CV887275
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV887275 vs. ExPASy Swiss-Prot
Match: PSA2_DICDI (Proteasome subunit alpha type-2 OS=Dictyostelium discoideum GN=psmA2 PE=3 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 4.674e-26 Identity = 70/175 (40.00%), Postives = 104/175 (59.43%), Query Frame = -3 Query: 243 DSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNYKETSGQETIKLAIRALLEVVESGGK------NIEVAVMTREKGLKQLDEAEI 749 D SV+KI + +I L AG+ D+RVLI +AR E + + ++ + V + R +A + Q++TQSGGVRPFG+S L+ GFD P LYQ DPSG++ AWKA A G+N S + FLEK Y S I+ AI+ L ++ G + N+E+A++ + + K L A+I Sbjct: 56 DVTSVQKISMITENIGLVYAGMGPDSRVLIKKARKESEKYYKQYKEKIPVLQLVRELASIMQEFTQSGGVRPFGVSLLVAGFDEKG--PHLYQVDPSGSYFAWKATAIGKNMVSSKTFLEKRY---SDDLEIEDAIQTALITIKEGFETQLTEFNMELAIIGKNQEFKILTPAQI 225
BLAST of CV887275 vs. ExPASy Swiss-Prot
Match: PSMA_METMP (Proteasome subunit alpha OS=Methanococcus maripaludis GN=psmA PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 6.105e-26 Identity = 71/176 (40.34%), Postives = 107/176 (60.80%), Query Frame = -3 Query: 231 DSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNYKET-SGQETIKLAIRALLEVVES-GGKNIEVAVMTRE-KGLKQLDEAEIDAMV 749 D S+ KI +D+HI A +GL ADARVLI+RARIE Q +R++ + +TVE + + I ++Q YTQ GG RPFGL+ LI G D ++ L++TDPSG +KA A G E LE Y E + E ++LA+ AL + E +NI++A++ K ++++ EI+ +V Sbjct: 62 DVSSIEKIFQIDDHIVAATSGLVADARVLIDRARIEAQMNRVSYGEAITVEALAKKICDIKQAYTQHGGARPFGLALLITGIDRHSA--RLFETDPSGALIEYKATAIGSGRPIAMEVLESKYDENMTVSEGMELALYALSKTTEELKPENIDMAIIKDSGKLVEKISVDEIEKIV 235
BLAST of CV887275 vs. ExPASy Swiss-Prot
Match: PSA4_CAEEL (Proteasome subunit alpha type-4 OS=Caenorhabditis elegans GN=pas-3 PE=2 SV=2) HSP 1 Score: 117.857 bits (294), Expect = 6.105e-26 Identity = 65/178 (36.52%), Postives = 105/178 (58.99%), Query Frame = -3 Query: 231 DSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNYKETSGQETIKLAIRALLEV--VESGGKNIEVAVMTREKG---LKQLDEAEIDAMV 749 DS K+ L ++I+ AG+ ADA +LIN R S+R + + + VE + + + +Q+YTQ GG RPFG+S L +G+D + G LYQ+DPSG ++ WKA G N + L++ YK + +E +LAI+ L + V+ + +E+AV+TR G L++L E+DA++ Sbjct: 58 DSVMTEKVYRLSDNISCTVAGITADANILINHLRWWAASYRNSYGEEMPVEQLVQNLCNEKQRYTQIGGKRPFGVSLLYIGWDKHYGY-QLYQSDPSGNYTGWKATCIGSNHQAAVTLLKQEYKSPNLEEAKQLAIKVLWKTLDVKLASEKVEMAVLTRRDGKTVLEELTTKEVDALI 234
BLAST of CV887275 vs. ExPASy Swiss-Prot
Match: PSMA_METVS (Proteasome subunit alpha OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=psmA PE=3 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 7.973e-26 Identity = 67/157 (42.68%), Postives = 97/157 (61.78%), Query Frame = -3 Query: 285 DSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNYKET-SGQETIKLAIRALLEVVES-GGKNIEVAVM 749 D S+ KI +D+HI A +GL ADARVLI+RAR+E Q +R++ + +TVE + + I ++Q YT GG RPFGL+ LI G D ++ L++TDPSG +KA A G E LE+ Y E S E ++LAI AL + E +NI++A++ Sbjct: 62 DVSSIEKIFQIDDHIVAATSGLVADARVLIDRARVEAQVNRISYGEAITVEALAKKICDIKQAYTHHGGARPFGLALLITGIDRHSA--RLFETDPSGALIEYKATAIGSGRPVAMEILEEKYDENMSVSEGMELAIYALSKTTEELKPENIDMAIV 216
BLAST of CV887275 vs. ExPASy Swiss-Prot
Match: PSMA_METM7 (Proteasome subunit alpha OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=psmA PE=3 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 7.973e-26 Identity = 70/176 (39.77%), Postives = 107/176 (60.80%), Query Frame = -3 Query: 231 DSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNYKET-SGQETIKLAIRALLEVVES-GGKNIEVAVMTRE-KGLKQLDEAEIDAMV 749 D S+ KI +D+HI A +GL ADARVLI+RAR+E Q +R++ + +TVE + + I ++Q YTQ GG RPFGL+ LI G D ++ L++TDPSG +KA A G E LE Y E + E ++LA+ AL + E +NI++A++ K ++++ EI+ +V Sbjct: 62 DVSSIEKIFQIDDHIVAATSGLVADARVLIDRARLEAQMNRISYGEAITVEALAKKICDIKQAYTQHGGARPFGLALLITGIDRHSA--RLFETDPSGALIEYKATAIGSGRPIAMEVLESKYDENMTVNEGMELALYALSKTTEELKPENIDMAIVKDSGKLVEKISVDEIEKIV 235
BLAST of CV887275 vs. ExPASy Swiss-Prot
Match: PSMA_METM5 (Proteasome subunit alpha OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=psmA PE=3 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 7.973e-26 Identity = 70/176 (39.77%), Postives = 107/176 (60.80%), Query Frame = -3 Query: 231 DSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNYKE-TSGQETIKLAIRALLEVVES-GGKNIEVAVMTRE-KGLKQLDEAEIDAMV 749 D S+ KI +D+HI A +GL ADARVLI+RAR+E Q +R++ + +TVE + + I ++Q YTQ GG RPFGL+ LI G D ++ L++TDPSG +KA A G E LE Y E + E ++LA+ AL + E +NI++A++ K ++++ EI+ +V Sbjct: 62 DVSSIEKIFQIDDHIVAATSGLVADARVLIDRARLEAQMNRISYGEAITVEALAKKICDIKQAYTQHGGARPFGLALLITGIDRHSA--RLFETDPSGALIEYKATAIGSGRPIAMEVLESKYSEDMTVNEGMELALYALSKTTEELKPENIDMAIVKDSGKLVEKISVDEIEKIV 235
BLAST of CV887275 vs. ExPASy Swiss-Prot
Match: PSMA_NATPD (Proteasome subunit alpha OS=Natronomonas pharaonis (strain DSM 2160 / ATCC 35678) GN=psmA PE=3 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 1.041e-25 Identity = 69/173 (39.88%), Postives = 102/173 (58.96%), Query Frame = -3 Query: 237 SVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNYKETSGQET-IKLAIRALLEVVESG----GKNIEVAVMTREKGLKQLDEAEIDA 740 SV KI D+HI +A AG ADAR LI+ AR + Q ++L ++P+ VE +T+ + Q+YTQ GG RPFG++ +I G + G P LY+TDPSGT W+A A G + ++E+LE++Y E+ E I LA+ AL V + G + + + G QL + EI+A Sbjct: 65 SVEKIHKADDHIGIASAGHVADARQLIDFARRQAQVNQLRYDEPIGVETLTKAVTDHIQQYTQVGGARPFGVALIIGGIE--DGEPRLYETDPSGTPYEWQALAVGADRGDIQEYLEEHYSESLDTEAGIGLALEALASVNDDSLTPEGIGLATVTVDDDDGFSQLSDEEIEA 235
BLAST of CV887275 vs. ExPASy Swiss-Prot
Match: PSMA_METAC (Proteasome subunit alpha OS=Methanosarcina acetivorans GN=psmA PE=3 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 1.041e-25 Identity = 68/177 (38.42%), Postives = 104/177 (58.76%), Query Frame = -3 Query: 231 DSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNYKETSGQE-TIKLAIRALLEVVES--GGKNIEVAVMTRE-KGLKQLDEAEIDAMV 749 ++ S+ KI +D HI A +GL ADAR L++RAR+E Q +R++ ++P+ VE I++ I +Q YTQ GGVRP+G + LI G D P L++TDPSG +KA A G N++ E E +Y+E + I L + AL + E +EV V++ E K ++L E++ V Sbjct: 59 EAESIEKIFQIDEHIGAATSGLVADARSLVDRARVEAQVNRVSYDEPIGVEVISKKICDHKQTYTQYGGVRPYGTALLIAGVD--DNKPRLFETDPSGALLEYKATAIGAGRNAVVEVFEADYREDMNMDAAILLGMDALYKAAEGKFDAGTLEVGVVSLEDKKFRKLGPEEVENYV 233
BLAST of CV887275 vs. ExPASy Swiss-Prot
Match: PSMA_METM6 (Proteasome subunit alpha OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=psmA PE=3 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.360e-25 Identity = 70/176 (39.77%), Postives = 106/176 (60.23%), Query Frame = -3 Query: 231 DSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNYKETS-GQETIKLAIRALLEVVES-GGKNIEVAVMTRE-KGLKQLDEAEIDAMV 749 D S+ KI +D+HI A +GL ADARVLI+RAR+E Q +R++ + +TVE + + I ++Q YTQ GG RPFGL+ LI G D ++ L++TDPSG +KA A G E LE Y E E ++LA+ AL + E +NI++A++ K ++++ EI+ +V Sbjct: 62 DVSSIEKIFQIDDHIVAATSGLVADARVLIDRARLEAQMNRISYGEAITVEALAKKICDIKQAYTQHGGARPFGLALLITGIDRHSA--RLFETDPSGALIEYKATAIGSGRPIAMEVLESKYDENMIVSEGMELALYALSKTTEELKPENIDMAIVKDSGKLVEKISVDEIEKIV 235
BLAST of CV887275 vs. ExPASy Swiss-Prot
Match: PSA2_TRYBB (Proteasome subunit alpha type-2 OS=Trypanosoma brucei brucei PE=2 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.360e-25 Identity = 61/142 (42.96%), Postives = 86/142 (60.56%), Query Frame = -3 Query: 327 DSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNY-KETSGQETIKLAIRALLE 749 DS ++ K+ +LD+H+ +G+ D RVL++ AR CQ +RLT +P+ + + R I+ L Q++TQSGGVRPFG S L+ G D LYQ DPSGTF WKA + G+ S R FLEK Y E ++ + A+ L E Sbjct: 56 DSLTLHKVFALDDHVGCTYSGIGPDCRVLVDAARRACQRYRLTYHEPMPISQLVRQISFLFQEFTQSGGVRPFGCSLLVAGADSRGN--HLYQLDPSGTFWTWKATSIGKGSPDARTFLEKRYTNEMEIEDAVHTALLTLKE 195 The following BLAST results are available for this feature:
BLAST of CV887275 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 166
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Sequences
The
following sequences are available for this feature:
EST sequence >CV887275 ID=CV887275; Name=CV887275; organism=Citrus sinensis; type=EST; length=751bpback to top |