CV887275
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV887275 vs. ExPASy Swiss-Prot
Match: PSMA_SULIY (Proteasome subunit alpha OS=Sulfolobus islandicus (strain Y.G.57.14 / Yellowstone #1) GN=psmA PE=3 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 2.242e-28 Identity = 67/166 (40.36%), Postives = 105/166 (63.25%), Query Frame = -3 Query: 267 DSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNYKE-TSGQETIKLAIRALLEVVESGGK----NIEVAVMTREKGL 749 D S+ K+ +D+H+ + AGL +D RVLI+ AR HRL ++PV+++Y+T+ +A ++Q YTQ GGVRPFG++ +I G D VP LY T+PSG + ++A A G+ + EFLEKNYKE + ++TI LA++AL ++ K +E+ + + GL Sbjct: 62 DVDSIEKVFLIDDHVGCSFAGLASDGRVLIDYARNIALQHRLIYDEPVSIDYLTKSVADVKQMYTQHGGVRPFGVALVIAGID--KSVPKLYMTEPSGQYMPYQAVAIGQGYYTATEFLEKNYKEDLTIEDTILLALKALSATLKPNEKLTPNTVEIGYASTQTGL 225
BLAST of CV887275 vs. ExPASy Swiss-Prot
Match: PSMA_SULIN (Proteasome subunit alpha OS=Sulfolobus islandicus (strain Y.N.15.51 / Yellowstone #2) GN=psmA PE=3 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 2.242e-28 Identity = 67/166 (40.36%), Postives = 105/166 (63.25%), Query Frame = -3 Query: 267 DSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNYKE-TSGQETIKLAIRALLEVVESGGK----NIEVAVMTREKGL 749 D S+ K+ +D+H+ + AGL +D RVLI+ AR HRL ++PV+++Y+T+ +A ++Q YTQ GGVRPFG++ +I G D VP LY T+PSG + ++A A G+ + EFLEKNYKE + ++TI LA++AL ++ K +E+ + + GL Sbjct: 62 DVDSIEKVFLIDDHVGCSFAGLASDGRVLIDYARNIALQHRLIYDEPVSIDYLTKSVADVKQMYTQHGGVRPFGVALVIAGID--KSVPKLYMTEPSGQYMPYQAVAIGQGYYTATEFLEKNYKEDLTIEDTILLALKALSATLKPNEKLTPNTVEIGYASTQTGL 225
BLAST of CV887275 vs. ExPASy Swiss-Prot
Match: PSMA_SULIM (Proteasome subunit alpha OS=Sulfolobus islandicus (strain M.14.25 / Kamchatka #1) GN=psmA PE=3 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 2.242e-28 Identity = 67/166 (40.36%), Postives = 105/166 (63.25%), Query Frame = -3 Query: 267 DSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNYKE-TSGQETIKLAIRALLEVVESGGK----NIEVAVMTREKGL 749 D S+ K+ +D+H+ + AGL +D RVLI+ AR HRL ++PV+++Y+T+ +A ++Q YTQ GGVRPFG++ +I G D VP LY T+PSG + ++A A G+ + EFLEKNYKE + ++TI LA++AL ++ K +E+ + + GL Sbjct: 62 DVDSIEKVFLIDDHVGCSFAGLASDGRVLIDYARNIALQHRLIYDEPVSIDYLTKSVADVKQMYTQHGGVRPFGVALVIAGID--KSVPKLYMTEPSGQYMPYQAVAIGQGYYTATEFLEKNYKEDLTIEDTILLALKALSATLKPNEKLTPNTVEIGYASTQTGL 225
BLAST of CV887275 vs. ExPASy Swiss-Prot
Match: PSMA_SULIL (Proteasome subunit alpha OS=Sulfolobus islandicus (strain L.S.2.15 / Lassen #1) GN=psmA PE=3 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 2.242e-28 Identity = 67/166 (40.36%), Postives = 105/166 (63.25%), Query Frame = -3 Query: 267 DSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNYKE-TSGQETIKLAIRALLEVVESGGK----NIEVAVMTREKGL 749 D S+ K+ +D+H+ + AGL +D RVLI+ AR HRL ++PV+++Y+T+ +A ++Q YTQ GGVRPFG++ +I G D VP LY T+PSG + ++A A G+ + EFLEKNYKE + ++TI LA++AL ++ K +E+ + + GL Sbjct: 62 DVDSIEKVFLIDDHVGCSFAGLASDGRVLIDYARNIALQHRLIYDEPVSIDYLTKSVADVKQMYTQHGGVRPFGVALVIAGID--KSVPKLYMTEPSGQYMPYQAVAIGQGYYTATEFLEKNYKEDLTIEDTILLALKALSATLKPNEKLTPNTVEIGYASTQTGL 225
BLAST of CV887275 vs. ExPASy Swiss-Prot
Match: PSMA_SULIK (Proteasome subunit alpha OS=Sulfolobus islandicus (strain M.16.4 / Kamchatka #3) GN=psmA PE=3 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 2.242e-28 Identity = 67/166 (40.36%), Postives = 105/166 (63.25%), Query Frame = -3 Query: 267 DSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNYKE-TSGQETIKLAIRALLEVVESGGK----NIEVAVMTREKGL 749 D S+ K+ +D+H+ + AGL +D RVLI+ AR HRL ++PV+++Y+T+ +A ++Q YTQ GGVRPFG++ +I G D VP LY T+PSG + ++A A G+ + EFLEKNYKE + ++TI LA++AL ++ K +E+ + + GL Sbjct: 62 DVDSIEKVFLIDDHVGCSFAGLASDGRVLIDYARNIALQHRLIYDEPVSIDYLTKSVADVKQMYTQHGGVRPFGVALVIAGID--KSVPKLYMTEPSGQYMPYQAVAIGQGYYTATEFLEKNYKEDLTIEDTILLALKALSATLKPNEKLTPNTVEIGYASTQTGL 225
BLAST of CV887275 vs. ExPASy Swiss-Prot
Match: PSMA_SULIA (Proteasome subunit alpha OS=Sulfolobus islandicus (strain M.16.27) GN=psmA PE=3 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 2.242e-28 Identity = 67/166 (40.36%), Postives = 105/166 (63.25%), Query Frame = -3 Query: 267 DSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNYKE-TSGQETIKLAIRALLEVVESGGK----NIEVAVMTREKGL 749 D S+ K+ +D+H+ + AGL +D RVLI+ AR HRL ++PV+++Y+T+ +A ++Q YTQ GGVRPFG++ +I G D VP LY T+PSG + ++A A G+ + EFLEKNYKE + ++TI LA++AL ++ K +E+ + + GL Sbjct: 62 DVDSIEKVFLIDDHVGCSFAGLASDGRVLIDYARNIALQHRLIYDEPVSIDYLTKSVADVKQMYTQHGGVRPFGVALVIAGID--KSVPKLYMTEPSGQYMPYQAVAIGQGYYTATEFLEKNYKEDLTIEDTILLALKALSATLKPNEKLTPNTVEIGYASTQTGL 225
BLAST of CV887275 vs. ExPASy Swiss-Prot
Match: PSMA_PYRKO (Proteasome subunit alpha OS=Pyrococcus kodakaraensis GN=psmA PE=3 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 3.824e-28 Identity = 73/173 (42.20%), Postives = 108/173 (62.43%), Query Frame = -3 Query: 231 SVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNYKETSGQ-ETIKLAIRALLEVVES-GGKNIEVAVMTR-EKGLKQLDEAEIDAMV 740 S KI +D+HIA A +G+ ADARVL++RAR+E Q +RLT +PV + + + I L+Q +TQ GGVRPFG + L+ G + P L++TDPSG + WKA A G N+ E++Y++ G+ + IKLAI AL + +E + IEVA +T EK K+L E++ + Sbjct: 65 SYEKIFLIDDHIAAAPSGIIADARVLVDRARLEAQIYRLTYGEPVPLTVLVKKICDLKQAHTQYGGVRPFGAALLMAGVNE---KPELFETDPSGAYFEWKAVAIGSGRNTAMAIFEEHYRDDIGKDDAIKLAILALAKTLEEPTAEGIEVAYITMDEKRWKKLPREELEKYI 234
BLAST of CV887275 vs. ExPASy Swiss-Prot
Match: PSMA_METJA (Proteasome subunit alpha OS=Methanocaldococcus jannaschii GN=psmA PE=1 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 3.824e-28 Identity = 71/174 (40.80%), Postives = 109/174 (62.64%), Query Frame = -3 Query: 231 RSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNYK-ETSGQETIKLAIRALLEVVES-GGKNIEVAVMT-REKGLKQLDEAEIDAMV 743 RS+ KI +D+H+A A +GL ADARVLI+RAR+E Q +RLT + +++E + + I ++Q YTQ GGVRPFG+S LI G D L++TDPSG +KA A G + E LEK Y+ + + E ++LAI AL + E +N++V ++T ++ K++ EI ++ Sbjct: 63 RSIEKIFQIDDHVAAATSGLVADARVLIDRARLEAQIYRLTYGEEISIEMLAKKICDIKQAYTQHGGVRPFGVSLLIAGID--KNEARLFETDPSGALIEYKATAIGSGRPVVMELLEKEYRDDITLDEGLELAITALTKANEDIKPENVDVCIITVKDAQFKKIPVEEIKKLI 234
BLAST of CV887275 vs. ExPASy Swiss-Prot
Match: PSMA_THEON (Proteasome subunit alpha OS=Thermococcus onnurineus (strain NA1) GN=psmA PE=3 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 4.994e-28 Identity = 72/169 (42.60%), Postives = 106/169 (62.72%), Query Frame = -3 Query: 243 SVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNYKETSGQE-TIKLAIRALLEVVES-GGKNIEVAVMT-REKGLKQLDEAEI 740 S KI +D+HIA A +G+ ADARVL++RAR+E Q +RLT +PV + + + I L+Q +TQ GGVRPFG + L+ G + P LY+TDPSG + W+A A G N+ E +Y + E IKLAI AL + +E ++IEVA +T ++K K++D+ E+ Sbjct: 65 SYEKIFQIDDHIAAAPSGIIADARVLVDRARLEAQVYRLTYGEPVPLTVLVKKICDLKQAHTQYGGVRPFGAALLMAGVN---DKPELYETDPSGAYFEWRAVAIGSGRNTAMAIFEDHYSDDLDMEGAIKLAILALAKTLEEPSPESIEVAYITMKDKRWKKMDKEEV 230
BLAST of CV887275 vs. ExPASy Swiss-Prot
Match: PSMA_THEK1 (Proteasome subunit alpha OS=Thermococcus sp. (strain KS-1) GN=psmA PE=3 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 4.994e-28 Identity = 73/170 (42.94%), Postives = 107/170 (62.94%), Query Frame = -3 Query: 240 SVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNYKETSGQ-ETIKLAIRALLEVVES-GGKNIEVAVMTR-EKGLKQLDEAEID 740 S KI +D+HIA A +G+ ADARVL++RAR+E Q +RLT +PV + + + I L+Q +TQ GGVRPFG + L+ G + P L++TDPSG + WKA A G N+ E++Y++ G+ + IKLAI AL + +E + IEVA +T EK K+L E++ Sbjct: 65 SYEKIFLIDDHIAAAPSGIIADARVLVDRARLEAQIYRLTYGEPVPLTVLVKKICDLKQAHTQYGGVRPFGAALLMAGVNE---KPELFETDPSGAYFEWKAVAIGSGRNTAMAIFEEHYRDDIGKDDAIKLAILALAKTLEEPTAEGIEVAYITMDEKRWKKLPREELE 231 The following BLAST results are available for this feature:
BLAST of CV887275 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 166
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Sequences
The
following sequences are available for this feature:
EST sequence >CV887275 ID=CV887275; Name=CV887275; organism=Citrus sinensis; type=EST; length=751bpback to top |