CV887194
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV887194 vs. ExPASy Swiss-Prot
Match: FBP24_PETHY (MADS-box protein FBP24 OS=Petunia hybrida GN=FBP24 PE=1 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 5.620e-26 Identity = 61/162 (37.65%), Postives = 99/162 (61.11%), Query Frame = 2 Query: 95 MGRGKIEIKRIENPTNRQVTYSKRRNGIFKKAQELTVLCDAKVSLIMFSNTGKFHEYISPTTTTKKMFDQYQKSLGVDL-WSTHYAKMQESYRKLKEINNKLRKDIRQRMGEDLDDLTFEELRGLEQNMSSSAATVRERKFHVIKTQTDTYKKKVRNLEERH 577 MGRGKIE+KRIEN T+RQVT+SKRR G+ KK EL+VLCDA++ LI+FS+ GK EY S + ++ +Y ++ G L + ++ + K++ L+ +++ G+DL +EEL LE+ + + +R RK +++ Q + KK + LE+ + Sbjct: 4 MGRGKIEVKRIENKTSRQVTFSKRRAGLLKKTHELSVLCDAQIGLIIFSSKGKLFEYCSQPHSMSQIISRYLQTTGASLPVEDNRVQLYDEVAKMRRDTLNLQLSLQRYKGDDLSLAQYEELNELEKQLEHALNKIRARKLELMQQQMENLKKTEKMLEKEN 165
BLAST of CV887194 vs. ExPASy Swiss-Prot
Match: MADS8_ORYSJ (MADS-box transcription factor 8 OS=Oryza sativa subsp. japonica GN=MADS8 PE=1 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 7.340e-26 Identity = 90/240 (37.50%), Postives = 127/240 (52.92%), Query Frame = 2 Query: 95 MGRGKIEIKRIENPTNRQVTYSKRRNGIFKKAQELTVLCDAKVSLIMFSNTGKFHEYISPTTTTKKMFDQYQK-SLG---VDLWSTHYAKMQES---YRKLKEINNKLRKDIRQRMGEDLDDLTFEELRGLEQNMSSSAATVRE-RKFHVIKTQTDTYKKKV----------RNLEE---------RHGNILLDFE------TKYDDPHYGLVDNGDYQSAMALANGASNLYAFRMQQQN 715 MGRG++E+KRIEN NRQVT++KRRNG+ KKA EL+VLCDA+V+LI+FSN GK +E+ S + T+ + ++YQK S G + + +Q S Y KLK L++ R +GEDL L +EL LE+ + SS +R R H++ TD +++ R LEE HG LL +E + PH G NG + S A A + F +Q N Sbjct: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSGQSMTRTL-ERYQKFSYGGPDTAIQNKENELVQSSRNEYLKLKARVENLQRTQRNLLGEDLGTLGIKELEQLEKQLDSSLRHIRSTRTQHMLDQLTDLQRREQMLCEANKCLRRKLEESNQLHGQVWEHGATLLGYERQSPHAVQQVPPHGG---NGFFHSLEAAAEPTLQI-GFTPEQMN 235
BLAST of CV887194 vs. ExPASy Swiss-Prot
Match: AGL15_ARATH (Agamous-like MADS-box protein AGL15 OS=Arabidopsis thaliana GN=AGL15 PE=1 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 7.340e-26 Identity = 71/161 (44.10%), Postives = 103/161 (63.98%), Query Frame = 2 Query: 95 MGRGKIEIKRIENPTNRQVTYSKRRNGIFKKAQELTVLCDAKVSLIMFSNTGKFHEYISPTTTTKKMFDQYQKSLGVDLWSTHYAKMQESYRK---LKEINNKLRKDIRQRMGEDLDDLTFEELRGLEQNMSSSAATVRERKFHVIKTQTDTYKKKVRNLE 568 MGRGKIEIKRIEN +RQVT+SKRR+G+ KKA+EL+VLCDA+V++I+FS +GK EY S T K+ +Y S+ +K +E + LK+ +KL++ Q G+ L+ LTF+EL+ LEQ + + TVRERK ++ Q + + K + E Sbjct: 1 MGRGKIEIKRIENANSRQVTFSKRRSGLLKKARELSVLCDAEVAVIVFSKSGKLFEYSS--TGMKQTLSRYGNH-----QSSSASKAEEDCAEVDILKDQLSKLQEKHLQLQGKGLNPLTFKELQSLEQQLYHALITVRERKERLLTNQLEESRLKEQRAE 154
BLAST of CV887194 vs. ExPASy Swiss-Prot
Match: AG_ARATH (Floral homeotic protein AGAMOUS OS=Arabidopsis thaliana GN=AG PE=1 SV=2) HSP 1 Score: 117.087 bits (292), Expect = 1.252e-25 Identity = 78/229 (34.06%), Postives = 126/229 (55.02%), Query Frame = 2 Query: 98 GRGKIEIKRIENPTNRQVTYSKRRNGIFKKAQELTVLCDAKVSLIMFSNTGKFHEYISPTTTTKKMFDQYQKSLGVDLWSTHYAKMQESY-----RKLKEINNKLRKDIRQRMGEDLDDLTFEELRGLEQNMSSSAATVRERKFHVIKTQTDTYKKKVRNLEERHGNILLD---FETKYDDPHYGLVDNG-DYQSAMALANGASNLYAFR-------MQQQNLHQGTGG 736 GRGKIEIKRIEN TNRQVT+ KRRNG+ KKA EL+VLCDA+V+LI+FS+ G+ +EY + K ++Y+K++ + + A++ Y KL++ ++ RQ MGE + ++ +ELR LE + S +R +K ++ ++ D +K R ++ + N +L E + ++P L+ G +Y+ M S + R +Q N H + G Sbjct: 18 GRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEY--SNNSVKGTIERYKKAISDNSNTGSVAEINAQYYQQESAKLRQQIISIQNSNRQLMGETIGSMSPKELRNLEGRLERSITRIRSKKNELLFSEIDYMQK--REVDLHNDNQILRAKIAENERNNPSISLMPGGSNYEQLMPPPQTQSQPFDSRNYFQVAALQPNNHHYSSAG 242
BLAST of CV887194 vs. ExPASy Swiss-Prot
Match: MTF1_PEA (MADS-box transcription factor 1 OS=Pisum sativum GN=MTF1 PE=2 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.635e-25 Identity = 68/167 (40.72%), Postives = 101/167 (60.48%), Query Frame = 2 Query: 95 MGRGKIEIKRIENPTNRQVTYSKRRNGIFKKAQELTVLCDAKVSLIMFSNTGKFHEYISPTTTTKKMFDQYQK--------------SLGVDLWSTHYAKMQESYRKLKEINNKLRKDIRQRMGEDLDDLTFEELRGLEQNMSSSAATVRERKFHVIKTQTDTYKKK 553 MGRG++E+KR+EN NRQVT++KRRNG+ KKA EL+VLCDA+V+LI+FSN GK +E+ S T++ K ++YQK +L ++L S Q+ Y KLK L++ R MGEDL L+ ++L LE+ + SS +R + + Q ++K Sbjct: 1 MGRGRVELKRVENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIVFSNRGKLYEFCS-TSSMLKTLERYQKCNYGAPEGNVTSKEALVLELSS------QQEYLKLKARYESLQRSQRNLMGEDLGPLSSKDLETLERQLDSSLKQIRSTRTQFMLDQLGDLQRK 160
BLAST of CV887194 vs. ExPASy Swiss-Prot
Match: CAL_ARATH (Transcription factor CAULIFLOWER OS=Arabidopsis thaliana GN=CAL PE=1 SV=3) HSP 1 Score: 116.701 bits (291), Expect = 1.635e-25 Identity = 61/168 (36.31%), Postives = 103/168 (61.31%), Query Frame = 2 Query: 95 MGRGKIEIKRIENPTNRQVTYSKRRNGIFKKAQELTVLCDAKVSLIMFSNTGKFHEYISPTTTTKKMFDQYQK-------SLGVDLWSTHYAKMQESYRKLKEINNKLRKDIRQRMGEDLDDLTFEELRGLEQNMSSSAATVRERKFHVIKTQTDTYKKKVRNLEERH 577 MGRG++E+KRIEN NRQVT+SKRR G+ KKAQE++VLCDA+VSLI+FS+ GK EY S + +K+ ++Y++ + D Y +LK L ++ R +GE+L+ ++ ++L+ LEQ + ++ +R RK ++ + ++K + ++E + Sbjct: 1 MGRGRVELKRIENKINRQVTFSKRRTGLLKKAQEISVLCDAEVSLIVFSHKGKLFEY-SSESCMEKVLERYERYSYAERQLIAPDSHVNAQTNWSMEYSRLKAKIELLERNQRHYLGEELEPMSLKDLQNLEQQLETALKHIRSRKNQLMNESLNHLQRKEKEIQEEN 167
BLAST of CV887194 vs. ExPASy Swiss-Prot
Match: AG_BRANA (Floral homeotic protein AGAMOUS OS=Brassica napus GN=AG1 PE=2 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 2.136e-25 Identity = 73/197 (37.06%), Postives = 116/197 (58.88%), Query Frame = 2 Query: 98 GRGKIEIKRIENPTNRQVTYSKRRNGIFKKAQELTVLCDAKVSLIMFSNTGKFHEYISPTTTTKKMFDQYQKSLGVDLWSTHYAKMQESY-----RKLKEINNKLRKDIRQRMGEDLDDLTFEELRGLEQNMSSSAATVRERKFHVIKTQTDTYKKKVRNLEERHGNILLD---FETKYDDPHYGLVDNG-DYQSAM 661 GRGKIEIKRIEN TNRQVT+ KRRNG+ KKA EL+VLCDA+V+LI+FS+ G+ +EY + K ++Y+K++ + + A++ Y KL++ ++ RQ MGE + ++ +ELR LE + S +R +K ++ + D +K R ++ + N LL E + ++P L+ G +Y+ M Sbjct: 18 GRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEY--SNNSVKGTIERYKKAISDNSNTGSVAEINAQYYQQESAKLRQQIISIQNSNRQLMGETIGSMSPKELRNLEGRLDRSVNRIRSKKNELLFAEIDYMQK--REVDLHNDNQLLRAKIAENERNNPSMSLMPGGSNYEQIM 210
BLAST of CV887194 vs. ExPASy Swiss-Prot
Match: MAD57_ORYSJ (MADS-box transcription factor 57 OS=Oryza sativa subsp. japonica GN=MADS57 PE=2 SV=2) HSP 1 Score: 115.931 bits (289), Expect = 2.789e-25 Identity = 63/158 (39.87%), Postives = 101/158 (63.92%), Query Frame = 2 Query: 95 MGRGKIEIKRIENPTNRQVTYSKRRNGIFKKAQELTVLCDAKVSLIMFSNTGKFHEYISPTTTTKKMFDQY----QKSLG------VDLWSTHYAKMQESYRKLKEINNKLRKDIRQRMGEDLDDLTFEELRGLEQNMSSSAATVRERKFHVIKTQTD 538 MGRGKI I+RI+N T+RQVT+SKRRNG+ KKA+EL++LCDA+V L++FS+TG+ +E+ S T K + D+Y ++ LG + +W A +++ L+E + +Q MGE+L L +L+GLE + S +R RK +++K++ + Sbjct: 1 MGRGKIVIRRIDNSTSRQVTFSKRRNGLLKKAKELSILCDAEVGLVVFSSTGRLYEFSS--TNMKTVIDRYTNAKEELLGGNATSEIKIWQREAASLRQQLHNLQESH-------KQLMGEELSGLGVRDLQGLENRLEISLRNIRMRKDNLLKSEIE 149
BLAST of CV887194 vs. ExPASy Swiss-Prot
Match: AGL8_SOLLC (Agamous-like MADS-box protein AGL8 homolog OS=Solanum lycopersicum GN=TDR4 PE=2 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 2.789e-25 Identity = 65/169 (38.46%), Postives = 104/169 (61.54%), Query Frame = 2 Query: 95 MGRGKIEIKRIENPTNRQVTYSKRRNGIFKKAQELTVLCDAKVSLIMFSNTGKFHEYISPTTTTK--KMFDQY---QKSLGVDLWSTHYAKMQESYRKLKEINNKLRKDIRQRMGEDLDDLTFEELRGLEQNMSSSAATVRERKFHVIKTQTDTYKKKVRNLEERHGNI 586 MGRG++++KRIEN NRQVT+SKRR+G+ KKA E++VLCDA+V LI+FS GK EY + + + + +++Y +K L V T +RKLK L+++ + +GEDL+ L+ +EL+ LE + S+ +R RK ++ +KK R L+E++ + Sbjct: 1 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVGLIVFSTKGKLFEYANDSCMERILERYERYSFAEKQL-VPTDHTSPVSWTLEHRKLKARLEVLQRNQKHYVGEDLESLSMKELQNLEHQLDSALKHIRSRKNQLMHESISVLQKKDRALQEQNNQL 168
BLAST of CV887194 vs. ExPASy Swiss-Prot
Match: AGL1_ARATH (Agamous-like MADS-box protein AGL1 OS=Arabidopsis thaliana GN=AGL1 PE=1 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 2.789e-25 Identity = 67/173 (38.73%), Postives = 104/173 (60.12%), Query Frame = 2 Query: 95 MGRGKIEIKRIENPTNRQVTYSKRRNGIFKKAQELTVLCDAKVSLIMFSNTGKFHEYISPTTTTKKMFDQYQKSL-------GVDLWSTHYAKMQESYRKLKEINNKLRKDIRQRMGEDLDDLTFEELRGLEQNMSSSAATVRERKFHVIKTQTDTYKKKVRNLEERHGNILL 592 +GRGKIEIKRIEN TNRQVT+ KRRNG+ KKA EL+VLCDA+V+L++FS G+ +EY + + + ++Y+K+ V +T Y + + S KL+ ++ R +GE L L F+EL+ LE + + VR +K ++ + + +K R +E +H N+ L Sbjct: 16 LGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVIFSTRGRLYEYAN--NSVRGTIERYKKACSDAVNPPSVTEANTQYYQQEAS--KLRRQIRDIQNSNRHIVGESLGSLNFKELKNLEGRLEKGISRVRSKKNELLVAEIEYMQK--REMELQHNNMYL 182 The following BLAST results are available for this feature:
BLAST of CV887194 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 117
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CV887194 ID=CV887194; Name=CV887194; organism=Citrus sinensis; type=EST; length=837bpback to top |