CV887346
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV887346 vs. ExPASy Swiss-Prot
Match: RPS2_ARATH (Disease resistance protein RPS2 OS=Arabidopsis thaliana GN=RPS2 PE=1 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 9.181e-26 Identity = 66/207 (31.88%), Postives = 113/207 (54.59%), Query Frame = 1 Query: 1 LSKEEAFNLFIDGVGSSILQVPTLNKEIINEVVEECGCLPLAIVTVAASMSGEEEIYEWQNA---LNELRGRLRSLNDVDTKVFGRLEFSYHRLKDEKLQQCFLYCALYPEDFAIPKDELIDHWIAEGFIEEVKDVQAKYDRGHTILNRLVNCCLLESVEDGGCVKMHDLIRDMALRITSK----SPLFMVKVGLRLQEFPSEQEWK 600 L K+ A+ LF V L + + + +V +CG LPLA++T+ +M+ E EW +A L ++ +N VF L+FSY L+ + L+ CFLYCAL+PE+ +I ++L+++W+ EGF+ V Y +G+ ++ L CLLE+ ++ VKMH+++R AL + S+ L +V+ + E P + W+ Sbjct: 310 LEKKHAWELFCSKVWRKDLLESSSIRRLAEIIVSKCGGLPLALITLGGAMAHRETEEEWIHASEVLTRFPAEMKGMN----YVFALLKFSYDNLESDLLRSCFLYCALFPEEHSIEIEQLVEYWVGEGFLTSSHGVNTIY-KGYFLIGDLKAACLLETGDEKTQVKMHNVVRSFALWMASEQGTYKELILVEPSMGHTEAPKAENWR 511
BLAST of CV887346 vs. ExPASy Swiss-Prot
Match: DRL18_ARATH (Probable disease resistance protein At1g61310 OS=Arabidopsis thaliana GN=At1g61310 PE=2 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 1.566e-25 Identity = 71/216 (32.87%), Postives = 113/216 (52.31%), Query Frame = 1 Query: 1 LSKEEAFNLFIDGVGSSILQVPTLNKEIINEVVEECGCLPLAIVTVAASMSGEEEIYEWQNALNELRGRLRSLNDVDTKVFGRLEFSYHRLKDEKLQQCFLYCALYPEDFAIPKDELIDHWIAEGFIEEVKDVQAKYDRGHTILNRLVNCCLLESVEDG-----------GCVKMHDLIRDMALRITS----KSPLFMVKVGLRLQEFPSEQEWKA 603 L E+A+ LF + VG + L + + EV ++C LPLA+ + +M+ + + EW+ A++ L + ++ K+ L++SY L DE ++ CFLYCAL+PED I + LID I EGFI E + ++ ++G+ +L L LL V CV MHD++R+MAL I S + F+V+ L E P ++W A Sbjct: 311 LEPEDAWELFKNKVGDNTLSSDPVIVGLAREVAQKCRGLPLALNVIGETMASKTMVQEWEYAIDVLTRSAAEFSGMENKILPILKYSYDSLGDEHIKSCFLYCALFPEDGQIYTETLIDKLICEGFIGEDQVIKRARNKGYAMLGTLTRANLLTKVGTELANLLTKVSIYHCV-MHDVVREMALWIASDFGKQKENFVVQASAGLHEIPEVKDWGA 525
BLAST of CV887346 vs. ExPASy Swiss-Prot
Match: DRL31_ARATH (Putative disease resistance protein At5g05400 OS=Arabidopsis thaliana GN=At5g05400 PE=2 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 2.671e-25 Identity = 65/204 (31.86%), Postives = 114/204 (55.88%), Query Frame = 1 Query: 10 EEAFNLFIDGVGSSILQVPTLNKEIINEVVEECGCLPLAIVTVAASMSGEEEIYEWQNALNELRGRLRSLNDVDTKVFGRLEFSYHRLKDEKLQQCFLYCALYPEDFAIPKDELIDHWIAEGFIEEVKDVQAKYDRGHTILNRLVNCCLLESVEDGGCVKMHDLIRDMALRITS------KSPLFMVKVGLRLQEFPSEQEWKA 603 ++A++LF + ++ P + E+ + +C LPLA+ + +M+ ++ I EW +A+ G ++ + L+FSY LK EK + CFL+ AL+PED+ I KD+LI++W+ +G I K + K G+TI+ L LL+ E VKMHD++R+MAL I+S + + +V+ +L++ P ++ KA Sbjct: 314 DDAWDLFTRNMKETLESHPKI-PEVAKSIARKCNGLPLALNVIGETMARKKSIEEWHDAVGVFSG-------IEADILSILKFSYDDLKCEKTKSCFLFSALFPEDYEIGKDDLIEYWVGQGIILGSKGINYK---GYTIIGTLTRAYLLKESETKEKVKMHDVVREMALWISSGCGDQKQKNVLVVEANAQLRDIPKIEDQKA 506
BLAST of CV887346 vs. ExPASy Swiss-Prot
Match: R13L4_ARATH (Disease resistance RPP13-like protein 4 OS=Arabidopsis thaliana GN=RPP13L4 PE=2 SV=2) HSP 1 Score: 83.9593 bits (206), Expect = 6.595e-16 Identity = 50/159 (31.45%), Postives = 81/159 (50.94%), Query Frame = 1 Query: 76 KEIINEVVEECGCLPLAIVTVAASMSGEEEIY-EWQNALNELRGRLRSLNDVDTKVFGRLEFSYHRLKDEKLQQCFLYCALYPEDFAIPKDELIDHWIAEGFIEEVKDVQAKYDRGHTILNRLVNCCLLESVED--GGCV---KMHDLIRDMALRITSK 534 +++ E+V +C LPL I V + ++ +Y EW+ + LR V L+ SY L L+ C L +LYPED IPK +L+ WI EGF+ ++ ++ + G + L N CL+E V+ G + K+HD++RD+ + I K Sbjct: 345 EDVGKEIVTKCKGLPLTIKAVGGLLLCKDHVYHEWRRIAEHFQDELRGNTSETDNVMSSLQLSYDELPSH-LKSCILTLSLYPEDCVIPKQQLVHGWIGEGFV-MWRNGRSATESGEDCFSGLTNRCLIEVVDKTYSGTIITCKIHDMVRDLVIDIAKK 501
BLAST of CV887346 vs. ExPASy Swiss-Prot
Match: RGA1_SOLBU (Putative disease resistance protein RGA1 OS=Solanum bulbocastanum GN=RGA1 PE=2 SV=2) HSP 1 Score: 81.2629 bits (199), Expect = 4.275e-15 Identity = 54/180 (30.00%), Postives = 95/180 (52.78%), Query Frame = 1 Query: 1 LSKEEAFNLFIDGVGSSILQVPTLNKEIINEVVEECGCLPLAIVTVAASMSGEEEIYEWQNALNELRGRLRSLNDVDTKVFGRLEFSYHRLKDEKLQQCFLYCALYPEDFAIPKDELIDHWIAEGFIEEVKDVQAKYDRGHTILNRLVNCCLLESVE-DGG--CVKMHDLIRDMALRITS 531 LS E+ + LF+ ++ I E+V++CG +PLA T+ + + E EW++ + + +L ++ + L SYH L + L+QCF+YCA++P+D + K+ LI W+A GF+ +++ + D G+ + N L + +E + G KMHDLI D+A + S Sbjct: 311 LSPEDCWFLFMQRAFGHQEEINPNLMAIGKEIVKKCGGVPLAAKTLGGILRFKREEREWEHVRDS---PIWNLPQDESSILPALRLSYHHLPLD-LRQCFVYCAVFPKDTKMAKENLIAFWMAHGFLLSKGNLELE-DVGNEVWNELYLRSFFQEIEVESGKTYFKMHDLIHDLATSLFS 485
BLAST of CV887346 vs. ExPASy Swiss-Prot
Match: RGA3_SOLBU (Putative disease resistance protein RGA3 OS=Solanum bulbocastanum GN=RGA3 PE=2 SV=2) HSP 1 Score: 80.1073 bits (196), Expect = 9.523e-15 Identity = 56/182 (30.77%), Postives = 91/182 (50.00%), Query Frame = 1 Query: 1 LSKEEAFNLFIDGVGSSILQVPTLNKEIINEVVEECGCLPLAIVTVAASMSGEEEIYEWQNALNELRGRLRSLNDVDTKVFGRLEFSYHRLKDEKLQQCFLYCALYPEDFAIPKDELIDHWIAEGFIEEVKDVQAKYDRGHTILNRLVNCCLLESVE---DGGCVKMHDLIRDMALRITSKS 537 LS+E+ + LF + EI E+V++CG +PLA T+ + + E EW++ + + +L + V L SYH L + L+QCF YCA++P+D I K+ LI W+A F+ +++ + D G+ + N L + +E KMHDLI D+A + S S Sbjct: 311 LSQEDCWLLFKQRAFCHQTETSPKLMEIGKEIVKKCGGVPLAAKTLGGLLRFKREESEWEHVRDS---EIWNLPQDENSVLPALRLSYHHLPLD-LRQCFAYCAVFPKDTKIEKEYLIALWMAHSFLLSKGNMELE-DVGNEVWNELYLRSFFQEIEVKSGKTYFKMHDLIHDLATSMFSAS 487
BLAST of CV887346 vs. ExPASy Swiss-Prot
Match: R13L3_ARATH (Putative disease resistance RPP13-like protein 3 OS=Arabidopsis thaliana GN=RPP13L3 PE=2 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.244e-14 Identity = 58/178 (32.58%), Postives = 103/178 (57.87%), Query Frame = 1 Query: 1 LSKEEAFNLFIDGVGSSILQVPTLNKEIINEVVEECGCLPLAIVTVAASMSGEEEIYEWQNALNELRGRLRSLNDVDTKVFGRLEFSYHRLKDEKLQQCFLYCALYPEDFAIPKDELIDHWIAEGFIEEVKDVQAKYDRGHTILNRLVNCCLL--ESVEDGGCV--KMHDLIRDMALR 522 L+ EE++ LF S+I +V + E+V++CG LPLAIV ++ +S + EW L RL+ + + VF + S+ ++ E L+ CFLY +++PED+ I ++LI +AEGFI+E +++ + D ++ LV+ L+ E +E G + ++HDL+RD+A++ Sbjct: 327 LTFEESWTLFERKAFSNIEKVDEDLQRTGKEMVKKCGGLPLAIVVLSGLLS-RKRTNEWHEVCASLWRRLKDNSIHISTVF---DLSFKEMRHE-LKLCFLYFSVFPEDYEIKVEKLIHLLVAEGFIQEDEEMMME-DVARCYIDELVDRSLVKAERIERGKVMSCRIHDLLRDLAIK 498
BLAST of CV887346 vs. ExPASy Swiss-Prot
Match: RGA4_SOLBU (Putative disease resistance protein RGA4 OS=Solanum bulbocastanum GN=RGA4 PE=2 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 2.122e-14 Identity = 48/152 (31.58%), Postives = 82/152 (53.95%), Query Frame = 1 Query: 91 EVVEECGCLPLAIVTVAASMSGEEEIYEWQNALNELRGRLRSLNDVDTKVFGRLEFSYHRLKDEKLQQCFLYCALYPEDFAIPKDELIDHWIAEGFIEEVKDVQAKYDRGHTILNRLVNCCLLESVE---DGGCVKMHDLIRDMALRITSKS 537 E+V++CG +PLA T+ + + E EW++ + + SL ++ + L SYH L + L+QCF YCA++P+D + K+ LI W+A GF+ +++ + D G+ + N L + +E K+HDLI D+A + S S Sbjct: 343 EIVKKCGGVPLAAKTLGGLLRFKREESEWEHVRDN---EIWSLPQDESSILPALRLSYHHLPLD-LRQCFAYCAVFPKDTKMIKENLITLWMAHGFLLSKGNLELE-DVGNEVWNELYLRSFFQEIEAKSGNTYFKIHDLIHDLATSLFSAS 489
BLAST of CV887346 vs. ExPASy Swiss-Prot
Match: RPM1_ARATH (Disease resistance protein RPM1 OS=Arabidopsis thaliana GN=RPM1 PE=1 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 2.771e-14 Identity = 56/183 (30.60%), Postives = 100/183 (54.64%), Query Frame = 1 Query: 1 LSKEEAFNLFID-GVGSSILQVPTLNKE-IINEVVEECGCLPLAIVTVAASMSGEEEIYEWQNALNELRGRLRSLNDVDTKVFGRLEFSYHRLKDEKLQQCFLYCALYPEDFAIPKDELIDHWIAEGFIEEVKDVQAKYDRGHTILNRLVNCCLLESV-----EDGGCVKMHDLIRDMALRIT 528 L ++EA+ LF + +S+ Q T N E I ++VE C LPLAI ++ + MS ++ EW+ + L L N+ + K+ + F L++CFLYC+L+P ++ + + LI W+A+ F+E ++ V+A+ + + LN LV +L+ + KMHD+I ++AL ++ Sbjct: 336 LKEDEAWVLFSNKAFPASLEQCRTQNLEPIARKLVERCQGLPLAIASLGSMMSTKKFESEWKKVYSTLNWELN--NNHELKIVRSIMFLSFNDLPYPLKRCFLYCSLFPVNYRMKRKRLIRMWMAQRFVEPIRGVKAE-EVADSYLNELVYRNMLQVILWNPFGRPKAFKMHDVIWEIALSVS 515
BLAST of CV887346 vs. ExPASy Swiss-Prot
Match: R13L1_ARATH (Putative disease resistance RPP13-like protein 1 OS=Arabidopsis thaliana GN=RPPL1 PE=2 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 3.619e-14 Identity = 51/175 (29.14%), Postives = 93/175 (53.14%), Query Frame = 1 Query: 1 LSKEEAFNLFIDGVGSSILQVPTLNKEI---INEVVEECGCLPLAIVTVAASMSGEEEIYEWQNALNELRGRLRSLNDVDTKVFGRLEFSYHRLKDEKLQQCFLYCALYPEDFAIPKDELIDHWIAEGFIEEVKDVQAKYDRGHTILNRLVNCCLLESVEDGGCVKMHDLIRDMA 516 LS + ++LF+ V + Q P LN+EI +V +C LPLA+ T+ + E ++ EW+ L+ R+ L + + L SY+ L L++CF YC+++P+ A KD+++ W+AEGF+++ + + + G+ + L + LL+ + MHD I ++A Sbjct: 334 LSDGDCWSLFMKTVFGN--QEPCLNREIGDLAERIVHKCRGLPLAVKTLGGVLRFEGKVIEWERVLSS---RIWDLPADKSNLLPVLRVSYYYLPAH-LKRCFAYCSIFPKGHAFEKDKVVLLWMAEGFLQQTRSSKNLEELGNEYFSELESRSLLQKTKTR--YIMHDFINELA 500 The following BLAST results are available for this feature:
BLAST of CV887346 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 36
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Sequences
The
following sequences are available for this feature:
EST sequence >CV887346 ID=CV887346; Name=CV887346; organism=Citrus sinensis; type=EST; length=605bpback to top |