CV887346

Overview
NameCV887346
Unique NameCV887346
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length605
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV887346 vs. ExPASy Swiss-Prot
Match: DRL33_ARATH (Probable disease resistance protein At5g43740 OS=Arabidopsis thaliana GN=At5g43740 PE=2 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 1.513e-28
Identity = 74/204 (36.27%), Postives = 112/204 (54.90%), Query Frame = 1
Query:    1 LSKEEAFNLFIDGVGSSILQVPTLNKEIINEVVEECGCLPLAIVTVAASMSGEEEIYEWQNALNELRGRLRSLNDVDTKVFGRLEFSYHRLKDEKLQQCFLYCALYPEDFAIPKDELIDHWIAEGFIEEVKDVQAKYDRGHTILNRLVNCCLLESVEDGGCVKMHDLIRDMALRITS----KSPLFMVKVGLRLQEFPSEQEWK 600
            LS +EA+ LF   VG  IL+       +   V  +C  LPLA+  +  +MS +E I EW +A+N L         ++ ++   L+FSY  LK+ +++ CFLYC+L+PED  IPK++ I++WI EGFI   +      + G+ I+  LV   LL   E    VKMHD+IR+MAL I S    +     VK G  ++  P++  W+
Sbjct:  307 LSPDEAWELFRLTVGDIILRSHQDIPALARIVAAKCHGLPLALNVIGKAMSCKETIQEWSHAINVLNSAGHEFPGMEERILPILKFSYDSLKNGEIKLCFLYCSLFPEDSEIPKEKWIEYWICEGFINPNRYEDGGTNHGYDIIGLLVRAHLLIECELTDNVKMHDVIREMALWINSDFGKQQETICVKSGAHVRMIPNDINWE 510          
BLAST of CV887346 vs. ExPASy Swiss-Prot
Match: DRL32_ARATH (Probable disease resistance protein At5g43730 OS=Arabidopsis thaliana GN=At5g43730 PE=2 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 1.513e-28
Identity = 73/204 (35.78%), Postives = 114/204 (55.88%), Query Frame = 1
Query:    1 LSKEEAFNLFIDGVGSSILQVPTLNKEIINEVVEECGCLPLAIVTVAASMSGEEEIYEWQNALNELRGRLRSLNDVDTKVFGRLEFSYHRLKDEKLQQCFLYCALYPEDFAIPKDELIDHWIAEGFIEEVKDVQAKYDRGHTILNRLVNCCLLESVEDGGCVKMHDLIRDMALRITS----KSPLFMVKVGLRLQEFPSEQEWK 600
            LS +EA+ LF   VG  IL+       +   V  +C  LPLA+  +  +M  +E + EW++A+N L         ++ ++   L+FSY  LK+ +++ CFLYC+L+PEDF I KD+LI++WI EG+I   +      ++G+ I+  LV   LL   E    VKMHD+IR+MAL I S    +     VK G  ++  P++  W+
Sbjct:  308 LSPDEAWELFRLTVGDIILRSHQDIPALARIVAAKCHGLPLALNVIGKAMVCKETVQEWRHAINVLNSPGHKFPGMEERILPILKFSYDSLKNGEIKLCFLYCSLFPEDFEIEKDKLIEYWICEGYINPNRYEDGGTNQGYDIIGLLVRAHLLIECELTDKVKMHDVIREMALWINSDFGNQQETICVKSGAHVRLIPNDISWE 511          
BLAST of CV887346 vs. ExPASy Swiss-Prot
Match: DRL27_ARATH (Disease resistance protein At4g27190 OS=Arabidopsis thaliana GN=At4g27190 PE=2 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 1.513e-28
Identity = 67/179 (37.43%), Postives = 107/179 (59.78%), Query Frame = 1
Query:    1 LSKEEAFNLFIDGVGSSILQVPTLNKEIINEVVEECGCLPLAIVTVAASMSGEEEIYEWQNALNELRGRLRSLNDVDTKVFGRLEFSYHRLKDEKLQQCFLYCALYPEDFAIPKDELIDHWIAEGFIEEVKDVQAKYDRGHTILNRLVNCCLLESVEDGGCVKMHDLIRDMALRITSKS 537
            L +E+A+ LF    G  +       ++I   V +ECG LPLAI+TV  +M G++ +  W + L++L   +  +  ++ K+F  L+ SY  L+D K + CFL CAL+PED++I   E++ +W+AEGF+EE+   +   + G T +  L + CLLE  +    VKMHD++RD A+ I S S
Sbjct:  302 LLEEDAWELFCKNAGDVVRSDHV--RKIAKAVSQECGGLPLAIITVGTAMRGKKNVKLWNHVLSKLSKSVPWIKSIEEKIFQPLKLSYDFLED-KAKFCFLLCALFPEDYSIEVTEVVRYWMAEGFMEELGSQEDSMNEGITTVESLKDYCLLEDGDRRDTVKMHDVVRDFAIWIMSSS 477          
BLAST of CV887346 vs. ExPASy Swiss-Prot
Match: DRL14_ARATH (Probable disease resistance protein At1g62630 OS=Arabidopsis thaliana GN=At1g62630 PE=2 SV=2)

HSP 1 Score: 124.405 bits (311), Expect = 4.403e-28
Identity = 71/206 (34.47%), Postives = 111/206 (53.88%), Query Frame = 1
Query:    1 LSKEEAFNLFIDGVGSSILQVPTLNKEIINEVVEECGCLPLAIVTVAASMSGEEEIYEWQNALNELRGRLRSLNDVDTKVFGRLEFSYHRLKDEKLQQCFLYCALYPEDFAIPKDELIDHWIAEGFIEEVKDVQAKYDRGHTILNRLVNCCLLESVED---GGCVKMHDLIRDMALRITS----KSPLFMVKVGLRLQEFPSEQEW 597
            L +  AF+LF   VG   L       ++   V ++C  LPLA+  +  +MS +  I EW+NA++ L         ++ K+   L++SY  LK E ++   LYCALYPED  I K++LI+HWI E  I+  + ++   D+G+ I+  LV   LL    D      V MHD++R+MAL I S    +   F+V+ G+ ++E P  + W
Sbjct:  309 LEENVAFDLFQKKVGQKTLGSDPGIPQLARIVAKKCCGLPLALNVIGETMSCKRTIQEWRNAIHVLNSYAAEFIGMEDKILPLLKYSYDNLKGEHVKSSLLYCALYPEDAKIRKEDLIEHWICEEIIDGSEGIEKAEDKGYDIIGSLVRASLLMECVDLKGKSSVIMHDVVREMALWIASELGIQKEAFIVRAGVGVREIPKVKNW 514          
BLAST of CV887346 vs. ExPASy Swiss-Prot
Match: RFL1_ARATH (Disease resistance protein RFL1 OS=Arabidopsis thaliana GN=RFL1 PE=2 SV=2)

HSP 1 Score: 124.02 bits (310), Expect = 5.751e-28
Identity = 72/206 (34.95%), Postives = 116/206 (56.31%), Query Frame = 1
Query:    1 LSKEEAFNLFIDGVGSSILQVPTLNKEIINEVVEECGCLPLAIVTVAASMSGEEEIYEWQNALNELRGRLRSLNDVDTKVFGRLEFSYHRLKDEKLQQCFLYCALYPEDFAIPKDELIDHWIAEGFIEEVKDVQAKYDRGHTILNRLV-NCCLLESVEDGGCVKMHDLIRDMALRITS----KSPLFMVKVGLRLQEFPSEQEWKA 603
            L    A++L    VG + L       ++  +V E+C  LPLA+  +  +MS +  I EW++A  E+       + ++ ++   L++SY  L  E  + CFLYC+L+PEDF I K+ LI++WI EGFI+E +  +  +++G+ IL  LV +  LLE  +D   V MHD++R+MAL I S         +V+ G+ L E P  + W+A
Sbjct:  313 LDTGNAWDLLKKKVGENTLGSHPDIPQLARKVSEKCCGLPLALNVIGETMSFKRTIQEWRHA-TEVLTSATDFSGMEDEILPILKYSYDSLNGEDAKSCFLYCSLFPEDFEIRKEMLIEYWICEGFIKEKQGREKAFNQGYDILGTLVRSSLLLEGAKDKDVVSMHDMVREMALWIFSDLGKHKERCIVQAGIGLDELPEVENWRA 517          
BLAST of CV887346 vs. ExPASy Swiss-Prot
Match: DRL2_ARATH (Probable disease resistance protein At1g12290 OS=Arabidopsis thaliana GN=At1g12290 PE=2 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 2.185e-27
Identity = 74/209 (35.41%), Postives = 112/209 (53.59%), Query Frame = 1
Query:    1 LSKEEAFNLFIDGVGSSILQVPTLNKEIINEVVEECGCLPLAIVTVAASMSGEEEIYEWQNALNELRGRLRSLNDVDTKVFGRLEFSYHRLKDEKLQQCFLYCALYPEDFAIPKDELIDHWIAEGFIEEVKDVQAKYDRGHTILNRLVNCCLLESVEDG-----GCVKMHDLIRDMALRITS----KSPLFMVKVGLRLQEFPSEQEWK 600
            L  ++A++LF   VG   L       EI  +V + C  LPLA+  +  +M+ ++   EW  A++       +   V  ++   L++SY  L+ E ++ CFLYC+L+PED  I K+ LID+WI EGFI+  ++ +     G+ IL  LV   LL  VE G       VKMHD++R+MAL I S         +V+ G RL E P  ++WK
Sbjct:  312 LGADDAWDLFKKKVGDITLSSHPDIPEIARKVAQACCGLPLALNVIGETMACKKTTQEWDRAVDVSTTYAANFGAVKERILPILKYSYDNLESESVKTCFLYCSLFPEDDLIEKERLIDYWICEGFIDGDENKKGAVGEGYEILGTLVCASLL--VEGGKFNNKSYVKMHDVVREMALWIASDLRKHKDNCIVRAGFRLNEIPKVKDWK 518          
BLAST of CV887346 vs. ExPASy Swiss-Prot
Match: DRL38_ARATH (Probable disease resistance protein At5g47260 OS=Arabidopsis thaliana GN=At5g47260 PE=2 SV=2)

HSP 1 Score: 119.783 bits (299), Expect = 1.085e-26
Identity = 67/200 (33.50%), Postives = 113/200 (56.50%), Query Frame = 1
Query:    1 LSKEEAFNLFIDGVGSSILQVPTLNKEIINEVVEECGCLPLAIVTVAASMSGEEEIYEWQNALNELRGRLRSLNDVDTKVFGRLEFSYHRLKDEKLQQCFLYCALYPEDFAIPKDELIDHWIAEGFIEEVKDVQAKYDRGHTILNRLVNCCLLESVEDGGCVKMHDLIRDMALRITSKSPLFMVKVGLRLQEFPSEQEWK 600
            LS EEA++LF + VG + L+      ++   V   C  LPLA+  +  +MSG+  + EW+  ++ L        D++      L+  Y  + DE ++ CFLYCAL+PE+  I K++L+++WI EG + + +D +    +G+ I+  LV   LL    +G CVKMH ++R+MAL I S+   F+V  G R+ +  +  +W+
Sbjct:  301 LSPEEAWDLFQETVGENTLRSHQDIPKLARVVASTCRGLPLALNLIGEAMSGKRTVREWRYTIHVLASSTAEFPDMEDGTLPILKSIYDNMSDEIIRLCFLYCALFPENLDIGKEDLVNYWICEGILAK-EDREEAEIQGYEIICDLVRMRLLMESGNGNCVKMHGMVREMALWIASEH--FVVVGGERIHQMLNVNDWR 497          
BLAST of CV887346 vs. ExPASy Swiss-Prot
Match: DRL19_ARATH (Putative disease resistance protein At1g63350 OS=Arabidopsis thaliana GN=At1g63350 PE=2 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 1.416e-26
Identity = 70/206 (33.98%), Postives = 115/206 (55.83%), Query Frame = 1
Query:    1 LSKEEAFNLFIDGVGSSILQVPTLNKEIINEVVEECGCLPLAIVTVAASMSGEEEIYEWQNALNELRGRLRSLNDVDTKVFGRLEFSYHRLKDEKLQQCFLYCALYPEDFAIPKDELIDHWIAEGFIEEVKDVQAKYDRGHTILNRLVNCCLL-ESVEDGGC--VKMHDLIRDMALRITS----KSPLFMVKVGLRLQEFPSEQEW 597
            L+  +A++LF   VG   L      +E+   V ++C  LPLA+  V+ +MS +  + EW++A+  L       + +D K+   L++SY  LK E ++ C LYCAL+PED  I K+ LI++WI E  I+  + +    ++G+ I+  LV   LL E VE  G   V +HD++R+MAL I S    ++  F+V+  + L+E    + W
Sbjct:  309 LADNDAYDLFQKKVGQITLGSDPEIRELSRVVAKKCCGLPLALNVVSETMSCKRTVQEWRHAIYVLNSYAAKFSGMDDKILPLLKYSYDSLKGEDVKMCLLYCALFPEDAKIRKENLIEYWICEEIIDGSEGIDKAENQGYEIIGSLVRASLLMEEVELDGANIVCLHDVVREMALWIASDLGKQNEAFIVRASVGLREILKVENW 514          
BLAST of CV887346 vs. ExPASy Swiss-Prot
Match: DRL37_ARATH (Probable disease resistance protein At5g47250 OS=Arabidopsis thaliana GN=At5g47250 PE=2 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 4.121e-26
Identity = 71/202 (35.15%), Postives = 113/202 (55.94%), Query Frame = 1
Query:    1 LSKEEAFNLFIDGVGSSILQVPTLNKEIINEVVEECGCLPLAIVTVAASMSGEEEIYEWQNALNELRGRLRSLNDVDTKVFGRLEFSYHRLKDEKLQQCFLYCALYPEDFAIPKDELIDHWIAEGFIEEVKDVQAKYDRGHTILNRLVNCCLLESVEDGGCVKMHDLIRDMALRITSK---SPLFMVKVGLRLQEFPSEQEW 597
            LS+ +A++LF   V    L   +   +I  ++V +C  LPLA+  +  +M+ +  + +W+ AL+ L      +   +  +F  L+ SY  LK  K  +CFLYCAL+P+ + I +DEL+++WI EGFI+E    +   DRG+ I++ LV   LL  +E    V MHD+IRDMAL I S+      ++VK    L + P   +W
Sbjct:  313 LSENDAWDLFDMKVHCDGLNEIS---DIAKKIVAKCCGLPLALEVIRKTMASKSTVIQWRRALDTLESYRSEMKGTEKGIFQVLKLSYDYLKT-KNAKCFLYCALFPKAYYIKQDELVEYWIGEGFIDEKDGRERAKDRGYEIIDNLVGAGLL--LESNKKVYMHDMIRDMALWIVSEFRDGERYVVKTDAGLSQLPDVTDW 508          
BLAST of CV887346 vs. ExPASy Swiss-Prot
Match: DRL5_ARATH (Probable disease resistance protein At1g51480 OS=Arabidopsis thaliana GN=At1g51480 PE=2 SV=2)

HSP 1 Score: 117.472 bits (293), Expect = 5.383e-26
Identity = 71/205 (34.63%), Postives = 112/205 (54.63%), Query Frame = 1
Query:    1 LSKEEAFNLFIDGVGSSILQVPTLNKEIINEVVEECGCLPLAIVTVAASMSGEEEIYEWQNALNELRGRL-RSLNDVDTKVFGRLEFSYHRLKDEKLQQCFLYCALYPEDFAIPKDELIDHWIAEGFIEEVKDVQAKYDRGHTILNRLVNCCLLESVEDGGCVKMHDLIRDMALRITS----KSPLFMVKVGLRLQEFPSEQEWK 600
            LS +EA+ LF   V   IL        +   V  +C  LPLA++ +  +M+ +E I EW +A+N L          ++ ++   L+FSY  LK+ +++ CFLYC+L+PEDF I K++LI++WI EG+I   +      ++G+ I+  LV   LL   E    VKMH +IR+MAL I S    +     VK G  ++  P++  W+
Sbjct:  309 LSPDEAWELFRITVDDVILSSHEDIPALARIVAAKCHGLPLALIVIGEAMACKETIQEWHHAINVLNSPAGHKFPGMEERILLVLKFSYDSLKNGEIKLCFLYCSLFPEDFEIEKEKLIEYWICEGYINPNRYEDGGTNQGYDIIGLLVRAHLLIECELTTKVKMHYVIREMALWINSDFGKQQETICVKSGAHVRMIPNDINWE 513          
The following BLAST results are available for this feature:
BLAST of CV887346 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 36
Match NameE-valueIdentityDescription
DRL33_ARATH1.513e-2836.27Probable disease resistance protein At5g43740 OS=A... [more]
DRL32_ARATH1.513e-2835.78Probable disease resistance protein At5g43730 OS=A... [more]
DRL27_ARATH1.513e-2837.43Disease resistance protein At4g27190 OS=Arabidopsi... [more]
DRL14_ARATH4.403e-2834.47Probable disease resistance protein At1g62630 OS=A... [more]
RFL1_ARATH5.751e-2834.95Disease resistance protein RFL1 OS=Arabidopsis tha... [more]
DRL2_ARATH2.185e-2735.41Probable disease resistance protein At1g12290 OS=A... [more]
DRL38_ARATH1.085e-2633.50Probable disease resistance protein At5g47260 OS=A... [more]
DRL19_ARATH1.416e-2633.98Putative disease resistance protein At1g63350 OS=A... [more]
DRL37_ARATH4.121e-2635.15Probable disease resistance protein At5g47250 OS=A... [more]
DRL5_ARATH5.383e-2634.63Probable disease resistance protein At1g51480 OS=A... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_030G04_T3 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_030_T3_G04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV887346 ID=CV887346; Name=CV887346; organism=Citrus sinensis; type=EST; length=605bp
CTTTCTAAAGAGGAGGCATTTAATTTGTTCATAGACGGAGTTGGTAGTAG
CATTTTGCAAGTTCCAACTTTGAATAAAGAAATCATAAACGAAGTTGTTG
AGGAATGTGGTTGTTTACCGCTGGCAATTGTAACTGTAGCTGCTTCCATG
AGCGGCGAAGAAGAAATTTATGAATGGCAAAATGCGCTCAATGAATTGCG
TGGACGGCTGAGAAGTTTGAATGACGTAGATACTAAAGTGTTTGGGCGAT
TAGAATTCAGTTACCATCGCTTGAAAGATGAAAAGCTCCAACAGTGCTTC
TTGTATTGTGCATTGTATCCTGAAGACTTTGCCATTCCAAAGGATGAGCT
GATAGATCATTGGATTGCAGAAGGGTTTATCGAAGAAGTGAAGGATGTCC
AAGCAAAATATGATAGAGGGCATACTATATTGAACAGGCTTGTAAATTGC
TGCTTATTGGAAAGCGTCGAAGATGGAGGTTGTGTGAAGATGCATGATCT
TATAAGAGACATGGCGTTACGCATTACAAGCAAGAGTCCTTTATTCATGG
TGAAAGTTGGCCTACGTTTGCAAGAATTTCCCAGTGAACAAGAATGGAAA
GCGAA
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