGTFPVGRVETGVLKPGMVVTFGPSGLTTEVKSVXMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNVEKK 930
            GIGT PVGRVETG+L+PGMVVTF P  +TTEVKSV MHHEAL EALPGDNVGFNVKNV+VKD++RG V  +SK DP +EAA FTSQVII+NHPGQI  GY+PV+DCHT+HIA KF+EL  KIDRRSGK+LE  PK LK+GDA +V+M+P KPM VE+FS YPPLGRFAVRDMRQTVAVGVIKNVEKK
Sbjct:  258 GIGTVPVGRVETGILRPGMVVTFAPVNITTEVKSVEMHHEALSEALPGDNVGFNVKNVSVKDIRRGNVCGDSKSDPPQEAAQFTSQVIILNHPGQISAGYSPVIDCHTAHIACKFAELKEKIDRRSGKKLEDNPKSLKSGDAAIVEMVPGKPMCVESFSQYPPLGRFAVRDMRQTVAVGVIKNVEKK 444          
BLAST of CV887357 vs. ExPASy Swiss-Prot
Match: EF1A2_BOVIN (Elongation factor 1-alpha 2 OS=Bos taurus GN=EEF1A2 PE=2 SV=1)

HSP 1 Score: 297.745 bits (761), Expect = 6.076e-80
Identity = 144/187 (77.01%), Postives = 163/187 (87.17%), Query Frame = -1
Query:  370 GIGTFPVGRVETGVLKPGMVVTFGPSGLTTEVKSVXMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNVEKK 930
            GIGT PVGRVETG+L+PGMVVTF P  +TTEVKSV MHHEAL EALPGDNVGFNVKNV+VKD++RG V  +SK DP +EAA FTSQVII+NHPGQI  GY+PV+DCHT+HIA KF+EL  KIDRRSGK+LE  PK LK+GDA +V+M+P KPM VE+FS YPPLGRFAVRDMRQTVAVGVIKNVEKK
Sbjct:  258 GIGTVPVGRVETGILRPGMVVTFAPVNITTEVKSVEMHHEALSEALPGDNVGFNVKNVSVKDIRRGNVCGDSKSDPPQEAAQFTSQVIILNHPGQISAGYSPVIDCHTAHIACKFAELKEKIDRRSGKKLEDNPKSLKSGDAAIVEMVPGKPMCVESFSQYPPLGRFAVRDMRQTVAVGVIKNVEKK 444          
BLAST of CV887357 vs. ExPASy Swiss-Prot
Match: EF1A_DANRE (Elongation factor 1-alpha OS=Danio rerio GN=eef1a PE=2 SV=1)

HSP 1 Score: 297.36 bits (760), Expect = 7.936e-80
Identity = 145/187 (77.54%), Postives = 164/187 (87.70%), Query Frame = -1
Query:  370 GIGTFPVGRVETGVLKPGMVVTFGPSGLTTEVKSVXMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNVEKK 930
            GIGT PVGRVETGVLKPGMVVTF P+ +TTEVKSV MHHE+L EA PGDNVGFNVKNV+VKD++RG VA +SK+DP  EAANF +QVII+NHPGQI  GYAPVLDCHT+HIA KF+EL  KIDRRSGK+LE  PK LK+GDA +V+M+P KPM VE+FS YPPLGRFAVRDMRQTVAVGVIK+VEKK
Sbjct:  258 GIGTVPVGRVETGVLKPGMVVTFAPANVTTEVKSVEMHHESLTEATPGDNVGFNVKNVSVKDIRRGNVAGDSKNDPPMEAANFNAQVIILNHPGQISQGYAPVLDCHTAHIACKFAELKEKIDRRSGKKLEDNPKALKSGDAAIVEMVPGKPMCVESFSTYPPLGRFAVRDMRQTVAVGVIKSVEKK 444          
BLAST of CV887357 vs. ExPASy Swiss-Prot
Match: EF1AC_PORPU (Elongation factor 1-alpha C OS=Porphyra purpurea GN=TEF-C PE=2 SV=1)

HSP 1 Score: 297.36 bits (760), Expect = 7.936e-80
Identity = 143/191 (74.87%), Postives = 166/191 (86.91%), Query Frame = -1
Query:  358 GIGTFPVGRVETGVLKPGMVVTFGPSGLTTEVKSVXMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNVEKKDPTG 930
            GIGT PVGRVETGV+KPGMVVTF PSGL+TEVKSV MHHEAL +A PGDNVGFNVKNV+VKDLKRG+V  +SK+DP +  A+F +QVII+NHPG+I  GYAPVLDCHT+HIA KFSEL+ K+DRRSGK+LE  PK +K+GDA MVKM+ +KPM VE F+ YPPLGRFAVRDMRQTVAVGVIK+VEKK+  G
Sbjct:  250 GIGTVPVGRVETGVIKPGMVVTFAPSGLSTEVKSVEMHHEALTQAGPGDNVGFNVKNVSVKDLKRGYVCGDSKNDPPKGCASFNAQVIILNHPGEIHAGYAPVLDCHTAHIACKFSELILKMDRRSGKKLEDSPKMIKSGDAAMVKMVASKPMCVEAFTSYPPLGRFAVRDMRQTVAVGVIKSVEKKEVEG 440          
BLAST of CV887357 vs. ExPASy Swiss-Prot
Match: EF1A2_RHIRA (Elongation factor 1-alpha OS=Rhizomucor racemosus GN=TEF-2 PE=3 SV=1)

HSP 1 Score: 297.36 bits (760), Expect = 7.936e-80
Identity = 141/191 (73.82%), Postives = 166/191 (86.91%), Query Frame = -1
Query:  358 GIGTFPVGRVETGVLKPGMVVTFGPSGLTTEVKSVXMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNVEKKDPTG 930
            GIGT PVGRVETG +K GMVV F P+ +TTEVKSV MHHE L E LPGDNVGFNVKNV+VKD++RG V S+SK+DPA+E+A+FT+QVII+NHPGQI  GYAPVLDCHT+HIA KFSEL+ KIDRRSGK++E  PKF+K+GD+ +VKM+P+KPM VE ++DYPPLGRFAVRDMRQTVAVGVIK VEK D  G
Sbjct:  256 GIGTVPVGRVETGTIKAGMVVNFAPAAVTTEVKSVEMHHETLTEGLPGDNVGFNVKNVSVKDIRRGNVCSDSKNDPAKESASFTAQVIILNHPGQISAGYAPVLDCHTAHIACKFSELIEKIDRRSGKKMEDSPKFVKSGDSAIVKMVPSKPMCVEAYTDYPPLGRFAVRDMRQTVAVGVIKAVEKVDKAG 446          
The following BLAST results are available for this feature:
BLAST of CV887357 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 179
Match NameE-valueIdentityDescription
EF1A1_CRIGR1.224e-8079.14Elongation factor 1-alpha 1 OS=Cricetulus griseus ... [more]
EF1A1_BOVIN1.224e-8079.14Elongation factor 1-alpha 1 OS=Bos taurus GN=EEF1A... [more]
EF1A_EUGGR1.599e-8076.96Elongation factor 1-alpha OS=Euglena gracilis GN=T... [more]
EF1A_CAEEL6.076e-8075.00Elongation factor 1-alpha OS=Caenorhabditis elegan... [more]
EF1A2_RABIT6.076e-8077.01Elongation factor 1-alpha 2 OS=Oryctolagus cunicul... [more]
EF1A2_HUMAN6.076e-8077.01Elongation factor 1-alpha 2 OS=Homo sapiens GN=EEF... [more]
EF1A2_BOVIN6.076e-8077.01Elongation factor 1-alpha 2 OS=Bos taurus GN=EEF1A... [more]
EF1A_DANRE7.936e-8077.54Elongation factor 1-alpha OS=Danio rerio GN=eef1a ... [more]
EF1AC_PORPU7.936e-8074.87Elongation factor 1-alpha C OS=Porphyra purpurea G... [more]
EF1A2_RHIRA7.936e-8073.82Elongation factor 1-alpha OS=Rhizomucor racemosus ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_030G09_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_030_T7_G09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV887357 ID=CV887357; Name=CV887357; organism=Citrus sinensis; type=EST; length=930bp
CGAAAGTAGATATCAATTCCGCAGAAACAACACAATGACAAAACTTCTGA
GCCGATTCAGATGAAACCGAACCACCTCAAGTATCAATACAAACAAAGAC
CATAACTATTAATAAAATTGAGACTCCAGGTTAGAGCTGCGCCACCGCCT
GTCAAGCACCCAATTCTGGGAATCGGTACCCGACACCAAAGGCAACAAAC
TAAAACCTAAAAAGGAAAGCATGCATCGAACTATAACAGTACCAAAAATA
ACCAAGTTTGTATAACTACAATTATTAAAATAGACTCCATCTGCGGATAA
AGCAACATTAACCAACCCGATTCACTTCTTCTTGGCTGCAGACTTGGTGA
CCTTGGCACCTGTTGGATCCTTCTTTTCAACATTCTTAATCACACCAACA
GCAACAGTCTGACGCATGTCCCTAACGGCAAAACGACCAAGAGGTGGGTA
GTCAGAGAAGGTTTCAACAACCATGGGCTTGGTGGGAATCATCTTAACCA
TTCCAGCATCTCCATTCTTCAAGAACTTGGGCTCCTTCTCAAGCTCCTTG
CCTGATCGCCTATCAATCTTCGTCACGAGCTCAGAAAACTTGACGGCAAT
GTGGGAGGTGTGGCAGTCAAGCACTGGGGCATATCCATTTCCAATCTGGC
CAGGGTGGTTCATGATGATGACCTGTGAGGTGAAGTTGGCAGCTTCCCTG
GCCGGATCATCCTTCGAGTTGGAAGCAACAAAACCACGCTTGAGATCCTT
GACAGCAACGTTCTTCACGTTGAAGCCAACATTGTCACCCGGAAGGGCCT
CCTGCAGAGCTTCGTGGTGCATCTNCACAGACTTAACCTCAGTTGTCAAT
CCAGAGGGGCCAAATGTCACCACCATACCAGGCTTGAGGACACCGGTCTC
AACGCGACCCACTGGGAACGTTCCAATGCC
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