CV887194
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV887194 vs. ExPASy Swiss-Prot
Match: AGL13_ARATH (Agamous-like MADS-box protein AGL13 OS=Arabidopsis thaliana GN=AGL13 PE=2 SV=2) HSP 1 Score: 111.694 bits (278), Expect = 5.260e-24 Identity = 65/171 (38.01%), Postives = 101/171 (59.06%), Query Frame = 2 Query: 95 MGRGKIEIKRIENPTNRQVTYSKRRNGIFKKAQELTVLCDAKVSLIMFSNTGKFHEY--ISPTTTTKKMFDQYQKSLGVDLWSTHYAKMQESYRKLKEINNKLRKDIRQRMGEDLDDLTFEELRGLEQNMSSSAATVRERKFHVIKTQTDTYKKKVRNLEERHGNILLDFE 601 MGRGK+E+KRIEN RQVT+SKR++G+ KKA EL+VLCDA+VSLI+FS GK +E+ + T ++ + L D QE KLK L + R +GEDL+ ++ +EL+ LE+ + + + R++K V+ Q + ++K R L + + + L+ E Sbjct: 1 MGRGKVEVKRIENKITRQVTFSKRKSGLLKKAYELSVLCDAEVSLIIFSTGGKLYEFSNVGVGRTIERYYRCKDNLLDNDTLEDTQGLRQE-VTKLKCKYESLLRTHRNLVGEDLEGMSIKELQTLERQLEGALSATRKQKTQVMMEQMEELRRKERELGDINNKLKLETE 170
BLAST of CV887194 vs. ExPASy Swiss-Prot
Match: MAD18_ORYSJ (MADS-box transcription factor 18 OS=Oryza sativa subsp. japonica GN=MADS18 PE=1 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 6.870e-24 Identity = 64/176 (36.36%), Postives = 105/176 (59.66%), Query Frame = 2 Query: 95 MGRGKIEIKRIENPTNRQVTYSKRRNGIFKKAQELTVLCDAKVSLIMFSNTGKFHEYISPTTTTKKMFDQYQK-----SLGVDLWSTHYAKMQESYRKLKEINNKLRKDIRQRMGEDLDDLTFEELRGLEQNMSSSAATVRERKFHVIKTQTDTYKKKVRNLEERHGNILLDFETK 607 MGRG ++++RIEN NRQVT+SKRRNG+ KKA E++VLCDA V+LI+FS GK +E+ S ++ + + ++YQ+ ++ + + Y LK + L+K RQ +GE LD LT +EL+ LE + S +R +K ++ +KK ++L+ ++ + ET+ Sbjct: 1 MGRGPVQLRRIENKINRQVTFSKRRNGLLKKAHEISVLCDADVALIVFSTKGKLYEF-SSHSSMEGILERYQRYSFDERAVLEPNTEDQENWGDEYGILKSKLDALQKSQRQLLGEQLDTLTIKELQQLEHQLEYSLKHIRSKKNQLLFESISELQKKEKSLKNQNNVLQKLMETE 175
BLAST of CV887194 vs. ExPASy Swiss-Prot
Match: MAD18_ORYSI (MADS-box transcription factor 18 OS=Oryza sativa subsp. indica GN=MADS18 PE=2 SV=2) HSP 1 Score: 111.309 bits (277), Expect = 6.870e-24 Identity = 64/176 (36.36%), Postives = 105/176 (59.66%), Query Frame = 2 Query: 95 MGRGKIEIKRIENPTNRQVTYSKRRNGIFKKAQELTVLCDAKVSLIMFSNTGKFHEYISPTTTTKKMFDQYQK-----SLGVDLWSTHYAKMQESYRKLKEINNKLRKDIRQRMGEDLDDLTFEELRGLEQNMSSSAATVRERKFHVIKTQTDTYKKKVRNLEERHGNILLDFETK 607 MGRG ++++RIEN NRQVT+SKRRNG+ KKA E++VLCDA V+LI+FS GK +E+ S ++ + + ++YQ+ ++ + + Y LK + L+K RQ +GE LD LT +EL+ LE + S +R +K ++ +KK ++L+ ++ + ET+ Sbjct: 1 MGRGPVQLRRIENKINRQVTFSKRRNGLLKKAHEISVLCDADVALIVFSTKGKLYEF-SSHSSMEGILERYQRYSFDERAVLEPNTEDQENWGDEYGILKSKLDALQKSQRQLLGEQLDTLTIKELQQLEHQLEYSLKHIRSKKNQLLFESISELQKKEKSLKNQNNVLQKLMETE 175
BLAST of CV887194 vs. ExPASy Swiss-Prot
Match: AG_PETHY (Floral homeotic protein AGAMOUS OS=Petunia hybrida GN=AG1 PE=2 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 6.870e-24 Identity = 63/166 (37.95%), Postives = 97/166 (58.43%), Query Frame = 2 Query: 95 MGRGKIEIKRIENPTNRQVTYSKRRNGIFKKAQELTVLCDAKVSLIMFSNTGKFHEYISPTTTTKKMFDQYQKSLGVDLWSTHYAKMQESY-----RKLKEINNKLRKDIRQRMGEDLDDLTFEELRGLEQNMSSSAATVRERKFHVIKTQTDTYKKKVRNLEERH 577 +GRGKIEIKRIEN TNRQVT+ KRRNG+ KKA EL+VLCDA+V+LI+FS+ G+ +EY + + K ++Y+K+ + A+ Y KL+ L+ R +GE L L +LR LEQ + + +R +K ++ + + +K+ +L + Sbjct: 17 LGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYAN--NSVKATIERYKKACSDSSNTGSIAEANAQYYQQEASKLRAQIGNLQNQNRNFLGESLAALNLRDLRNLEQKIEKGISKIRAKKNELLFAEIEYMQKREIDLHNNN 180
BLAST of CV887194 vs. ExPASy Swiss-Prot
Match: AG_TOBAC (Floral homeotic protein AGAMOUS OS=Nicotiana tabacum GN=AG1 PE=2 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 8.973e-24 Identity = 61/166 (36.75%), Postives = 98/166 (59.04%), Query Frame = 2 Query: 95 MGRGKIEIKRIENPTNRQVTYSKRRNGIFKKAQELTVLCDAKVSLIMFSNTGKFHEYISPTTTTKKMFDQYQKSLG-----VDLWSTHYAKMQESYRKLKEINNKLRKDIRQRMGEDLDDLTFEELRGLEQNMSSSAATVRERKFHVIKTQTDTYKKKVRNLEERH 577 +GRGKIEIKRIEN TNRQVT+ KRRNG+ KKA EL+VLCDA+V+LI+FS+ G+ +EY + + K ++Y+K+ + + Q+ KL+ L+ R +GE L L+ +L+ LEQ + + +R +K ++ + + +K+ +L + Sbjct: 17 LGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYAN--NSVKATIERYKKACSDSSNTGSISEANAQYYQQEASKLRAQIGNLQNQNRNMLGESLAALSLRDLKNLEQKIEKGISKIRSKKNELLFAEIEYMQKREIDLHNNN 180
BLAST of CV887194 vs. ExPASy Swiss-Prot
Match: AGL8_SOLTU (Agamous-like MADS-box protein AGL8 homolog OS=Solanum tuberosum PE=2 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 8.973e-24 Identity = 61/169 (36.09%), Postives = 101/169 (59.76%), Query Frame = 2 Query: 95 MGRGKIEIKRIENPTNRQVTYSKRRNGIFKKAQELTVLCDAKVSLIMFSNTGKFHEYISPTTTTKKMFDQYQK-----SLGVDLWSTHYAKMQESYRKLKEINNKLRKDIRQRMGEDLDDLTFEELRGLEQNMSSSAATVRERKFHVIKTQTDTYKKKVRNLEERHGNI 586 MGRG++++KRIEN NRQVT+SKRR+G+ KKA E++VLCDA+V LI+FS GK EY + + +++ ++Y++ V T + KLK L+++ + +GEDL+ L +EL+ LE + S+ +R RK ++ +K+ R L+E++ + Sbjct: 1 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVGLIVFSTKGKLFEYAN-DSCMERLLERYERYSFAERQLVPTDHTSPGSWTLEHAKLKARLEVLQRNQKHYVGEDLESLNMKELQNLEHQLDSALKHIRSRKNQLMHESISVLQKQDRALQEQNNQL 168
BLAST of CV887194 vs. ExPASy Swiss-Prot
Match: MAD32_ORYSJ (MADS-box transcription factor 32 OS=Oryza sativa subsp. japonica GN=MADS32 PE=2 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 1.172e-23 Identity = 61/164 (37.20%), Postives = 97/164 (59.15%), Query Frame = 2 Query: 95 MGRGKIEIKRIENPTNRQVTYSKRRNGIFKKAQELTVLCDAKVSLIMFSNTGKFHEYISPTTTTKKMF-DQYQKSLGVDLWSTHYAKMQESYRKLKEINNKLRKDIRQRMGEDLDDLTFEELRGLEQNMSSSAATVRERKFHVIKTQTDTYKKKVR-NLEERHG 580 MGRG+ EIKRIENPT RQ T+ KRR+G+FKKA+EL VLCDA + L++FS +GK + ++SPT + + F ++Y+ + +W+ + + K+ + + L K +R +D ++ T L LE N+ ++ VR K I + + +R EER+G Sbjct: 1 MGRGRSEIKRIENPTQRQSTFYKRRDGLFKKARELAVLCDADLLLLLFSASGKLYHFLSPTVPSVREFVERYEATTHTKVWADIRQERRAELEKVGSMCDLLEKQLRFMTVDDGEEYTVPSLEALEHNLEAAMRKVRSEKDRKIGGEICYLQNIIRGRQEERYG 164
BLAST of CV887194 vs. ExPASy Swiss-Prot
Match: AP1_SINAL (Floral homeotic protein APETALA 1 OS=Sinapis alba GN=AP1 PE=2 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 1.172e-23 Identity = 59/166 (35.54%), Postives = 102/166 (61.45%), Query Frame = 2 Query: 95 MGRGKIEIKRIENPTNRQVTYSKRRNGIFKKAQELTVLCDAKVSLIMFSNTGKFHEYISPTTTTKKMFDQYQKSLGVDLW-----STHYAKMQESYRKLKEINNKLRKDIRQRMGEDLDDLTFEELRGLEQNMSSSAATVRERKFHVIKTQTDTYKKKVRNLEERH 577 MGRG++++KRIEN NRQVT+SKRR G+ KKA E++VLCDA+V+L++FS+ GK EY S + +K+ ++Y++ + S Y +LK L ++ R +GEDL ++ +EL+ LEQ + ++ +R RK ++ + ++K + ++E++ Sbjct: 1 MGRGRVQLKRIENKINRQVTFSKRRAGLLKKAHEISVLCDAEVALVVFSHKGKLFEY-STDSCMEKILERYERYSYAERQLIAPESDVNTNWSMEYNRLKAKIELLERNQRHYLGEDLQAMSSKELQNLEQQLDTALKHIRSRKNQLMHDSINELQRKEKAIQEQN 165
BLAST of CV887194 vs. ExPASy Swiss-Prot
Match: AGL8_SOLCO (Agamous-like MADS-box protein AGL8 homolog OS=Solanum commersonii GN=SCM1 PE=2 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 1.172e-23 Identity = 60/169 (35.50%), Postives = 100/169 (59.17%), Query Frame = 2 Query: 95 MGRGKIEIKRIENPTNRQVTYSKRRNGIFKKAQELTVLCDAKVSLIMFSNTGKFHEYISPTTTTKKMFDQYQKSLGVDLWSTHYAKMQESYRKLKEINNKLRKDIRQR-----MGEDLDDLTFEELRGLEQNMSSSAATVRERKFHVIKTQTDTYKKKVRNLEERHGNI 586 MGRG++++KRIEN NRQVT+SKRR+G+ KKA E++VLCDA+V LI+FS GK EY + + +++ ++Y++ + L+ K R ++ QR +GEDL+ L +EL+ LE ++S+ +R RK ++ +K+ R L+E++ + Sbjct: 1 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVGLIVFSTKGKLFEY-ATDSCMERLLERYERYSFAEKQLVPTDHTSPGSWTLENAKLKARLEVLQRNEKLYVGEDLESLNMKELQNLEHQLASALKHIRSRKNQLMHESISVLQKQDRALQEQNNQL 168
BLAST of CV887194 vs. ExPASy Swiss-Prot
Match: AP1_ARATH (Floral homeotic protein APETALA 1 OS=Arabidopsis thaliana GN=AP1 PE=1 SV=2) HSP 1 Score: 110.153 bits (274), Expect = 1.531e-23 Identity = 60/166 (36.14%), Postives = 102/166 (61.45%), Query Frame = 2 Query: 95 MGRGKIEIKRIENPTNRQVTYSKRRNGIFKKAQELTVLCDAKVSLIMFSNTGKFHEYISPTTTTKKMFDQYQKSLGVDLW-----STHYAKMQESYRKLKEINNKLRKDIRQRMGEDLDDLTFEELRGLEQNMSSSAATVRERKFHVIKTQTDTYKKKVRNLEERH 577 MGRG++++KRIEN NRQVT+SKRR G+ KKA E++VLCDA+V+L++FS+ GK EY S + +K+ ++Y++ + S Y +LK L ++ R +GEDL ++ +EL+ LEQ + ++ +R RK ++ + +KK + ++E++ Sbjct: 1 MGRGRVQLKRIENKINRQVTFSKRRAGLLKKAHEISVLCDAEVALVVFSHKGKLFEY-STDSCMEKILERYERYSYAERQLIAPESDVNTNWSMEYNRLKAKIELLERNQRHYLGEDLQAMSPKELQNLEQQLDTALKHIRTRKNQLMYESINELQKKEKAIQEQN 165 The following BLAST results are available for this feature:
BLAST of CV887194 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 117
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Sequences
The
following sequences are available for this feature:
EST sequence >CV887194 ID=CV887194; Name=CV887194; organism=Citrus sinensis; type=EST; length=837bpback to top |