CV887346
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV887346 vs. ExPASy Swiss-Prot
Match: RGA2_SOLBU (Disease resistance protein RGA2 OS=Solanum bulbocastanum GN=RGA2 PE=1 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 8.913e-13 Identity = 52/180 (28.89%), Postives = 93/180 (51.67%), Query Frame = 1 Query: 1 LSKEEAFNLFIDGVGSSILQVPTLNKEIINEVVEECGCLPLAIVTVAASMSGEEEIYEWQNALNELRGRLRSLNDVDTKVFGRLEFSYHRLKDEKLQQCFLYCALYPEDFAIPKDELIDHWIAEGFIEEVKDVQAKYDRGHTILNRLVNCCLLESVE--DGGC-VKMHDLIRDMALRITS 531 LS+E+ + LF+ ++ I E+V++ G +PLA T+ + + E W++ + + +L ++ + L SYH+L + L+QCF YCA++P+D + K++LI W+A GF+ +++ + D G + L + +E DG KMHDLI D+A + S Sbjct: 312 LSQEDCWLLFMQRAFGHQEEINPNLVAIGKEIVKKSGGVPLAAKTLGGILCFKREERAWEHVRDS---PIWNLPQDESSILPALRLSYHQLPLD-LKQCFAYCAVFPKDAKMEKEKLISLWMAHGFLLSKGNMELE-DVGDEVWKELYLRSFFQEIEVKDGKTYFKMHDLIHDLATSLFS 486
BLAST of CV887346 vs. ExPASy Swiss-Prot
Match: R13L2_ARATH (Putative disease resistance RPP13-like protein 2 OS=Arabidopsis thaliana GN=RPP13L2 PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 1.986e-12 Identity = 53/178 (29.78%), Postives = 96/178 (53.93%), Query Frame = 1 Query: 1 LSKEEAFNLFIDGVGSSILQVPTLNKEIINEVVEECGCLPLAIVTVAASMSGEEEIYEWQNALNELRGRLRSLNDVDTKVFGRLEFSYHRLKDEKLQQCFLYCALYPEDFAIPKDELIDHWIAEGFIEEVKDVQAKYDRGHTILNRLVNCCLLESVEDGG----CVKMHDLIRDMALR 522 L+ +E++NLF IL+V ++I E+V++CG LP V +A MS ++ EW + + LR + D + V + S+ + E L+ CFLY +++PED+ + ++LI +AEGFI+E +++ + D + LV L+E V+ ++HDL+R+ ++ Sbjct: 322 LTFKESWNLFEKKAFRYILKVDQELQKIGKEMVQKCGGLPRTTVVLAGLMSRKKP-NEWNDVWSSLR-----VKDDNIHVSSLFDLSFKDMGHE-LKLCFLYLSVFPEDYEVDVEKLIQLLVAEGFIQEDEEMTME-DVARYYIEDLVYISLVEVVKRKKGKLMSFRIHDLVREFTIK 491
BLAST of CV887346 vs. ExPASy Swiss-Prot
Match: RPP13_ARATH (Disease resistance protein RPP13 OS=Arabidopsis thaliana GN=RPP13 PE=2 SV=2) HSP 1 Score: 70.4774 bits (171), Expect = 7.546e-12 Identity = 57/179 (31.84%), Postives = 99/179 (55.31%), Query Frame = 1 Query: 1 LSKEEAFNLFIDGVGSSILQVPTLNKEIINEVVEECGCLPLAIVTVAASMSGEEEIYEWQNALNELRGRLRSLN-DVDTKVFGRLEFSYHRLKDEKLQQCFLYCALYPEDFAIPKDELIDHWIAEGFIEEVKDVQAKYDRGHTILNRLVNCCLLESV-EDGGCV---KMHDLIRDMALR 522 L+ EE++ LF +I + + E+V++C LPL IV +A +S + EW + N L RL+ + V VF + S+ L+ E + CFLY +++PED+ I ++LI +AEGFI+ +++ + D + L++ LLE+V + G V ++HDL+RD+A++ Sbjct: 326 LTFEESWELFEQRAFRNIQRKDEDLLKTGKEMVQKCRGLPLCIVVLAGLLSRKTPS-EWNDVCNSLWRRLKDDSIHVAPIVF---DLSFKELRHES-KLCFLYLSIFPEDYEIDLEKLIHLLVAEGFIQGDEEMMME-DVARYYIEELIDRSLLEAVRRERGKVMSCRIHDLLRDVAIK 498
BLAST of CV887346 vs. ExPASy Swiss-Prot
Match: RP8L2_ARATH (Probable disease resistance RPP8-like protein 2 OS=Arabidopsis thaliana GN=RPP8L2 PE=1 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 7.546e-12 Identity = 46/152 (30.26%), Postives = 75/152 (49.34%), Query Frame = 1 Query: 91 EVVEECGCLPLAIVTVAASMSGEEEIYEWQ----NALNELRGRLRSLNDVDTKVFGRLEFSYHRLKDEKLQQCFLYCALYPEDFAIPKDELIDHWIAEGFIEEVKDVQAKYDRGHTILNRLV--NCCLLESVEDGGCV---KMHDLIRDMAL 519 E+V CG LPLA+ + ++ + + EW+ N + + G+ +D V+ L SY L + L+ CF Y A +PED+ I L ++W+AEG I D D G + L LV N ++E + +MHD++R++ L Sbjct: 350 EMVTYCGGLPLAVKVLGGLLAKKHTVLEWKRVHSNIVTHIVGKSGLSDDNSNSVYRVLSLSYEDLPMQ-LKHCFFYLAHFPEDYKIDVKILFNYWVAEGIITPFHDGSTIQDTGESYLEELVRRNMVVVEESYLTSRIEYCQMHDMMREVCL 500
BLAST of CV887346 vs. ExPASy Swiss-Prot
Match: ADR1_ARATH (Disease resistance protein ADR1 OS=Arabidopsis thaliana GN=ADR1 PE=2 SV=2) HSP 1 Score: 69.707 bits (169), Expect = 1.287e-11 Identity = 52/181 (28.73%), Postives = 83/181 (45.86%), Query Frame = 1 Query: 1 LSKEEAFNLFIDGVGSSILQVPTLNKEIINEVVEECGCLPLAIVTVAASMSGEEEIYEWQNALNELRGRLRSLNDVDTKVFGRLEFSYHRLKDEKLQQCFLYCALYPEDFAIPKDELIDHWIAEGFIEEVKDVQAKYDRGHTILNRLVNCCLLESVEDG---GCVKMHDLIRDMALRITSK 534 L K+EA +L NK ++ +VV+EC LPL++ + AS+ + E Y W+ + L + +++VF +E S L D K++ CFL +PED IP D L W+ I+E L +VN V G V HD++RD+AL ++++ Sbjct: 295 LKKDEAMSLLCLCAFEQKSPPSPFNKYLVKQVVDECKGLPLSLKVLGASLKNKPERY-WEGVVKRLLRGEAADETHESRVFAHMEESLENL-DPKIRDCFLDMGAFPEDKKIPLDLLTSVWVERHDIDEETAFSFVLRLADKNLLTIVNNPRFGDVHIGYYDVFVTQHDVLRDLALHMSNR 473
BLAST of CV887346 vs. ExPASy Swiss-Prot
Match: DRL30_ARATH (Probable disease resistance protein At5g04720 OS=Arabidopsis thaliana GN=At5g04720 PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 4.891e-11 Identity = 54/188 (28.72%), Postives = 92/188 (48.94%), Query Frame = 1 Query: 1 LSKEEAFNLFIDGVGSSILQVPTLNKEIINEVVEECGCLPLAIVTVAASMSGEEEIYEWQNALNELRGRLRSLNDVDTKVFGRLEFSYHRLKDEKLQQCFLYCALYPEDFAIPKDELIDHWIAEGFIEEVKDVQAKYDRGHTILNRLVNCCLLESVEDGG-----------CVKMHDLIRDMALRITS 531 L++ EA LF V + L ++ ++ +VV EC LPL++ + AS+ E Y W+ A+ L + +++VF ++E + L D K + CFL +PED IP D LI+ + + +++D A ++ L N LL V+D V HD++RD+ALR+++ Sbjct: 318 LNEHEATALFCLSVFNQKLVPSGFSQSLVKQVVGECKGLPLSLKVIGASLKERPEKY-WEGAVERLSRGEPADETHESRVFAQIEATLENL-DPKTRDCFLVLGAFPEDKKIPLDVLINVLVE---LHDLEDATA-----FAVIVDLANRNLLTLVKDPRFGHMYTSYYDIFVTQHDVLRDVALRLSN 495 The following BLAST results are available for this feature:
BLAST of CV887346 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 36
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CV887346 ID=CV887346; Name=CV887346; organism=Citrus sinensis; type=EST; length=605bpback to top |