CV887202

Overview
NameCV887202
Unique NameCV887202
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length879
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV887202 vs. ExPASy Swiss-Prot
Match: S2533_HUMAN (Solute carrier family 25 member 33 OS=Homo sapiens GN=SLC25A33 PE=2 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.590e-26
Identity = 83/267 (31.09%), Postives = 127/267 (47.57%), Query Frame = 2
Query:  140 FMCPLDVIKTRLQVHGLPEGT-----------------HXXXXXXXXXXXLQNILKNEGLKGLYRGLSPTLLALLPNWAVYFAVYERLKGLLRTHGDGNSQLSVGKNMXXXXXXXXXXXXXXNPLWVVKTRLQTQGMRSNVVPYKSILSALRRISHEEGMRGLYSGILPSLAGVSHVAIQFPAYERIKHYM------AKKDDTDVDKLNPGSVMIASSIAKVLASVMTYPHEVVRSRLQEQGQNRKVDVQYAGVVDCVKKVFQKEGF 871
            F CPL+VIKTRLQ   L   T                             L++IL+ EG K L+RGL P L+ + P+ AVYFA Y + K         NS +    ++              NP+W+VKTR+Q +  +       + L   R +   EG+RG Y G+  S AG+S   I F  YE +K Y+      +  + T+ +  +   +M A++++K  AS + YPHEV+R+RL+E+G       +Y   V   + VF++EG+
Sbjct:   28 FTCPLEVIKTRLQSSRLALRTVYYPQVHLGTISGAGMVRPTSVTPGLFQVLKSILEKEGPKSLFRGLGPNLVGVAPSRAVYFACYSKAKEQFNGIFVPNSNI---VHIFSAGSAAFITNSLMNPIWMVKTRMQLE-QKVRGSKQMNTLQCARYVYQTEGIRGFYRGLTASYAGISETIICFAIYESLKKYLKEAPLASSANGTEKNSTSFFGLMAAAALSKGCASCIAYPHEVIRTRLREEG------TKYKSFVQTARLVFREEGY 284          
BLAST of CV887202 vs. ExPASy Swiss-Prot
Match: YKQ9_SCHPO (Uncharacterized mitochondrial carrier C688.09 OS=Schizosaccharomyces pombe GN=SPAC688.09 PE=2 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 6.043e-26
Identity = 83/268 (30.97%), Postives = 128/268 (47.76%), Query Frame = 2
Query:  149 PLDVIKTRLQVHGLPEG------------THXXXXXXXXXXXLQNILKNEGLKGLYRGLSPTLLALLPNWAVYFAVY---ERLKGLLRTHGDGNSQLSVGKNMXXXXXXXXXXXXXXNPLWVVKTRLQTQGMRSNVVPYKSILSALRRISHEEGMRGLYSGILPSLAGVSHVAIQFPAYERIKHYMAKK---------DDTDVDK-LNPGSVMIASSIAKVLASVMTYPHEVVRSRLQEQGQNRKVDVQYAGVVDCVKKVFQKEGFPG 877
            PLDV+KTRLQ     +             T            L+N+  +EG + L+RGL P L+  +P  ++ F  Y   +R+   L  +G  NSQ+    ++              NP+W+VKTRLQ          Y+S +  + +    EG RGLY G+  SL GV    +Q+  YE+ KH +A +          +T  DK L+ G  +  + IAK +A+ + YPHEVVR+RL+ Q  +     +Y G++ C K V+ ++G  G
Sbjct:   68 PLDVVKTRLQSDFYKDRFLKQTAKSKSPLTAAYRHFMDTCIILKNVKVHEGTRALFRGLGPNLIGTIPARSINFFSYGNGKRILADLFNNGQENSQI----HLMAAAIAGVITSAATNPIWLVKTRLQLDKKSGQAAQYRSSIDCIIKTIRLEGFRGLYKGLSASLLGVGESTLQWVLYEKFKHAVAIRQLRRKELGIQETIYDKVLDWGGKLGGAGIAKFMAAGIAYPHEVVRTRLR-QSPSINGTPKYTGLIQCFKLVWMEQGIVG 330          
BLAST of CV887202 vs. ExPASy Swiss-Prot
Match: S2536_MOUSE (Solute carrier family 25 member 36 OS=Mus musculus GN=Slc25a36 PE=2 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 7.892e-26
Identity = 82/287 (28.57%), Postives = 131/287 (45.64%), Query Frame = 2
Query:   74 LTRRVLLSHXXXXXXXXXXXXTFMCPLDVIKTRLQ------------VHGLPEGTHXXXXXXXXXXXLQNILKNEGLKGLYRGLSPTLLALLPNWAVYFAVYERLKGLLRTHGDGNSQLSVGKNMXXXXXXXXXXXXXXNPLWVVKTRLQTQGMRSNVVPYKSILSALRRISHEEGMRGLYSGILPSLAGVSHVAIQFPAYERIKHYM-----AKKDDTDVDKLNPGS----VMIASSIAKVLASVMTYPHEVVRSRLQEQGQNRKVDVQYAGVVDCVKKVFQKEGF 871
            +++R  L H               CPL+V+KTRLQ            ++ +   +            L+ IL+ EG + L+RGL P L+ + P+ A+YFA Y   K  L    D +S      +M              NP+W++KTRLQ    R+           +R++   +G+RG Y G+  S AG+S   I F  YE IK  +     A   +TD + +   S    +M+A++ +K  A+ + YPHEVVR+RL+E+G       +Y      +  + Q+EG+
Sbjct:    1 MSQRDTLVHLFAGGCGGTVGAILTCPLEVVKTRLQSSSVTLYISEVQLNTMAGASVNRVVSPGPLHCLKAILEKEGPRSLFRGLGPNLVGVAPSRAIYFAAYSNCKEKLNGVFDPDS---TQVHMASAAMAGFTAITATNPIWLIKTRLQLDA-RTRGEKQMGAFECVRKVYQTDGLRGFYRGMSASYAGISETVIHFVIYESIKQKLLECKTASMMETDEESVKEASDFVRMMLAAATSKTCATTIAYPHEVVRTRLREEG------TKYRSFFQTLSLIVQEEGY 277          
BLAST of CV887202 vs. ExPASy Swiss-Prot
Match: S2536_DANRE (Solute carrier family 25 member 36-A OS=Danio rerio GN=slc25a36a PE=2 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 1.031e-25
Identity = 83/287 (28.92%), Postives = 130/287 (45.30%), Query Frame = 2
Query:   74 LTRRVLLSHXXXXXXXXXXXXTFMCPLDVIKTRLQVHGLP------------EGTHXXXXXXXXXXXLQNILKNEGLKGLYRGLSPTLLALLPNWAVYFAVYERLKGLLRTHGDGNSQLSVGKNMXXXXXXXXXXXXXXNPLWVVKTRLQTQGMRSNVVPYKSILSALRRISHEEGMRGLYSGILPSLAGVSHVAIQFPAYERIKH---------YMAKKDDTDVDKLNPGSVMIASSIAKVLASVMTYPHEVVRSRLQEQGQNRKVDVQYAGVVDCVKKVFQKEGF 871
            +++R  L H               CPL+V+KTRLQ   +               +            L+ IL+ EG + L+RGL P L+ + P+ A+YFA Y   K  L    D +   S   +M              NP+W++KTRLQ    R+      S    +RR+   +G+RG Y G+  S AG+S   I F  YE IK           M  +D++  D  +   +M+A++ +K  A+ + YPHEV+R+RL+E+G       +Y      +  VF++EG+
Sbjct:    1 MSQRDTLVHLFAGGCGGTVGAILTCPLEVVKTRLQSSSVTFYISEVQLSTVNGASVARMAPPGPLHCLKLILEKEGPRSLFRGLGPNLVGVAPSRAIYFAAYSTSKEKLNNVFDPD---STQVHMLSAGLAGFTAITATNPIWLIKTRLQLDA-RNRGERRMSAFECVRRVYQSDGLRGFYRGMSASYAGISETVIHFVIYESIKRKLIEHKANSNMDDEDESVKDASDFVGMMLAAATSKTCATSIAYPHEVIRTRLREEGS------KYRSFFQTLNMVFREEGY 277          
BLAST of CV887202 vs. ExPASy Swiss-Prot
Match: S2536_HUMAN (Solute carrier family 25 member 36 OS=Homo sapiens GN=SLC25A36 PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.944e-24
Identity = 80/287 (27.87%), Postives = 130/287 (45.30%), Query Frame = 2
Query:   74 LTRRVLLSHXXXXXXXXXXXXTFMCPLDVIKTRLQ------------VHGLPEGTHXXXXXXXXXXXLQNILKNEGLKGLYRGLSPTLLALLPNWAVYFAVYERLKGLLRTHGDGNSQLSVGKNMXXXXXXXXXXXXXXNPLWVVKTRLQTQGMRSNVVPYKSILSALRRISHEEGMRGLYSGILPSLAGVSHVAIQFPAYERIKHYM-----AKKDDTDVDKLNPGS----VMIASSIAKVLASVMTYPHEVVRSRLQEQGQNRKVDVQYAGVVDCVKKVFQKEGF 871
            +++R  L H               CPL+V+KTRLQ            ++ +   +            L+ IL+ EG + L+RGL P L+ + P+ A+YFA Y   K  L    D +   S   +M              NP+W++KTRLQ    R+           +R++   +G++G Y G+  S AG+S   I F  YE IK  +     A   + D + +   S    +M+A++ +K  A+ + YPHEVVR+RL+E+G       +Y      +  + Q+EG+
Sbjct:    1 MSQRDTLVHLFAGGCGGTVGAILTCPLEVVKTRLQSSSVTLYISEVQLNTMAGASVNRVVSPGPLHCLKVILEKEGPRSLFRGLGPNLVGVAPSRAIYFAAYSNCKEKLNDVFDPD---STQVHMISAAMAGFTAITATNPIWLIKTRLQLDA-RNRGERRMGAFECVRKVYQTDGLKGFYRGMSASYAGISETVIHFVIYESIKQKLLEYKTASTMENDEESVKEASDFVGMMLAAATSKTCATTIAYPHEVVRTRLREEG------TKYRSFFQTLSLLVQEEGY 277          
BLAST of CV887202 vs. ExPASy Swiss-Prot
Match: S2536_CHICK (Solute carrier family 25 member 36 OS=Gallus gallus GN=SLC25A36 PE=2 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 9.648e-24
Identity = 81/289 (28.03%), Postives = 128/289 (44.29%), Query Frame = 2
Query:   74 LTRRVLLSHXXXXXXXXXXXXTFMCPLDVIKTRLQVHGLP--------------EGTHXXXXXXXXXXXLQNILKNEGLKGLYRGLSPTLLALLPNWAVYFAVYERLKGLLRTHGDGNSQLSVGKNMXXXXXXXXXXXXXXNPLWVVKTRLQTQGMRSNVVPYKSILSALRRISHEEGMRGLYSGILPSLAGVSHVAIQFPAYERIK-----HYMAKKDDTDVDKLNPGS----VMIASSIAKVLASVMTYPHEVVRSRLQEQGQNRKVDVQYAGVVDCVKKVFQKEGF 871
            +++R  L H               CPL+V+KTRLQ   +                              L+ IL+ EG + L+RGL P L+ + P+ A+YFA Y   K  L    + +   S   +M              NP+W+VKTRLQ    R+      S    +R++   +G++G Y G+  S AG+S   I F  YE IK     H  A   D++ +     S    +M+A++ +K  A+ + YPHEVVR+RL+E+G       +Y      +  + ++EG+
Sbjct:    1 MSQRDTLVHLFAGGCGGTVGAILTCPLEVVKTRLQSSSVTLYISEVHLNTVNGASVNRVTRVSPGPLHCLKMILQKEGPRSLFRGLGPNLVGVAPSRAIYFAAYSNCKEKLNNIFNPD---STQVHMISAGVAGFTAITMTNPIWLVKTRLQLDA-RNRGEKRMSAFECVRKVYRSDGIKGFYRGMSASYAGISETVIHFVIYESIKRKLLEHKTASAMDSEDESAKEASDFVGMMMAAATSKTCATSIAYPHEVVRTRLREEG------TKYRSFFQTLSLLVREEGY 279          
BLAST of CV887202 vs. ExPASy Swiss-Prot
Match: YID3_SCHPO (Uncharacterized mitochondrial carrier C227.03c OS=Schizosaccharomyces pombe GN=SPAC227.03c PE=2 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 1.067e-22
Identity = 84/297 (28.28%), Postives = 120/297 (40.40%), Query Frame = 2
Query:  143 MCPLDVIKTRLQVHGL---PEGTHXXXXXXXXXXXLQNILKNEGLKGLYRGLSPTLLALLPNWAVYFAVYERLKGLLRT-------HGDGNSQLSV---------------GKNMXXXXXXXXXXXXXXNPLWVVKTR--------------------------LQTQG-------------MRSNVVP------------------YKSILSALRRISHEEGMRGLYSGILPSLAGVSHVAIQFPAYERIKHYMAKKDDTDVDKLNPGSVMIASSIAKVLASVMTYPHEVVRSRLQ 787
            + PLDV+KTR Q         G             ++ I  NEG+ GLYRG+ P +L  LP+W++YF VYE+ K L          H   +S++ +               G  +              NP+WVVKTR                          LQT                R+NV                    Y +   A R+I   EG+   Y G+ PSL G  HV IQFP YE  K ++    D    K +   +++A++++K+ AS +TYPHEV+R+RLQ
Sbjct:   23 VAPLDVVKTRKQAQKAFYSTGGGKNTMVLGGTLSSMRTIFHNEGIAGLYRGVGPMMLGYLPSWSIYFVVYEKCKVLFGVNKKYTSLHEIDSSKVGIKASLDSSDKQFYRYWGGQIFSAVIAGAASVTLTNPIWVVKTRLVTQSHPRASSFVDKIAAATTVQFRNLQTDAPSVKWRMPRFWLKRRTNVKSSPSQHPVNPPTGPACSPAYNNTFDAFRKIYKYEGLAAFYRGLFPSLFGTLHVGIQFPLYEYFKSFL----DDFFGKKSNFHIVLAATLSKIAASTVTYPHEVLRTRLQ 315          
BLAST of CV887202 vs. ExPASy Swiss-Prot
Match: PM34_DICDI (Mitochondrial substrate carrier family protein Q OS=Dictyostelium discoideum GN=mcfQ PE=2 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 2.012e-21
Identity = 67/216 (31.02%), Postives = 107/216 (49.54%), Query Frame = 2
Query:  242 QNILKNEGLKGLYRGLSPTLLALLPNWAVYFAVYERLKGLLRTHGDGNSQLSVGKNMXXXXXXXXXXXXXXNPLWVVKTRLQTQGMRSNVVPYKSILSALRRISHEEGMRGLYSGILPSLAGVSHVAIQFPAYERIKHYMAKKDDTDVDKLNPGSVMIASSIAKVLASVMTYPHEVVRSRLQEQGQN----RKVDVQYAGVVDCVKKVFQKEGFPG 877
            + I+K E  + LY GL   L+ +  +  VY+  Y  LK +         +L   +N+               P+WVV TRLQ    +  V  +K I+         EG  GLY G++P+L  VS+ ++QF +YE+++    ++      KL    V I  +IAK++A ++TYP+ +V+SRLQ Q  N         QY G +D + K+F+ +GF G
Sbjct:   76 KRIIKEENWRTLYSGLKSALIGIGASSFVYYYWYTLLKSI-SLKLKNKQELGTIENLAIAALAGCANVLTTLPIWVVNTRLQINSDKGIVGQFKYIIK-------NEGFGGLYKGLIPALILVSNPSVQFVSYEKLRALWRRQSGR--TKLGGLEVFILGAIAKLIAGIVTYPYLLVKSRLQSQSGNASNPESQQQQYKGTLDAIGKIFKSDGFLG 281          
BLAST of CV887202 vs. ExPASy Swiss-Prot
Match: UCPB_DICDI (Mitochondrial substrate carrier family protein ucpB OS=Dictyostelium discoideum GN=ucpB PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 3.431e-21
Identity = 78/246 (31.71%), Postives = 120/246 (48.78%), Query Frame = 2
Query:  149 PLDVIKTRLQVHGLPEGTHXXXXXXXXXXXLQNILKNEGLKGLYRGLSPTLLALLPNWAVYFAVYERLKGLLRTHGDGNSQLSVGKNMXXXXXXXXXXXXXXNPLWVVKTRLQTQGMRSNVVPYKSILSALRRISHEEGMRGLYSGILPSLAGVSHV-AIQFPAYERIKHYMAKKDDTDVDKLNPGSVMIASSI-AKVLASVMTYPHEVVRSRLQEQG-QNRKVDVQYAGVVDCVKKVFQKEGFPG 877
            P+DV+KTR Q+HG  EG                I+KNEG+  +Y+GL+P+LL       +    Y+ +K       D N + ++   +              +P  ++K R+Q     S  V Y SI SA + I  +EG++GL+ G+ P+    + + A Q P+Y+ IKH +       VD L    V I SSI A ++AS+ T P ++V++R+  Q   +  V + Y    DC KK FQ EG  G
Sbjct:   27 PVDVLKTRFQIHG--EGIDSKSLGLVNGTI--KIIKNEGISAMYKGLTPSLLREATYSTLRMGGYDVIKNYFI---DSNGKTNLLSKVTSGALSGALGACITSPTDLIKVRMQAS---SKGVKYDSISSAFKEIIAKEGIKGLWKGVGPTTQRAALLTASQIPSYDHIKHMILDHGIIQVDGL---QVHIVSSIFAGLIASITTSPVDLVKTRIMNQPFDSNGVGLIYKSSYDCFKKTFQSEGISG 259          
BLAST of CV887202 vs. ExPASy Swiss-Prot
Match: PM34_MOUSE (Peroxisomal membrane protein PMP34 OS=Mus musculus GN=Slc25a17 PE=2 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 2.224e-20
Identity = 76/224 (33.93%), Postives = 109/224 (48.66%), Query Frame = 2
Query:  137 TFMCPLDVIKTRLQVHGLPEG--THXXXXXXXXXXXLQNILKNEGLKGLYRGLSPTLLALLPNWAVYFAVYERLKGLLRTHGDGNSQLSVGKNMXXXXXXXXXXXXXXNPLWVVKTRLQTQGMR---SNVVP--YKSILSALRRISHEEGMRGLYSGILPSLAGVSHVAIQFPAYERIKHYMAKKDDTDVDKLNPGSVMIASSIAKVLASVMTYPHEVVRSRLQ 787
            T   PLD  + RLQV    +   TH           L  I+K EGL   YRG  P + +L  +  VYF  +  LK +         + S GK++               PLWVV TRL+ QG +    +++P  YK I+ A  +I  +EG+  L++G  PSL  V + AIQF  YE +K  + KK      KL+   V I  +IAK +A+ +TYP + V+S L+
Sbjct:   25 TVFFPLDTARLRLQVDEKRKSKTTHAV---------LLEIIKEEGLLAPYRGWFPVISSLCCSNFVYFYTFNSLKAVWVK----GQRSSTGKDLVVGFVAGVVNVLLTTPLWVVNTRLKLQGAKFRNEDIIPTNYKGIIDAFHQIIRDEGILALWNGTFPSLLLVFNPAIQFMFYEGLKRQLLKKR----MKLSSLDVFIIGAIAKAIATTVTYPMQTVQSILR 231          
The following BLAST results are available for this feature:
BLAST of CV887202 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 148
Match NameE-valueIdentityDescription
S2533_HUMAN1.590e-2631.09Solute carrier family 25 member 33 OS=Homo sapiens... [more]
YKQ9_SCHPO6.043e-2630.97Uncharacterized mitochondrial carrier C688.09 OS=S... [more]
S2536_MOUSE7.892e-2628.57Solute carrier family 25 member 36 OS=Mus musculus... [more]
S2536_DANRE1.031e-2528.92Solute carrier family 25 member 36-A OS=Danio reri... [more]
S2536_HUMAN1.944e-2427.87Solute carrier family 25 member 36 OS=Homo sapiens... [more]
S2536_CHICK9.648e-2428.03Solute carrier family 25 member 36 OS=Gallus gallu... [more]
YID3_SCHPO1.067e-2228.28Uncharacterized mitochondrial carrier C227.03c OS=... [more]
PM34_DICDI2.012e-2131.02Mitochondrial substrate carrier family protein Q O... [more]
UCPB_DICDI3.431e-2131.71Mitochondrial substrate carrier family protein ucp... [more]
PM34_MOUSE2.224e-2033.93Peroxisomal membrane protein PMP34 OS=Mus musculus... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_029H01_T3 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_029_T3_H01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV887202 ID=CV887202; Name=CV887202; organism=Citrus sinensis; type=EST; length=879bp
CTCTTTCGAAATTGTAGAAGACATGGTGAGTGAAAAAGGAGGTGGAGACG
CCGATGGAGAATCTTTACAAGCTCTAACACGCAGGGTCTTACTTTCCCAC
GCGGCAGCTGGAGCTGCTGCTGGTGCAATTGCGGCAACATTTATGTGCCC
GTTGGATGTGATCAAGACAAGGTTACAGGTACATGGCCTTCCCGAAGGCA
CTCACTCTGGACGCAGAGGTAGTATCATTATAATAAGTTTACAGAACATA
TTGAAGAATGAAGGTCTGAAGGGATTGTATCGTGGTCTTTCACCGACATT
ACTAGCATTACTTCCAAATTGGGCTGTATACTTCGCAGTTTATGAGCGAT
TAAAAGGTCTTCTCCGAACACATGGGGATGGCAATAGTCAACTCTCAGTT
GGGAAAAATATGATAGCTGCAGCTGGTGCTGGGGCTGCTACAGCCATCAC
AACTAATCCACTGTGGGTTGTGAAGACCAGACTCCAAACTCAGGGAATGA
GATCAAATGTGGTTCCCTACAAAAGCATACTTTCTGCTCTGAGAAGGATT
TCTCATGAAGAAGGCATGCGAGGGTTATATAGTGGCATTCTGCCTTCGTT
GGCCGGAGTTAGTCATGTTGCTATTCAGTTTCCTGCATATGAGAGAATCA
AGCATTACATGGCCAAAAAGGATGACACAGATGTTGATAAGCTAAATCCT
GGAAGTGTTATGATTGCTTCTTCAATAGCAAAAGTACTTGCCTCTGTAAT
GACTTACCCACATGAGGTTGTACGTTCAAGGCTTCAAGAGCAAGGGCAGA
ACAGAAAGGTTGATGTACAATATGCAGGCGTTGTTGATTGTGTCAAGAAG
GTATTCCAAAAGGAAGGTTTCCCTGGCTT
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