CV887304
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV887304 vs. ExPASy Swiss-Prot
Match: PME10_ARATH (Putative pectinesterase 10 OS=Arabidopsis thaliana GN=PME10 PE=2 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.234e-16 Identity = 57/177 (32.20%), Postives = 78/177 (44.07%), Query Frame = -1 Query: 264 RQFYRECDIYGTVDFIFGNAAVVLQKCAIYARK---PMAMQKNTITAQNRKDPNQNTGISIHDCSLYAAPDFQASKGSIPTYLGRPWKLYSRVVYMLTYMGDHIQPRGWLEWNGDFALDTLYYGEYMNSGPGSAVGHRVRWPGYRVITSATEAS--KFTVSQFIYGSSWLPSTGVAF 779 R +Y+ C I G +DFIFG A + + C + R P TITAQ R P G DC++ GS LGR WK YSRV++ + D+I P GW W + + E+ +G G+ RV W +T A+E +FT FI WL + F Sbjct: 177 RHYYKRCVISGGIDFIFGGAQSIFEGCTLKLRVGIYPPNEVYGTITAQGRDSPTDKGGFVFKDCTVM---------GSGKALLGRAWKSYSRVIFYRSMFSDNILPIGWDAWKAKGQEGHITFVEFGCTGVGADTSKRVPW-----LTKASEKDVLQFTNLTFIDEEGWLSRLPIKF 339
BLAST of CV887304 vs. ExPASy Swiss-Prot
Match: PME31_ARATH (Pectinesterase 31 OS=Arabidopsis thaliana GN=PME31 PE=1 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.365e-15 Identity = 51/139 (36.69%), Postives = 71/139 (51.08%), Query Frame = -1 Query: 366 RQFYRECDIYGTVDFIFGNAAVVLQKCAIYARKPMAMQKNTITAQNRKDPNQNTGISIHDCSLYAAPDFQASKGSIPTYLGRPWKLYSRVVYMLTYMGDHIQPRGWLEW-NGDFALDTLYYGEYMNSGPGSAVGHRVRW 779 +Q+ ++C I G+VDFIFGN+ +L+ C I+ + + ITAQ+RK ++TG C + G + YLGRPW + RVV TYM I+ GW W N + +Y EY GPGS RV W Sbjct: 152 KQYLKDCYIEGSVDFIFGNSTALLEHCHIHCKS-----QGFITAQSRKSSQESTGYVFLRCVITG----NGQSGYM--YLGRPWGPFGRVVLAYTYMDACIRNVGWHNWGNAENERSACFY-EYRCFGPGSCSSERVPW 278
BLAST of CV887304 vs. ExPASy Swiss-Prot
Match: PME49_ARATH (Probable pectinesterase 49 OS=Arabidopsis thaliana GN=PME49 PE=2 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.782e-15 Identity = 53/163 (32.52%), Postives = 73/163 (44.79%), Query Frame = -1 Query: 285 FYRECDIYGTVDFIFGNAAVVLQKCAIYARKPMAMQKNTITAQNRKDPNQNTGISIHDCSLYAAPDFQASKGSIPTYLGRPWKLYSRVVYMLTYMGDHIQPRGWLEWNGDFALDTLYYGEYMNSGPGSAVGHRVRWPGYRVITSATEASKFTVSQFIYGSSWL 773 F++ C I GT DFIFG A + ++A + I A NR+ + G S C + YLGR W + +VVY T M + P GW E T++YGEYM +GPGS H+ + + EAS+F +I GS WL Sbjct: 207 FFKNCYIEGTYDFIFGRGASLYLTTQLHA---VGDGLRVIAAHNRQSTTEQNGYSFVHCKVTGV--------GTGIYLGRAWMSHPKVVYSYTEMSSVVNPSGWQENRVRAHDKTVFYGEYMCTGPGS---HKAKRVAHTQDIDNKEASQFLTLGYIKGSKWL 355
BLAST of CV887304 vs. ExPASy Swiss-Prot
Match: PME29_ARATH (Probable pectinesterase 29 OS=Arabidopsis thaliana GN=PME29 PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.971e-15 Identity = 46/140 (32.86%), Postives = 66/140 (47.14%), Query Frame = -1 Query: 366 RQFYRECDIYGTVDFIFGNAAVVLQKCAIYARKPMAMQ--KNTITAQNRKDPNQNTGISIHDCSLYAAPDFQASKGSIPTYLGRPWKLYSRVVYMLTYMGDHIQPRGWLEWNGDFALDTLYYGEYMNSGPGSAVGHRVRW 779 R ++ C I G VDFIFG + Q C I ITAQ R +P G +C +Y G+ +LGRPW+ YSRV++ + + D + P GW WN + L + E+ G G+ +G RV+W Sbjct: 174 RHYFHRCTIQGAVDFIFGTGQSIYQSCVIQVLGGQLEPGLAGYITAQGRTNPYDANGFIFINCLVY---------GTGMAFLGRPWRGYSRVIFYNSNLTDVVVPEGWDAWNFVGHENQLVFAEHGCFGSGANIGRRVKW 304
BLAST of CV887304 vs. ExPASy Swiss-Prot
Match: PME68_ARATH (Probable pectinesterase 68 OS=Arabidopsis thaliana GN=PME68 PE=2 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 5.186e-15 Identity = 49/166 (29.52%), Postives = 76/166 (45.78%), Query Frame = -1 Query: 285 RQFYRECDIYGTVDFIFGNAAVVLQKCAIYARKPMAMQKNTITAQNRKDPNQNTGISIHDCSLYAAPDFQASKGSIPTYLGRPWKLYSRVVYMLTYMGDHIQPRGWLEW-NGDFALDTLYYGEYMNSGPGSAVGHRVRWPGYRVITSATEASKFTVSQFIYGSSWL 779 R +++EC I G++DFIFGN + + C +++ +A + +I A R P + TG + C + G+ P Y+GR YSR+VY TY + GW +W + T ++G Y GPG+A V W A F F+ G W+ Sbjct: 207 RHYFKECYIEGSIDFIFGNGRSMYKDCELHS---IASRFGSIAAHGRTCPEEKTGFAFVGCRV---------TGTGPLYVGRAMGQYSRIVYAYTYFDALVAHGGWDDWDHKSNKSKTAFFGVYNCYGPGAAATRGVSWAR---ALDYESAHPFIAKSFVNGRHWI 357
BLAST of CV887304 vs. ExPASy Swiss-Prot
Match: PME50_ARATH (Probable pectinesterase 50 OS=Arabidopsis thaliana GN=PME50 PE=2 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 4.390e-14 Identity = 52/163 (31.90%), Postives = 72/163 (44.17%), Query Frame = -1 Query: 285 FYRECDIYGTVDFIFGNAAVVLQKCAIYARKPMAMQKNTITAQNRKDPNQNTGISIHDCSLYAAPDFQASKGSIPTYLGRPWKLYSRVVYMLTYMGDHIQPRGWLEWNGDFALDTLYYGEYMNSGPGSAVGHRVRWPGYRVITSATEASKFTVSQFIYGSSWL 773 F+++C I GT DFIFG A + ++A + ITAQ R+ + G + C + YLGR W + +VVY T M + P GW E T++YGEY GPGS + RV Y E + F +I GS+WL Sbjct: 207 FFKDCYIEGTYDFIFGRGASLYLNTQLHA---VGDGLRVITAQGRQSATEQNGYTFVHCKVTGT--------GTGIYLGRSWMSHPKVVYAFTEMTSVVNPSGWRENLNRGYDKTVFYGEYKCFGPGSHLEKRV---PYTQDIDKNEVTPFLTLGYIKGSTWL 355
BLAST of CV887304 vs. ExPASy Swiss-Prot
Match: PME55_ARATH (Probable pectinesterase 55 OS=Arabidopsis thaliana GN=PME55 PE=2 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 7.488e-14 Identity = 46/140 (32.86%), Postives = 62/140 (44.29%), Query Frame = -1 Query: 366 RQFYRECDIYGTVDFIFGNAAVVLQKCAIYARKPMAMQKNT--ITAQNRKDPNQNTGISIHDCSLYAAPDFQASKGSIPTYLGRPWKLYSRVVYMLTYMGDHIQPRGWLEWNGDFALDTLYYGEYMNSGPGSAVGHRVRW 779 R ++ C I G VDFI G+ + Q C I T ITAQ R + N G +C ++ G YLGR W+ YSRV++ + + D + P GW EWN L Y E+ G GS R +W Sbjct: 169 RHYFHRCTIQGAVDFILGSGQSIYQSCVIQVLGGQLGPGVTGYITAQGRTNANDANGFVFINCLVH---------GFGKAYLGRAWRPYSRVIFYNSNLTDVVDPLGWWEWNYQGYEKQLTYAEHGCFGSGSNTSRRAKW 299
BLAST of CV887304 vs. ExPASy Swiss-Prot
Match: PPME1_ARATH (Pectinesterase PPME1 OS=Arabidopsis thaliana GN=PPME1 PE=1 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 6.339e-13 Identity = 50/163 (30.67%), Postives = 74/163 (45.40%), Query Frame = -1 Query: 285 FYRECDIYGTVDFIFGNAAVVLQKCAIYARKPMAMQKNTITAQNRKDPNQNTGISIHDCSLYAAPDFQASKGSIPTYLGRPWKLYSRVVYMLTYMGDHIQPRGWLEWNGDFALDTLYYGEYMNSGPGSAVGHRVRWPGYRVITSATEASKFTVSQFIYGSSWL 773 F+++C + GT DFIFG+ + ++ + I A K + +G S C + + G I YLGR W + +VVY T M + P GW E T++YGEY SGPGS H+ + + EA++F +I GS WL Sbjct: 207 FFKDCYVEGTFDFIFGSGTSMYLGTQLHV---VGDGIRVIAAHAGKSAEEKSGYSFVHCKV------TGTGGGI--YLGRAWMSHPKVVYAYTEMTSVVNPTGWQENKTPAHDKTVFYGEYKCSGPGS---HKAKRVPFTQDIDDKEANRFLSLGYIQGSKWL 355
BLAST of CV887304 vs. ExPASy Swiss-Prot
Match: PME48_ARATH (Probable pectinesterase 48 OS=Arabidopsis thaliana GN=PME48 PE=2 SV=2) HSP 1 Score: 72.7886 bits (177), Expect = 2.409e-12 Identity = 50/163 (30.67%), Postives = 73/163 (44.79%), Query Frame = -1 Query: 285 FYRECDIYGTVDFIFGNAAVVLQKCAIYARKPMAMQKNTITAQNRKDPNQNTGISIHDCSLYAAPDFQASKGSIPTYLGRPWKLYSRVVYMLTYMGDHIQPRGWLEWNGDFALDTLYYGEYMNSGPGSAVGHRVRWPGYRVITSATEASKFTVSQFIYGSSWL 773 F+++C + GT DFIFG+ + ++ + I A K + +G S C + + G I YLGR W + +VVY T M + P GW E T++YGEY SGPGS H+ + + EA+ F +I GS WL Sbjct: 207 FFKDCYVEGTFDFIFGSGTSMYLGTQLHV---VGDGIRVIAAHAGKSAEEKSGYSFVHCKV------TGTGGGI--YLGRAWMSHPKVVYAYTEMTSVVNPTGWQENKTPAHDKTVFYGEYKCSGPGS---HKAKRVPFTQDIDDKEANCFLSLGYIQGSKWL 355
BLAST of CV887304 vs. ExPASy Swiss-Prot
Match: PME52_ARATH (Putative pectinesterase 52 OS=Arabidopsis thaliana GN=PME52 PE=2 SV=2) HSP 1 Score: 72.0182 bits (175), Expect = 4.109e-12 Identity = 49/168 (29.17%), Postives = 73/168 (43.45%), Query Frame = -1 Query: 285 RQFYRECDIYGTVDFIFGNAAVVLQKCAIYARKPMAMQKNT---ITAQNRKDPNQNTGISIHDCSLYAAPDFQASKGSIPTYLGRPWKLYSRVVYMLTYMGDHIQPRGWLEWNGDFALDTLYYGEYMNSGPGSAVGHRVRWPGYRVITSATEASKFTVSQFIYGSSWL 779 R ++ C I G +DFIFG+ V + C I A K + ITAQ R + +G S+ GS YLGR + +SRV+++ T + + P GW W+ + Y E G GS + RV W + S +F++S FI W+ Sbjct: 131 RHHFKNCYIEGAIDFIFGSGQSVYEDCHINATAGALASKVSFGYITAQGRSSDSDPSGFVFLRGSV---------SGSTSVYLGRAYGPFSRVIFIQTDLSSVVHPEGWYSWHYGGYEMSFTYAEVECKGAGSDMSRRVPW--IDKLHSFYTKQQFSISNFIDQDQWI 287 The following BLAST results are available for this feature:
BLAST of CV887304 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 82
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Sequences
The
following sequences are available for this feature:
EST sequence >CV887304 ID=CV887304; Name=CV887304; organism=Citrus sinensis; type=EST; length=782bpback to top |