CV887202

Overview
NameCV887202
Unique NameCV887202
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length879
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV887202 vs. ExPASy Swiss-Prot
Match: PM47A_CANBO (Peroxisomal membrane protein PMP47A OS=Candida boidinii GN=PMP47A PE=1 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 6.268e-15
Identity = 53/193 (27.46%), Postives = 93/193 (48.19%), Query Frame = 2
Query:  239 LQNILKNEGLKGLYRGLSPTLLALLPNWAVYFAVYERLKGLLRTHGD----GNSQ-------LSVGKNMXXXXXXXXXXXXXXNPLWVVKTRLQTQGMRSNVVPYKSILSALRRISHEEGMRGLYSGILPSLAGVSHVAIQFPAYERIKHYMAKKDDTDVDKLNPGSVMIASSIAKVLASVMTYPHEVVRSRL 784
            L+ ILK++G KGLY GL   L  +     VY+  YE     L    +     NS+       LSV ++M              NP+WV  TR+         +   + + A+  I   EG + L++GI+P+L  V +  IQ+  +E++K ++ K    ++    P   ++  +  K++A+++TYP+  +RSR+
Sbjct:   80 LKKILKDQGAKGLYNGLESALFGIAVTNFVYYYFYELTGKTLNRRSNPQTASNSKKVALKKGLSVWQSMAAGAVAGTISRVATNPIWVANTRMTILSKNQGKLGKLNTIEAIIYILKNEGWQKLFTGIVPALFLVLNPIIQYTIFEQLKSFIVKIKKRNI---TPVDALLLGAFGKLIATIITYPYITLRSRM 269          
BLAST of CV887202 vs. ExPASy Swiss-Prot
Match: BT1_MAIZE (Protein brittle-1, chloroplastic/amyloplastic OS=Zea mays GN=BT1 PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 6.268e-15
Identity = 69/250 (27.60%), Postives = 113/250 (45.20%), Query Frame = 2
Query:  137 TFMCPLDVIKTRLQVHGLPEGTHXXXXXXXXXXXLQNILKNEGLKGLYRGLSPTLLALLPNWAVYFAVYERLKGLLRTHGDGNSQLSVGKNMXXXXXXXXXXXXXXNPLWVVKTRLQTQGMRSNVVPYKSILSALRRISHEEGMRGLYSGILPSLAG-VSHVAIQFPAYERIKH-YMAKKDDTDVDKLNPGSVMIASSIAKVLASVMTYPHEVVRSRLQEQG-QNRKVDVQYAGVVDCVKKVFQKEGFPG 877
            TF+ PL+ I+T L V  +   +             Q I++NEG  GL+RG +  +L + P+ A+    Y+  K  L   GD   ++ +   +               P+ ++KTR+    +  +V  Y ++  A  +I  +EG   LY G+ PSL G V + A  F AYE +K  Y           + P + ++  S A  +AS  T+P EV R ++Q      R+V   Y  V+  +  + +KEG  G
Sbjct:  150 TFVAPLETIRTHLMVGSIGVDS--------MAGVFQWIMQNEGWTGLFRGNAVNVLRVAPSKAIEHFTYDTAKKFLTPKGDEPPKIPIPTPLVAGALAGFASTLCTYPMELIKTRVT---IEKDV--YDNVAHAFVKILRDEGPSELYRGLTPSLIGVVPYAACNFYAYETLKRLYRRATGRRPGADVGPVATLLIGSAAGAIASSATFPLEVARKQMQVGAVGGRQV---YQNVLHAIYCILKKEGAGG 383          
BLAST of CV887202 vs. ExPASy Swiss-Prot
Match: SCMC1_MOUSE (Calcium-binding mitochondrial carrier protein SCaMC-1 OS=Mus musculus GN=Slc25a24 PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 8.186e-15
Identity = 64/250 (25.60%), Postives = 105/250 (42.00%), Query Frame = 2
Query:  137 TFMCPLDVIKTRLQVHGLPEGTHXXXXXXXXXXXLQNILKNEGLKGLYRGLSPTLLALLPNWAVYFAVYERLKGLLRTHGDGNSQLSVGKNMXXXXXXXXXXXXXXNPLWVVKTRLQTQGMRSNVVPYKSILSALRRISHEEGMRGLYSGILPSLAG-VSHVAIQFPAYERIKHYMAKKDDTDVDKLNPGSVMIAS--SIAKVLASVMTYPHEVVRSRLQEQGQNRKVDVQYAGVVDCVKKVFQKEGFPG 877
            T   PLD +K  +QVHG                  + ++K  G++ L+RG    ++ + P  AV F  YE+ K LL   G    +L   +                 P+ V+KTRL      +    Y  I    ++I   EG    Y G +P+L G + +  I    YE +K Y    D+   D +NPG +++ S  +++     + +YP  +VR+R+Q Q            +V   +++  KEG  G
Sbjct:  210 TSTAPLDRLKVMMQVHGSKS--------MNIFGGFRQMVKEGGIRSLWRGNGTNVIKIAPETAVKFWAYEQYKKLLTEEG---QKLGTFERFISGSMAGATAQTFIYPMEVLKTRLAV----AKTGQYSGIYGCAKKILKHEGFGAFYKGYIPNLLGIIPYAGIDLAVYELLKSYWL--DNFAKDSVNPGVMVLLSCGALSSTCGQLASYPLALVRTRMQAQATVE--GAPQLSMVGLFQRIVSKEGVSG 440          
BLAST of CV887202 vs. ExPASy Swiss-Prot
Match: MCFL_DICDI (Mitochondrial substrate carrier family protein L OS=Dictyostelium discoideum GN=mcfL PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 8.186e-15
Identity = 61/243 (25.10%), Postives = 107/243 (44.03%), Query Frame = 2
Query:  149 PLDVIKTRLQVHGLPEGTHXXXXXXXXXXXLQNILKNEGLKGLYRGLSPTLLALLPNWAVYFAVYERLKGLLRTHGDGNSQLSVGKNMXXXXXXXXXXXXXXNPLWVVKTRLQTQGMRSNVVPYKSILSALRRISHEEGMRGLYSGILPSLAGVSHVAIQFPAYERIKHYMAKKDDTDVDKLNPGSVMIASSIAKVLASVMTYPHEVVRSRLQEQGQNRKVDVQYAGVVDCVKKVFQKEGFPG 877
            P D +K RLQ  G                     +K EG   LY+G++P LL +    +  F     +K   + H D ++ +S+G+ M               P+  VK++LQ Q   + V  Y   +  +++I    G+RGLY  ++P+    + +   F  YE  + Y+ ++D +    +  G   IA  IA     +  +P +V+RSR+     N     +Y G++DC K +++ +G  G
Sbjct:   30 PFDTLKVRLQTEG------STGRFRGLAHCFTTTIKEEGFFALYKGVTPPLLGMSIINSCMFGAMNIVKS--KIHTDKSTPISLGEIMVSGAITGWIVSFVACPIETVKSKLQVQ--YTGVKLYNGPIDCIKKI----GIRGLYKALIPTGFQRNSLYAYFGCYELAQRYLRREDGS----MTMGRSFIAGGIAGTGFWLTNFPFDVIRSRIMTMPYNES-PPRYKGMIDCAKHIYRVDGLKG 253          
BLAST of CV887202 vs. ExPASy Swiss-Prot
Match: PM47B_CANBO (Peroxisomal membrane protein PMP47B OS=Candida boidinii GN=PMP47B PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 1.069e-14
Identity = 52/193 (26.94%), Postives = 91/193 (47.15%), Query Frame = 2
Query:  239 LQNILKNEGLKGLYRGLSPTLLALLPNWAVYFAVYERLKGLLRTHGDGNSQ-----------LSVGKNMXXXXXXXXXXXXXXNPLWVVKTRLQTQGMRSNVVPYKSILSALRRISHEEGMRGLYSGILPSLAGVSHVAIQFPAYERIKHYMAKKDDTDVDKLNPGSVMIASSIAKVLASVMTYPHEVVRSRL 784
            L+ ILK++G KGLY GL   L  +     VY+  YE     L    +  +            LSV ++M              NP+WV  TR+         +   + + A+  I   EG + L++GI+P+L  V +  IQ+  +E++K ++ K    +V    P   ++  +  K++A+++TYP+  +RSR+
Sbjct:   80 LKKILKDQGAKGLYNGLESALFGIAVTNFVYYYFYELTGKTLSRRSNPQTTSGSKKVTLKKGLSVWQSMAAGAVAGTISRVATNPIWVANTRMTILSKNQGKLGKLNTIEAIIYILKNEGWQKLFTGIVPALFLVLNPIIQYTIFEQLKSFIVKIKKRNV---TPVDALLLGAFGKLIATIITYPYITLRSRM 269          
BLAST of CV887202 vs. ExPASy Swiss-Prot
Match: SCM1B_XENLA (Calcium-binding mitochondrial carrier protein SCaMC-1-B OS=Xenopus laevis GN=slc25a24-B PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.396e-14
Identity = 66/253 (26.09%), Postives = 109/253 (43.08%), Query Frame = 2
Query:  137 TFMCPLDVIKTRLQVHGLPEGTHXXXXXXXXXXXLQNILKNEGLKGLYRGLSPTLLALLPNWAVYFAVYERLKGLLRTHGDGNSQLSVGKNMXXXXXXXXXXXXXXNPLWVVKTRLQTQGMRSNVVPYKSILSALRRISHEEGMRGLYSGILPSLAG-VSHVAIQFPAYERIKHYMAKKDDTDVDKLNPGSVMI-----ASSIAKVLASVMTYPHEVVRSRLQEQGQNRKVDVQYAGVVDCVKKVFQKEGFPG 877
            T   PLD +K  +QVHG    ++           L+ ++K  G++ L+RG    ++ + P  A+ F  YE+ K L  +    + +L   +                 P+ V+KTRL           Y  +    ++I  +EG+R  Y G +P++ G + +  I    YE +K+Y  +      D  NPG +++     ASS    LAS   YP  ++R+R+Q Q           G     +K+  KEGF G
Sbjct:  210 TGTAPLDRLKVMMQVHGSKGNSNIITG-------LKQMVKEGGIRSLWRGNGVNVIKIAPETAMKFWAYEQYKKLFTSE---SGKLGTAERFVAGSLAGATAQTSIYPMEVLKTRLAV----GRTGQYSGMFDCAKKIMQKEGIRAFYKGYIPNILGIIPYAGIDLAIYETLKNYWLQNHAK--DSANPGVLVLLGCGTASSTCGQLAS---YPLALIRTRMQAQASIEGAPQLNMG--GLFRKIVAKEGFLG 441          
BLAST of CV887202 vs. ExPASy Swiss-Prot
Match: EAAC_ARATH (Probable envelope ADP,ATP carrier protein, chloroplastic OS=Arabidopsis thaliana GN=EAAC PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.396e-14
Identity = 61/236 (25.85%), Postives = 108/236 (45.76%), Query Frame = 2
Query:  137 TFMCPLDVIKTRLQVHGLPEGTHXXXXXXXXXXXLQNILKNEGLKGLYRGLSPTLLALLPNWAVYFAVYERLKGLLRTHGDGNSQLSVGKNMXXXXXXXXXXXXXXNPLWVVKTRLQTQGMRSNVVPYKSILSALRRISHEEGMRGLYSGILPSLAGVS-HVAIQFPAYERIKHYMAKKDDTDVDKLNPGSVMIASSIAKVLASVMTYPHEVVRSRLQEQGQNRK-VDVQYAGVVD 838
            T   PLD IK  +Q HG+  G             +  I K EG+KG ++G  P ++ +LP  AV    YE  K L +   D   QLSV   +               PL V++ RL  +        Y+++      +  +EG+   Y G+ PSL G++ ++A+ F  ++     + KK   +  +    S ++ + ++  +A++  YP + VR ++Q +G   K +   +AG++D
Sbjct:  103 TVTAPLDRIKLLMQTHGIRLGQQSAKKAIGFIEAITLIAKEEGVKGYWKGNLPQVIRVLPYSAVQLLAYESYKNLFKGKDD---QLSVIGRLAAGACAGMTSTLLTYPLDVLRLRLAVEPR------YRTMSQVALSMLRDEGIASFYYGLGPSLVGIAPYIAVNFCIFD-----LVKKSLPEEYRKKAQSSLLTAVLSAGIATLTCYPLDTVRRQMQMRGTPYKSIPEAFAGIID 324          
BLAST of CV887202 vs. ExPASy Swiss-Prot
Match: UCPA_DICDI (Mitochondrial substrate carrier family protein ucpA OS=Dictyostelium discoideum GN=ucpA PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.382e-14
Identity = 66/245 (26.94%), Postives = 105/245 (42.86%), Query Frame = 2
Query:  149 PLDVIKTRLQVHGLPEGTHXXXXXXXXXXXLQNILKNEGLKGLYRGLSPTLLALLPNWAVYFAVYERLKGLLRTHGDGNSQLSVGKNMXXXXXXXXXXXXXXNPLWVVKTRLQTQGMRSN---VVPYKSILSALRRISHEEGMRGLYSGILPSLAGVS-HVAIQFPAYERIKHYMAKKDDTDVDKLNPGSVMIASSIAKVLASVMTYPHEVVRSRLQEQGQNRKVDVQYAGVVDCVKKVFQKEGF 871
            P++++KTRLQ+ G  E               + I K EG++GL  GL P   +      +    ++ +   L      N      KN+              +P  +VK R+Q   M  N    V Y S  +A ++I  +EG +GL  G+L S    +   AIQ   Y   K+ +    D  +      + +I+S +A  + +    P +V R+RL  QG+       Y G++DCV K  +KEGF
Sbjct:   35 PIELVKTRLQLQG--ELQLSQRIYNGVWDAFKQIYKTEGIRGLQSGLIPAYFSQATMQGIRLGSFDLISNALGAKP--NQDYFFLKNLLAGATAGAIGAAAGSPFDLVKVRMQAANMYKNDPQFVGYSSSFAAFKQIIQKEGFKGLTRGMLTSAQRTAVGSAIQLSTYGSCKNLVLNFVDDGIY-----AYIISSMVAGFIVTFGMNPFDVARTRLYFQGKGNSHGEIYKGLMDCVYKTVKKEGF 270          
BLAST of CV887202 vs. ExPASy Swiss-Prot
Match: TAAC_ARATH (Thylakoid ADP,ATP carrier protein, chloroplastic OS=Arabidopsis thaliana GN=TAAC PE=1 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.382e-14
Identity = 62/244 (25.41%), Postives = 107/244 (43.85%), Query Frame = 2
Query:  149 PLDVIKTRLQVHGLPEGTHXXXXXXXXXXXLQNILKNEGLKGLYRGLSPTLLALLPNWAVYFAVYERLKGLLRTHGDGNSQLSVGKNMXXXXXXXXXXXXXXNPLWVVKTRLQTQGMRSNVVPYKSILSALRRISHEEGMRGLYSGILPSLAGVS-HVAIQFPAYERIKHYMAKKDDTDVDKLNPGSVMIASSIAKVLASVMTYPHEVVRSRLQEQGQNRKVDVQYAGVVDCVKKVFQKEGFPG 877
            PLD IK  +Q HG+  G             +  I K EG+KG ++G  P ++ ++P  AV    YE  K L R     + QLSV   +               PL V++ RL  +        Y+++      +  EEG+   Y+G+ PSL  ++ ++AI F  ++ +K  + +K           S ++ + +A  +A+   YP + +R ++Q +G        Y  V+D    +  +EG  G
Sbjct:  135 PLDRIKLLMQTHGVRAGQQSAKKAIGFIEAITLIGKEEGIKGYWKGNLPQVIRIVPYSAVQLFAYETYKKLFR---GKDGQLSVLGRLGAGACAGMTSTLITYPLDVLRLRLAVE------PGYRTMSQVALNMLREEGVASFYNGLGPSLLSIAPYIAINFCVFDLVKKSLPEKYQQKTQ-----SSLLTAVVAAAIATGTCYPLDTIRRQMQLKG------TPYKSVLDAFSGIIAREGVVG 358          
BLAST of CV887202 vs. ExPASy Swiss-Prot
Match: M2OM_DICDI (Probable mitochondrial 2-oxoglutarate/malate carrier protein OS=Dictyostelium discoideum GN=ucpC PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.382e-14
Identity = 69/254 (27.17%), Postives = 112/254 (44.09%), Query Frame = 2
Query:  140 FMCPLDVIKTRLQVHGLPEGTHXXXXXXXXXXXLQNILKNEGLKGLYRGLSPTLLALLPNWAVYFAVYERLKGLLRTHGDGNSQLSVGKNMXXXXXXXXXXXXXXNPLWVVKTRLQTQG-----MRSNVVPYKSILSALRRISHEEGMRGLYSGILPSLAGVSHV-AIQFPAYERIKHYMAKK----DDTDVDKLNPGSVMIASSIAKVLASVMTYPHEVVRSRLQEQGQNRKVDVQYAGVVDCVKKVFQKEGF 871
            F  P+D +K R+Q+ G  EGT            L +I + EG   LY+GLS +LL         F +Y+ +K ++      +  L   + +               P  +   R+Q  G     +R N   YK++   + RIS EEG+  L+ G  P+L     + A Q  +Y++ K  M       DD           +IAS+ A  +A+V T P +V+++R+    +    ++QY G  DC+ K  + EGF
Sbjct:   41 FTHPIDSLKVRMQLQG--EGT-GVGPKRGALKMLVHINQTEGFFTLYKGLSASLLRQATYTTTRFGLYDLIKDIV---AKDDKPLPFTQKIMVGMLSGAGGAIVGTPADLTMVRMQADGKLPFNLRRN---YKNVFDGIFRISKEEGIISLWKGCSPNLIRAMFMTAGQVSSYDQTKQLMLASGYFHDDIKTH-------LIASTTAAFVAAVATSPLDVIKTRIMNSPKTVTGELQYKGTFDCLSKTLRAEGF 278          
The following BLAST results are available for this feature:
BLAST of CV887202 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 148
Match NameE-valueIdentityDescription
PM47A_CANBO6.268e-1527.46Peroxisomal membrane protein PMP47A OS=Candida boi... [more]
BT1_MAIZE6.268e-1527.60Protein brittle-1, chloroplastic/amyloplastic OS=Z... [more]
SCMC1_MOUSE8.186e-1525.60Calcium-binding mitochondrial carrier protein SCaM... [more]
MCFL_DICDI8.186e-1525.10Mitochondrial substrate carrier family protein L O... [more]
PM47B_CANBO1.069e-1426.94Peroxisomal membrane protein PMP47B OS=Candida boi... [more]
SCM1B_XENLA1.396e-1426.09Calcium-binding mitochondrial carrier protein SCaM... [more]
EAAC_ARATH1.396e-1425.85Probable envelope ADP,ATP carrier protein, chlorop... [more]
UCPA_DICDI2.382e-1426.94Mitochondrial substrate carrier family protein ucp... [more]
TAAC_ARATH2.382e-1425.41Thylakoid ADP,ATP carrier protein, chloroplastic O... [more]
M2OM_DICDI2.382e-1427.17Probable mitochondrial 2-oxoglutarate/malate carri... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_029H01_T3 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_029_T3_H01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV887202 ID=CV887202; Name=CV887202; organism=Citrus sinensis; type=EST; length=879bp
CTCTTTCGAAATTGTAGAAGACATGGTGAGTGAAAAAGGAGGTGGAGACG
CCGATGGAGAATCTTTACAAGCTCTAACACGCAGGGTCTTACTTTCCCAC
GCGGCAGCTGGAGCTGCTGCTGGTGCAATTGCGGCAACATTTATGTGCCC
GTTGGATGTGATCAAGACAAGGTTACAGGTACATGGCCTTCCCGAAGGCA
CTCACTCTGGACGCAGAGGTAGTATCATTATAATAAGTTTACAGAACATA
TTGAAGAATGAAGGTCTGAAGGGATTGTATCGTGGTCTTTCACCGACATT
ACTAGCATTACTTCCAAATTGGGCTGTATACTTCGCAGTTTATGAGCGAT
TAAAAGGTCTTCTCCGAACACATGGGGATGGCAATAGTCAACTCTCAGTT
GGGAAAAATATGATAGCTGCAGCTGGTGCTGGGGCTGCTACAGCCATCAC
AACTAATCCACTGTGGGTTGTGAAGACCAGACTCCAAACTCAGGGAATGA
GATCAAATGTGGTTCCCTACAAAAGCATACTTTCTGCTCTGAGAAGGATT
TCTCATGAAGAAGGCATGCGAGGGTTATATAGTGGCATTCTGCCTTCGTT
GGCCGGAGTTAGTCATGTTGCTATTCAGTTTCCTGCATATGAGAGAATCA
AGCATTACATGGCCAAAAAGGATGACACAGATGTTGATAAGCTAAATCCT
GGAAGTGTTATGATTGCTTCTTCAATAGCAAAAGTACTTGCCTCTGTAAT
GACTTACCCACATGAGGTTGTACGTTCAAGGCTTCAAGAGCAAGGGCAGA
ACAGAAAGGTTGATGTACAATATGCAGGCGTTGTTGATTGTGTCAAGAAG
GTATTCCAAAAGGAAGGTTTCCCTGGCTT
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