CV887302
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV887302 vs. ExPASy Swiss-Prot
Match: ARF2_ORYSJ (ADP-ribosylation factor 2 OS=Oryza sativa subsp. japonica GN=ARF PE=2 SV=2) HSP 1 Score: 121.324 bits (303), Expect = 6.191e-27 Identity = 60/178 (33.71%), Postives = 101/178 (56.74%), Query Frame = 2 Query: 140 FYGLWKYIFTKTEFHVLILGIDKAGKTTLLEKLK--SVYSNVEGLPPDRIVPTVGLNIGRIEVSNSKLVFWDLGGQPGLRSIWEKYYEEAHAVVFVIDAACPSRFEDSKTALEKVLRNEDLQGAPLLILANKQDLPDAVSADELARYLDLKKLDERVCMFEAVSGYDGFGIKESVEWL 667 F L+ +F K E +L++G+D AGKTT+L KLK + + + PT+G N+ +E N WD+GGQ +R +W Y++ ++FV+D+ R +++ L ++L ++L+ A LL+ ANKQDLP+A++A E+ L L L +R ++ G G+ E ++WL Sbjct: 5 FTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTI---------PTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWL 173
BLAST of CV887302 vs. ExPASy Swiss-Prot
Match: ARF2_ARATH (ADP-ribosylation factor 2 OS=Arabidopsis thaliana GN=ARF2-A PE=2 SV=3) HSP 1 Score: 121.324 bits (303), Expect = 6.191e-27 Identity = 60/178 (33.71%), Postives = 101/178 (56.74%), Query Frame = 2 Query: 140 FYGLWKYIFTKTEFHVLILGIDKAGKTTLLEKLK--SVYSNVEGLPPDRIVPTVGLNIGRIEVSNSKLVFWDLGGQPGLRSIWEKYYEEAHAVVFVIDAACPSRFEDSKTALEKVLRNEDLQGAPLLILANKQDLPDAVSADELARYLDLKKLDERVCMFEAVSGYDGFGIKESVEWL 667 F L+ +F K E +L++G+D AGKTT+L KLK + + + PT+G N+ +E N WD+GGQ +R +W Y++ ++FV+D+ R +++ L ++L ++L+ A LL+ ANKQDLP+A++A E+ L L L +R ++ G G+ E ++WL Sbjct: 5 FAKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTI---------PTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWL 173
BLAST of CV887302 vs. ExPASy Swiss-Prot
Match: ARF1_ORYSJ (ADP-ribosylation factor 1 OS=Oryza sativa subsp. japonica GN=Os01g0813400 PE=2 SV=3) HSP 1 Score: 121.324 bits (303), Expect = 6.191e-27 Identity = 60/178 (33.71%), Postives = 101/178 (56.74%), Query Frame = 2 Query: 140 FYGLWKYIFTKTEFHVLILGIDKAGKTTLLEKLK--SVYSNVEGLPPDRIVPTVGLNIGRIEVSNSKLVFWDLGGQPGLRSIWEKYYEEAHAVVFVIDAACPSRFEDSKTALEKVLRNEDLQGAPLLILANKQDLPDAVSADELARYLDLKKLDERVCMFEAVSGYDGFGIKESVEWL 667 F L+ +F K E +L++G+D AGKTT+L KLK + + + PT+G N+ +E N WD+GGQ +R +W Y++ ++FV+D+ R +++ L ++L ++L+ A LL+ ANKQDLP+A++A E+ L L L +R ++ G G+ E ++WL Sbjct: 5 FTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTI---------PTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWL 173
BLAST of CV887302 vs. ExPASy Swiss-Prot
Match: ARF5_CHICK (ADP-ribosylation factor 5 OS=Gallus gallus GN=ARF5 PE=2 SV=2) HSP 1 Score: 120.939 bits (302), Expect = 8.086e-27 Identity = 63/184 (34.24%), Postives = 104/184 (56.52%), Query Frame = 2 Query: 149 LWKYIFTKTEFHVLILGIDKAGKTTLLEKLK--SVYSNVEGLPPDRIVPTVGLNIGRIEVSNSKLVFWDLGGQPGLRSIWEKYYEEAHAVVFVIDAACPSRFEDSKTALEKVLRNEDLQGAPLLILANKQDLPDAVSADELARYLDLKKLDERVCMFEAVSGYDGFGIKESVEWLVEVMERSKR 694 ++ IF K + +L++G+D AGKTT+L KLK + + + PT+G N+ +E N WD+GGQ +R +W Y++ ++FV+D+ R ++S L+K+L+ ++L+ A LL+ ANKQD+P+A+ EL L L+ L R +A G G+ + ++WL E SKR Sbjct: 8 IFSRIFGKKQMRILMVGLDAAGKTTILYKLKLGEIVTTI---------PTIGFNVETVEYKNICFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVQESAEELQKMLQEDELRDAVLLVFANKQDMPNAMVVSELTDKLGLQALRSRTWYVQATCATQGTGLYDGLDWLSH--ELSKR 180
BLAST of CV887302 vs. ExPASy Swiss-Prot
Match: ARF3_DROME (ADP-ribosylation factor 3 OS=Drosophila melanogaster GN=Arf51F PE=2 SV=3) HSP 1 Score: 120.939 bits (302), Expect = 8.086e-27 Identity = 61/169 (36.09%), Postives = 94/169 (55.62%), Query Frame = 2 Query: 161 IFTKTEFHVLILGIDKAGKTTLLEKLKSVYSNVEGLPPDRIVPTVGLNIGRIEVSNSKLVFWDLGGQPGLRSIWEKYYEEAHAVVFVIDAACPSRFEDSKTALEKVLRNEDLQGAPLLILANKQDLPDAVSADELARYLDLKKLDERVCMFEAVSGYDGFGIKESVEWL 667 IF E +L+LG+D AGKTT+L KLK S +PTVG N+ + N K WD+GGQ +R +W YY ++FV+D A R ++++T L +++ + +++ A +LI ANKQDLPDA+ E+ L L ++ +R + G G+ E + WL Sbjct: 8 IFGNKEMRILMLGLDAAGKTTILYKLKLGQSVTT-------IPTVGFNVETVTYKNVKFNVWDVGGQDKIRPLWRHYYTGTQGLIFVVDCADRDRIDEARTELHRIINDREMRDAIILIFANKQDLPDAMKPHEIQEKLGLTRIRDRNWYVQPSCATSGDGLSEGLIWL 169
BLAST of CV887302 vs. ExPASy Swiss-Prot
Match: ARF1_SOLTU (ADP-ribosylation factor 1 OS=Solanum tuberosum PE=2 SV=2) HSP 1 Score: 120.939 bits (302), Expect = 8.086e-27 Identity = 60/183 (32.79%), Postives = 102/183 (55.74%), Query Frame = 2 Query: 149 LWKYIFTKTEFHVLILGIDKAGKTTLLEKLK--SVYSNVEGLPPDRIVPTVGLNIGRIEVSNSKLVFWDLGGQPGLRSIWEKYYEEAHAVVFVIDAACPSRFEDSKTALEKVLRNEDLQGAPLLILANKQDLPDAVSADELARYLDLKKLDERVCMFEAVSGYDGFGIKESVEWLVEVMERSK 691 L+ +F K E +L++G+D AGKTT+L KLK + + + PT+G N+ +E N WD+GGQ +R +W Y++ ++FV+D+ R +++ L ++L ++L+ A LL+ ANKQDLP+A++A E+ L L L +R ++ G G+ E ++WL + K Sbjct: 8 LFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTI---------PTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVNEAREELMRMLAEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNQIRNQK 181
BLAST of CV887302 vs. ExPASy Swiss-Prot
Match: ARF1_DAUCA (ADP-ribosylation factor 1 OS=Daucus carota GN=ARF1 PE=2 SV=2) HSP 1 Score: 120.939 bits (302), Expect = 8.086e-27 Identity = 60/178 (33.71%), Postives = 101/178 (56.74%), Query Frame = 2 Query: 140 FYGLWKYIFTKTEFHVLILGIDKAGKTTLLEKLK--SVYSNVEGLPPDRIVPTVGLNIGRIEVSNSKLVFWDLGGQPGLRSIWEKYYEEAHAVVFVIDAACPSRFEDSKTALEKVLRNEDLQGAPLLILANKQDLPDAVSADELARYLDLKKLDERVCMFEAVSGYDGFGIKESVEWL 667 F L+ +F K E +L++G+D AGKTT+L KLK + + + PT+G N+ +E N WD+GGQ +R +W Y++ ++FV+D+ R +++ L ++L ++L+ A LL+ ANKQDLP+A++A E+ L L L +R ++ G G+ E ++WL Sbjct: 5 FTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTI---------PTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEIIDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWL 173
BLAST of CV887302 vs. ExPASy Swiss-Prot
Match: ARF1_ARATH (ADP-ribosylation factor 1 OS=Arabidopsis thaliana GN=ARF1 PE=1 SV=2) HSP 1 Score: 120.939 bits (302), Expect = 8.086e-27 Identity = 60/178 (33.71%), Postives = 101/178 (56.74%), Query Frame = 2 Query: 140 FYGLWKYIFTKTEFHVLILGIDKAGKTTLLEKLK--SVYSNVEGLPPDRIVPTVGLNIGRIEVSNSKLVFWDLGGQPGLRSIWEKYYEEAHAVVFVIDAACPSRFEDSKTALEKVLRNEDLQGAPLLILANKQDLPDAVSADELARYLDLKKLDERVCMFEAVSGYDGFGIKESVEWL 667 F L+ +F K E +L++G+D AGKTT+L KLK + + + PT+G N+ +E N WD+GGQ +R +W Y++ ++FV+D+ R +++ L ++L ++L+ A LL+ ANKQDLP+A++A E+ L L L +R ++ G G+ E ++WL Sbjct: 5 FGKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTI---------PTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWL 173
BLAST of CV887302 vs. ExPASy Swiss-Prot
Match: ARL3_RAT (ADP-ribosylation factor-like protein 3 OS=Rattus norvegicus GN=Arl3 PE=1 SV=2) HSP 1 Score: 120.168 bits (300), Expect = 1.379e-26 Identity = 64/173 (36.99%), Postives = 99/173 (57.23%), Query Frame = 2 Query: 176 EFHVLILGIDKAGKTTLLEKLKSVYSNVEGLPPDRIVPTVGLNIGRIEVSNSKLVFWDLGGQPGLRSIWEKYYEEAHAVVFVIDAACPSRFEDSKTALEKVLRNEDLQGAPLLILANKQDLPDAVSADELARYLDLKKLDERVCMFEAVSGYDGFGIKESVEWLVEVMERSKR 694 E +L+LG+D AGKTTLL++L S E + I PT G NI ++ KL WD+GGQ +R W Y+E +++VID+A RFE++ L ++L E L P+L+ ANKQDL A A E+A L+L + +RV ++ S G G+++ + W+ + + K+ Sbjct: 17 EVRILLLGLDNAGKTTLLKQLAS-----EDI--SHITPTQGFNIKSVQSQGFKLNVWDIGGQRKIRPYWRSYFENTDILIYVIDSADRKRFEETGQELTELLEEEKLSCVPVLVFANKQDLLTAAPAAEIAEGLNLHTIRDRVWQIQSCSALTGEGVQDGMNWVCKNVNAKKK 182
BLAST of CV887302 vs. ExPASy Swiss-Prot
Match: ARL2_HUMAN (ADP-ribosylation factor-like protein 2 OS=Homo sapiens GN=ARL2 PE=1 SV=4) HSP 1 Score: 119.783 bits (299), Expect = 1.801e-26 Identity = 63/166 (37.95%), Postives = 93/166 (56.02%), Query Frame = 2 Query: 176 EFHVLILGIDKAGKTTLLEKLKSVYSNVEGLPPDRIVPTVGLNIGRIEVSNSKLVFWDLGGQPGLRSIWEKYYEEAHAVVFVIDAACPSRFEDSKTALEKVLRNEDLQGAPLLILANKQDLPDAVSADELARYLDLKKLDERVCMFEAVSGYDGFGIKESVEWLVE 673 E +L+LG+D AGKTT+L+K G D I PT+G NI +E KL WD+GGQ LRS W Y+E +++V+D+A R +D + L+ +L E L GA LLI ANKQDLP A+S++ + L+L + + S G + ++WL++ Sbjct: 16 ELRLLMLGLDNAGKTTILKKFN-------GEDIDTISPTLGFNIKTLEHRGFKLNIWDVGGQKSLRSYWRNYFESTDGLIWVVDSADRQRMQDCQRELQSLLVEERLAGATLLIFANKQDLPGALSSNAIREVLELDSIRSHHWCIQGCSAVTGENLLPGIDWLLD 174 The following BLAST results are available for this feature:
BLAST of CV887302 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 219
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Sequences
The
following sequences are available for this feature:
EST sequence >CV887302 ID=CV887302; Name=CV887302; organism=Citrus sinensis; type=EST; length=803bpback to top |