EY665675
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY665675 vs. ExPASy Swiss-Prot
Match: CB21_RAPSA (Chlorophyll a-b binding of LHCII type 1 protein (Fragment) OS=Raphanus sativus PE=2 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 7.731e-21 Identity = 56/98 (57.14%), Postives = 67/98 (68.37%), Query Frame = 3 Query: 498 LDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAG-GPLGEVTDPLYPGWQL*SIWVWLKTRRLLLNSRVKKSRMGRVVMFSLFGF----LRSGPGP 776 LDYLGNPSL+HAQSILAIWA QV+LMGAVEGYR+AG GPLGE D LYPG + L +VK+ + GR+ MFS+FGF + +G GP Sbjct: 1 LDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGDGPLGEAEDLLYPGGSFDPL-ASLTDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 97
BLAST of EY665675 vs. ExPASy Swiss-Prot
Match: CB2F_SOLLC (Chlorophyll a-b binding protein 3B, chloroplastic (Fragments) OS=Solanum lycopersicum GN=CAB3B PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 1.319e-20 Identity = 53/90 (58.89%), Postives = 64/90 (71.11%), Query Frame = 3 Query: 519 SLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGWQL*SIWVWLKTRRLLLNSRVKKSRMGRVVMFSLFGF----LRSGPGP 776 SL+HAQSILAIWACQVVLMGAVEGYRIAGGPLGEV DPLYPG + + + +VK+ + GR+ MFS+FGF + +G GP Sbjct: 152 SLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGL-AEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 240
BLAST of EY665675 vs. ExPASy Swiss-Prot
Match: CB2E_SOLLC (Chlorophyll a-b binding protein 3A, chloroplastic (Fragments) OS=Solanum lycopersicum GN=CAB3A PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 1.319e-20 Identity = 53/90 (58.89%), Postives = 64/90 (71.11%), Query Frame = 3 Query: 519 SLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGWQL*SIWVWLKTRRLLLNSRVKKSRMGRVVMFSLFGF----LRSGPGP 776 SL+HAQSILAIWACQVVLMGAVEGYRIAGGPLGEV DPLYPG + + + +VK+ + GR+ MFS+FGF + +G GP Sbjct: 152 SLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGL-AEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 240
BLAST of EY665675 vs. ExPASy Swiss-Prot
Match: CB2D_SOLLC (Chlorophyll a-b binding protein 1D (Fragment) OS=Solanum lycopersicum GN=CAB1D PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 1.319e-20 Identity = 53/90 (58.89%), Postives = 64/90 (71.11%), Query Frame = 3 Query: 519 SLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGWQL*SIWVWLKTRRLLLNSRVKKSRMGRVVMFSLFGF----LRSGPGP 776 SL+HAQSILAIWACQVVLMGAVEGYRIAGGPLGEV DPLYPG + + + +VK+ + GR+ MFS+FGF + +G GP Sbjct: 1 SLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGL-AEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 89
BLAST of EY665675 vs. ExPASy Swiss-Prot
Match: CB2C_SOLLC (Chlorophyll a-b binding protein 1C, chloroplastic (Fragments) OS=Solanum lycopersicum GN=CAB1C PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 1.319e-20 Identity = 53/90 (58.89%), Postives = 64/90 (71.11%), Query Frame = 3 Query: 519 SLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGWQL*SIWVWLKTRRLLLNSRVKKSRMGRVVMFSLFGF----LRSGPGP 776 SL+HAQSILAIWACQVVLMGAVEGYRIAGGPLGEV DPLYPG + + + +VK+ + GR+ MFS+FGF + +G GP Sbjct: 150 SLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGL-AEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 238
BLAST of EY665675 vs. ExPASy Swiss-Prot
Match: CB2A_SOLLC (Chlorophyll a-b binding protein 1A, chloroplastic (Fragments) OS=Solanum lycopersicum GN=CAB1A PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 1.319e-20 Identity = 53/90 (58.89%), Postives = 64/90 (71.11%), Query Frame = 3 Query: 519 SLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGWQL*SIWVWLKTRRLLLNSRVKKSRMGRVVMFSLFGF----LRSGPGP 776 SL+HAQSILAIWACQVVLMGAVEGYRIAGGPLGEV DPLYPG + + + +VK+ + GR+ MFS+FGF + +G GP Sbjct: 150 SLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGL-AEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 238
BLAST of EY665675 vs. ExPASy Swiss-Prot
Match: CB12_SOLLC (Chlorophyll a-b binding protein 7, chloroplastic OS=Solanum lycopersicum GN=CAB7 PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.561e-13 Identity = 58/189 (30.69%), Postives = 91/189 (48.15%), Query Frame = 3 Query: 267 PKLLDW*VPCDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAG--GPLGEVTDPLYPGWQL*SIWV------WLK-------TRRLLLNSRVKKSRMGRVVMFSLFG----FLRSGPGP 776 P LD +P D+G+D GL++DPE+ N++ E++HCRWAMLGA G PELL + G+ W+ AG Q +Y + + ++ ++VL+G EG R A P TDP++P +L V W + + R K+ + GR+ M ++ G + +G GP Sbjct: 75 PPWLDGSLPGDFGFDPLGLASDPESLRWNQQAELVHCRWAMLGAAGIFIPELLTKIGI-LNTPSWYTAGEQ-------EYFTDTT--------TLFIVELVLIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPAKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGP 247
BLAST of EY665675 vs. ExPASy Swiss-Prot
Match: CB12_PETHY (Chlorophyll a-b binding protein, chloroplastic OS=Petunia hybrida PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 5.023e-12 Identity = 57/189 (30.16%), Postives = 88/189 (46.56%), Query Frame = 3 Query: 267 PKLLDW*VPCDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAG--GPLGEVTDPLYPGWQL*SIWV------WLK-------TRRLLLNSRVKKSRMGRVVMFSLFG----FLRSGPGP 776 P+ LD +P D+G+D GL +DPE+ N + E++H RWAMLGA G PE L + GV W+ AG Q +Y + + ++ ++VL+G EG R A P TDP++P +L V W + + R K+ + GR+ M ++ G + +G GP Sbjct: 75 PEWLDGSLPGDFGFDPLGLGSDPESLKWNAQAELVHSRWAMLGAAGIFIPEFLTKIGV-LNTPSWYTAGEQ-------EYFTDTT--------TLFVIELVLIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPAKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGP 247 The following BLAST results are available for this feature:
BLAST of EY665675 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 68
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Sequences
The
following sequences are available for this feature:
EST sequence >EY665675 ID=EY665675; Name=EY665675; organism=Citrus sinensis; type=EST; length=885bpback to top |