CX044032

Overview
NameCX044032
Unique NameCX044032
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length725
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CX044032 vs. ExPASy Swiss-Prot
Match: UB2D3_RAT (Ubiquitin-conjugating enzyme E2 D3 OS=Rattus norvegicus GN=Ube2d3 PE=2 SV=1)

HSP 1 Score: 256.144 bits (653), Expect = 1.351e-67
Identity = 117/146 (80.14%), Postives = 127/146 (86.99%), Query Frame = -2 
Query:  287 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRNKYETTARSWTQKYAM 724
            A KRI KEL DL +DPP  CSAGPV +DMFHWQATIMGP DSPY GGVF +TIHFP DYPFKPPKVAF T+++HPNINSNGSICLDIL+ QWSPALTISKVLLSICSLL DPNPDDPLVPEIA +YKTDR+KY   +R WTQKYAM
Sbjct:    2 ALKRINKELSDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDRDKYNRISREWTQKYAM 147
[Close]
BLAST of CX044032 vs. ExPASy Swiss-Prot
Match: UB2D3_PONAB (Ubiquitin-conjugating enzyme E2 D3 OS=Pongo abelii GN=UBE2D3 PE=2 SV=1)

HSP 1 Score: 256.144 bits (653), Expect = 1.351e-67
Identity = 117/146 (80.14%), Postives = 127/146 (86.99%), Query Frame = -2 
Query:  287 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRNKYETTARSWTQKYAM 724
            A KRI KEL DL +DPP  CSAGPV +DMFHWQATIMGP DSPY GGVF +TIHFP DYPFKPPKVAF T+++HPNINSNGSICLDIL+ QWSPALTISKVLLSICSLL DPNPDDPLVPEIA +YKTDR+KY   +R WTQKYAM
Sbjct:    2 ALKRINKELSDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDRDKYNRISREWTQKYAM 147
[Close]
BLAST of CX044032 vs. ExPASy Swiss-Prot
Match: UB2D3_MOUSE (Ubiquitin-conjugating enzyme E2 D3 OS=Mus musculus GN=Ube2d3 PE=2 SV=1)

HSP 1 Score: 256.144 bits (653), Expect = 1.351e-67
Identity = 117/146 (80.14%), Postives = 127/146 (86.99%), Query Frame = -2 
Query:  287 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRNKYETTARSWTQKYAM 724
            A KRI KEL DL +DPP  CSAGPV +DMFHWQATIMGP DSPY GGVF +TIHFP DYPFKPPKVAF T+++HPNINSNGSICLDIL+ QWSPALTISKVLLSICSLL DPNPDDPLVPEIA +YKTDR+KY   +R WTQKYAM
Sbjct:    2 ALKRINKELSDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDRDKYNRISREWTQKYAM 147
[Close]
BLAST of CX044032 vs. ExPASy Swiss-Prot
Match: UB2D3_MACFA (Ubiquitin-conjugating enzyme E2 D3 OS=Macaca fascicularis GN=UBE2D3 PE=2 SV=1)

HSP 1 Score: 256.144 bits (653), Expect = 1.351e-67
Identity = 117/146 (80.14%), Postives = 127/146 (86.99%), Query Frame = -2 
Query:  287 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRNKYETTARSWTQKYAM 724
            A KRI KEL DL +DPP  CSAGPV +DMFHWQATIMGP DSPY GGVF +TIHFP DYPFKPPKVAF T+++HPNINSNGSICLDIL+ QWSPALTISKVLLSICSLL DPNPDDPLVPEIA +YKTDR+KY   +R WTQKYAM
Sbjct:    2 ALKRINKELSDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDRDKYNRISREWTQKYAM 147
[Close]
BLAST of CX044032 vs. ExPASy Swiss-Prot
Match: UB2D3_HUMAN (Ubiquitin-conjugating enzyme E2 D3 OS=Homo sapiens GN=UBE2D3 PE=1 SV=1)

HSP 1 Score: 256.144 bits (653), Expect = 1.351e-67
Identity = 117/146 (80.14%), Postives = 127/146 (86.99%), Query Frame = -2 
Query:  287 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRNKYETTARSWTQKYAM 724
            A KRI KEL DL +DPP  CSAGPV +DMFHWQATIMGP DSPY GGVF +TIHFP DYPFKPPKVAF T+++HPNINSNGSICLDIL+ QWSPALTISKVLLSICSLL DPNPDDPLVPEIA +YKTDR+KY   +R WTQKYAM
Sbjct:    2 ALKRINKELSDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDRDKYNRISREWTQKYAM 147
[Close]
BLAST of CX044032 vs. ExPASy Swiss-Prot
Match: UB2D2_PIG (Ubiquitin-conjugating enzyme E2 D2 OS=Sus scrofa GN=UBE2D2 PE=2 SV=1)

HSP 1 Score: 256.144 bits (653), Expect = 1.351e-67
Identity = 117/146 (80.14%), Postives = 127/146 (86.99%), Query Frame = -2 
Query:  287 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRNKYETTARSWTQKYAM 724
            A KRI KEL DL +DPP  CSAGPV +DMFHWQATIMGP DSPY GGVF +TIHFP DYPFKPPKVAF T+++HPNINSNGSICLDIL+ QWSPALTISKVLLSICSLL DPNPDDPLVPEIA +YKTDR+KY   +R WTQKYAM
Sbjct:    2 ALKRIHKELNDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDRDKYNRISREWTQKYAM 147
[Close]
BLAST of CX044032 vs. ExPASy Swiss-Prot
Match: UBC4_CANAL (Ubiquitin-conjugating enzyme E2 4 OS=Candida albicans GN=UBC4 PE=2 SV=1)

HSP 1 Score: 254.988 bits (650), Expect = 3.010e-67
Identity = 113/144 (78.47%), Postives = 130/144 (90.28%), Query Frame = -2 
Query:  287 KRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRNKYETTARSWTQKYAM 718
            KRI KEL DL +DPP+SCSAGPV +D++HWQA+IMGPPDSPYAGGVF ++IHFP DYP KPPK+A  TK++HPNINSNG+ICLDILK+QWSPALTISKVLLSICSLLTD NPDDPLVPEIAH+YK DR KYE TA+ WT+KYA+
Sbjct:    4 KRINKELSDLGRDPPSSCSAGPVGDDLYHWQASIMGPPDSPYAGGVFFLSIHFPTDYPLKPPKIALTTKIYHPNINSNGNICLDILKDQWSPALTISKVLLSICSLLTDANPDDPLVPEIAHIYKQDRKKYEATAKEWTKKYAV 147
[Close]
BLAST of CX044032 vs. ExPASy Swiss-Prot
Match: UB2D1_MOUSE (Ubiquitin-conjugating enzyme E2 D1 OS=Mus musculus GN=Ube2d1 PE=2 SV=1)

HSP 1 Score: 254.218 bits (648), Expect = 5.135e-67
Identity = 113/146 (77.40%), Postives = 127/146 (86.99%), Query Frame = -2 
Query:  287 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRNKYETTARSWTQKYAM 724
            A KRI KEL DLQ+DPP  CSAGPV +D+FHWQATIMGPPDS Y GGVF +T+HFP DYPFKPPK+AF TK++HPNINSNGSICLDIL+ QWSPALT+SKVLLSICSLL DPNPDDPLVP+IA +YK+D+ KY   AR WTQKYAM
Sbjct:    2 ALKRIQKELSDLQRDPPAHCSAGPVGDDLFHWQATIMGPPDSAYQGGVFFLTVHFPTDYPFKPPKIAFTTKIYHPNINSNGSICLDILRSQWSPALTVSKVLLSICSLLCDPNPDDPLVPDIAQIYKSDKEKYNRHAREWTQKYAM 147
[Close]
BLAST of CX044032 vs. ExPASy Swiss-Prot
Match: UB2D1_HUMAN (Ubiquitin-conjugating enzyme E2 D1 OS=Homo sapiens GN=UBE2D1 PE=1 SV=1)

HSP 1 Score: 254.218 bits (648), Expect = 5.135e-67
Identity = 113/146 (77.40%), Postives = 127/146 (86.99%), Query Frame = -2 
Query:  287 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRNKYETTARSWTQKYAM 724
            A KRI KEL DLQ+DPP  CSAGPV +D+FHWQATIMGPPDS Y GGVF +T+HFP DYPFKPPK+AF TK++HPNINSNGSICLDIL+ QWSPALT+SKVLLSICSLL DPNPDDPLVP+IA +YK+D+ KY   AR WTQKYAM
Sbjct:    2 ALKRIQKELSDLQRDPPAHCSAGPVGDDLFHWQATIMGPPDSAYQGGVFFLTVHFPTDYPFKPPKIAFTTKIYHPNINSNGSICLDILRSQWSPALTVSKVLLSICSLLCDPNPDDPLVPDIAQIYKSDKEKYNRHAREWTQKYAM 147
[Close]
BLAST of CX044032 vs. ExPASy Swiss-Prot
Match: UB2D1_BOVIN (Ubiquitin-conjugating enzyme E2 D1 OS=Bos taurus GN=UBE2D1 PE=2 SV=1)

HSP 1 Score: 254.218 bits (648), Expect = 5.135e-67
Identity = 113/146 (77.40%), Postives = 127/146 (86.99%), Query Frame = -2 
Query:  287 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRNKYETTARSWTQKYAM 724
            A KRI KEL DLQ+DPP  CSAGPV +D+FHWQATIMGPPDS Y GGVF +T+HFP DYPFKPPK+AF TK++HPNINSNGSICLDIL+ QWSPALT+SKVLLSICSLL DPNPDDPLVP+IA +YK+D+ KY   AR WTQKYAM
Sbjct:    2 ALKRIQKELSDLQRDPPAHCSAGPVGDDLFHWQATIMGPPDSAYQGGVFFLTVHFPTDYPFKPPKIAFTTKIYHPNINSNGSICLDILRSQWSPALTVSKVLLSICSLLCDPNPDDPLVPDIAQIYKSDKEKYNRHAREWTQKYAM 147
The following BLAST results are available for this feature:
BLAST of CX044032 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 267
Match NameE-valueIdentityDescription
UB2D3_RAT1.351e-6780.14Ubiquitin-conjugating enzyme E2 D3 OS=Rattus norve... [more]
UB2D3_PONAB1.351e-6780.14Ubiquitin-conjugating enzyme E2 D3 OS=Pongo abelii... [more]
UB2D3_MOUSE1.351e-6780.14Ubiquitin-conjugating enzyme E2 D3 OS=Mus musculus... [more]
UB2D3_MACFA1.351e-6780.14Ubiquitin-conjugating enzyme E2 D3 OS=Macaca fasci... [more]
UB2D3_HUMAN1.351e-6780.14Ubiquitin-conjugating enzyme E2 D3 OS=Homo sapiens... [more]
UB2D2_PIG1.351e-6780.14Ubiquitin-conjugating enzyme E2 D2 OS=Sus scrofa G... [more]
UBC4_CANAL3.010e-6778.47Ubiquitin-conjugating enzyme E2 4 OS=Candida albic... [more]
UB2D1_MOUSE5.135e-6777.40Ubiquitin-conjugating enzyme E2 D1 OS=Mus musculus... [more]
UB2D1_HUMAN5.135e-6777.40Ubiquitin-conjugating enzyme E2 D1 OS=Homo sapiens... [more]
UB2D1_BOVIN5.135e-6777.40Ubiquitin-conjugating enzyme E2 D1 OS=Bos taurus G... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_14H12_b Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-14H12-P24-1-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX044032 ID=CX044032; Name=CX044032; organism=Citrus sinensis; type=EST; length=725bp
TTTTTTTTTTTTTTTTTCTATAAAGAAAGATTTTTATCATTCAGAATGGA
CGTACAAATTTGGCTGACCAAGTGACATTATCAAAACACATTTGATTGAC
CAAAGTGACATTATCCATACAACAATTAAGAAGCAACCCGTTTCTCCTTT
CCAATTCGGGGGATGTAGTGGACCTTTCTTATGGTCCACTTTTTAGGATT
GAACAGACAGAATATTCATACATTAACTCGAAACCAGAATTAAAAAGAAA
AGGAACCCCCTCACACACCATAACCCAGGTTTAGCCCATGGCATACTTCT
GGGTCCAGCTCCTTGCAGTTGTCTCGTACTTGTTCCTGTCGGTCTTGTAC
ATGTGAGCAATTTCTGGTACCAACGGATCATCGGGATTTGGATCCGTCAA
TAATGAACAGATTGATAGCAACACCTTGGAAATGGTAAGAGCAGGACTCC
ATTGTTCCTTCAAGATGTCAAGGCAAATGCTCCCATTGCTATTTATGTTA
GGATGAAATACCTTTGTCCTGAATGCTACCTTGGGAGGCTTGAATGGATA
GTCTGGGGGAAAATGGATGGTAACTAGAAAAACACCCCCAGCATACGGAC
TATCTGGAGGACCCATGATTGTCGCCTGCCAATGAAACATGTCTTCAGCA
ACAGGACCGGCACTGCATGATGTAGGAGGATCCTTCTGCAAATCTTTGAG
CTCCTTCAAGATCCGTTTCGACGCC
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