CV887326

Overview
NameCV887326
Unique NameCV887326
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length789
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV887326 vs. ExPASy Swiss-Prot
Match: GDL61_ARATH (GDSL esterase/lipase At4g01130 OS=Arabidopsis thaliana GN=At4g01130 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 6.015e-11
Identity = 48/179 (26.82%), Postives = 75/179 (41.90%), Query Frame = -2
Query:  267 YVVYLISEYRKILARIYELGARRVLVTGTGPLGCVPAEL-------AQRGVNGECSVELQRAADLFNPQLVQMLNELNSQIGSDVFVAANAFAMHMDFIHDPQAYGFVTSKIACCGQG--PYN-----------GIGLCTIASNLCPNRDLYAFWDPFHPSEKANRIIVQRIASGSSKY 743
            Y+  +I +    +  IY +G R  LV    P+GC PA L       A     G C + + +A   +N  L + L++  +++ +   +  +   + +D    P++YG      ACCG G  PYN            IG  +  +  C +   Y  WD  H +E AN  I   I  GS  Y
Sbjct:  194 YLPQVIGQIAGTIKEIYGIGGRTFLVLNLAPVGCYPAILTGYTHTDADLDKYG-CLIPVNKAVKYYNTLLNKTLSQTRTELKNATVIYLDTHKILLDLFQHPKSYGMKHGIKACCGYGGRPYNFNQKLFCGNTKVIGNFSTTAKACHDPHNYVSWDGIHATEAANHHISMAILDGSISY 371          
BLAST of CV887326 vs. ExPASy Swiss-Prot
Match: GDL56_ARATH (GDSL esterase/lipase At3g43570 OS=Arabidopsis thaliana GN=At3g43570 PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 7.856e-11
Identity = 42/165 (25.45%), Postives = 71/165 (43.03%), Query Frame = -2
Query:  288 FSARSRQFSLPDYVVYLISEYRKILARIYELGARRVLVTGTGPLGCVPAELAQRGVNGECSVELQRAADLFNPQLVQMLNELNSQIGSDVFVAANAFAMHMDFIHDPQAYGFVTSKIACCGQGPYNGIGLCTIASNL-CPNRDLYAFWDPFHPSEKANRIIVQRI 779
            + A++ ++    Y  +L       +  +++LGA+++ V    P+GCVP    QR V G+  ++                          V +  N +    D I  P+ YGF  +   CCG+G      LC   +   C N   Y FWD +HPS++A ++IV  +
Sbjct:  175 YLAQAHRYDRTSYANFLADSAVHFVRELHKLGAQKIGVFSAVPVGCVPL---QRTVFGDKELD-------------------------GVILYINVYDTLFDMIQHPKKYGFEVADRGCCGKGLLTISYLCNSLNQFTCSNSSAYIFWDSYHPSKRAYQVIVDNL 311          
The following BLAST results are available for this feature:
BLAST of CV887326 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 72
Match NameE-valueIdentityDescription
GDL61_ARATH6.015e-1126.82GDSL esterase/lipase At4g01130 OS=Arabidopsis thal... [more]
GDL56_ARATH7.856e-1125.45GDSL esterase/lipase At3g43570 OS=Arabidopsis thal... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_030F05_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_030_T7_F05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV887326 ID=CV887326; Name=CV887326; organism=Citrus sinensis; type=EST; length=789bp
ATATCAATCAATTATTCATTAACAATCCGATCAACCATTAATGCTTGATC
GTACCGCATACAAATTCAAAACATAAAAACTATTAATAAATGTATCACCA
CGACACTTAAGACAGCTCCAATACAATTAAAATAAAGAAGAATAATTAAT
AACAACACTGCCATACACTTAAAGAGAATAATTATGAGAGACTTATCTCA
ATTAAGAATTAAAAATTAGACCCTTGAATCTAAAGCCATAATGGTGCTGA
GATTCATTGGGTTCATGTACTTGCTTGAGCCAGACGCAATTCGCTGAACG
ATGATTCTGTTGGCTTTCTCCGATGGATGGAACGGATCCCAAAACGCGTA
CAAATCCCTGTTGGGGCATAAGTTTGATGCAATTGTGCAGAGGCCTATGC
CATTGTAGGGTCCTTGTCCGCAACATGCTATTTTTGAGGTAACAAATCCG
TAAGCTTGAGGGTCATGGATGAAATCCATGTGCATTGCGAAGGCATTAGC
AGCAACAAAAACGTCAGATCCGATCTGACTATTGAGTTCATTTAACATTT
GAACGAGTTGTGGGTTGAACAAATCAGCTGCCCGTTGCAGTTCTACTGAA
CATTCACCATTTACGCCACGCTGTGCAAGCTCTGCTGGGACGCAACCCAA
TGGTCCTGTGCCCGTCACCAAAACCCTACGGGCGCCAAGTTCATATATCC
TCGCCAGAATTTTGCGATACTCTGAGATTAGATACACAACATAATCTGGA
AGAGAAAATTGGCGAGATCTTGCAGAAAACGGCACCAAG
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