CV887153
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV887153 vs. ExPASy Swiss-Prot
Match: COPA1_ORYSJ (Coatomer subunit alpha-1 OS=Oryza sativa subsp. japonica GN=Os03g0711400 PE=2 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 2.867e-23 Identity = 49/119 (41.18%), Postives = 71/119 (59.66%), Query Frame = 3 Query: 153 KLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDW 509 K +S RVK + HP PWILASL+SG + +W+Y+ T+ F+ + PVR F A + V+G DD I+V+NY T + H DYIR V H P+++S+SDD I++W+W Sbjct: 4 KFETKSNRVKGLSFHPRRPWILASLHSGVIQMWDYRMGTLLDRFDEHDGPVRGVHFHATQPLFVSGGDDYKIKVWNYKTHRCLFTLHGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNW 122
BLAST of CV887153 vs. ExPASy Swiss-Prot
Match: COPA2_ARATH (Coatomer subunit alpha-2 OS=Arabidopsis thaliana GN=At2g21390 PE=2 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 1.423e-22 Identity = 49/119 (41.18%), Postives = 70/119 (58.82%), Query Frame = 3 Query: 153 KLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDW 509 K +S RVK + HP PWILASL+SG + +W+Y+ T+ F+ E PVR F + V+G DD I+V+NY T + H DYIR V H P+++S+SDD I++W+W Sbjct: 4 KFETKSNRVKGLSFHPKRPWILASLHSGVIQLWDYRMGTLIDRFDEHEGPVRGVHFHNSQPLFVSGGDDYKIKVWNYKTHRCLFTLLGHLDYIRTVQFHHENPWIVSASDDQTIRIWNW 122
BLAST of CV887153 vs. ExPASy Swiss-Prot
Match: COPA1_ARATH (Coatomer subunit alpha-1 OS=Arabidopsis thaliana GN=At1g62020 PE=1 SV=2) HSP 1 Score: 104.375 bits (259), Expect = 3.170e-22 Identity = 48/119 (40.34%), Postives = 69/119 (57.98%), Query Frame = 3 Query: 153 KLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDW 509 K +S RVK + HP PWILASL+SG + +W+Y+ T+ F+ E PVR F + V+G DD I+V+NY + H DYIR V H P+++S+SDD I++W+W Sbjct: 4 KFETKSNRVKGLSFHPKRPWILASLHSGVIQLWDYRMGTLIDRFDEHEGPVRGVHFHNSQPLFVSGGDDYKIKVWNYKNHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNW 122
BLAST of CV887153 vs. ExPASy Swiss-Prot
Match: COPA_SCHPO (Putative coatomer subunit alpha OS=Schizosaccharomyces pombe GN=SPBPJ4664.04 PE=1 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 3.505e-21 Identity = 45/124 (36.29%), Postives = 70/124 (56.45%), Query Frame = 3 Query: 138 LEIKRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDW 509 +E+ K RS R K V HP++PWIL SL++G + +W+Y+ T+ F+ + PVR F + V+G DD + V+NY + + H DY+R H P++LS SDD I++W+W Sbjct: 1 MEMLTKFESRSSRAKGVAFHPTQPWILTSLHNGRIQLWDYRMGTLLDRFDGHDGPVRGIAFHPTQPLFVSGGDDYKVNVWNYKSRKLLFSLCGHMDYVRVCTFHHEYPWILSCSDDQTIRIWNW 124
BLAST of CV887153 vs. ExPASy Swiss-Prot
Match: COPA_YEAST (Coatomer subunit alpha OS=Saccharomyces cerevisiae GN=RET1 PE=1 SV=2) HSP 1 Score: 100.523 bits (249), Expect = 4.577e-21 Identity = 44/124 (35.48%), Postives = 72/124 (58.06%), Query Frame = 3 Query: 138 LEIKRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDW 509 +++ K +S R K + HPS PW+L +L+S T+ +W+Y+ T+ FE E PVR F + V+ DD I+V++ +T + H DY+R V H LP+++S+SDD I++W+W Sbjct: 1 MKMLTKFESKSTRAKGIAFHPSRPWVLVALFSSTIQLWDYRMGTLLHRFEDHEGPVRGLDFHPTQPIFVSAGDDYTIKVWSLDTNKCLYTLTGHLDYVRTVFFHRELPWIISASDDQTIRIWNW 124
BLAST of CV887153 vs. ExPASy Swiss-Prot
Match: COPA_MOUSE (Coatomer subunit alpha OS=Mus musculus GN=Copa PE=1 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 7.807e-21 Identity = 45/119 (37.82%), Postives = 68/119 (57.14%), Query Frame = 3 Query: 153 KLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDW 509 K +S RVK + HP PWIL SL++G + +W+Y+ T+ F+ + PVR F ++ V+G DD I+V+NY + H DYIR H P++LS+SDD I++W+W Sbjct: 4 KFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFHKQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVWNW 122
BLAST of CV887153 vs. ExPASy Swiss-Prot
Match: COPA_HUMAN (Coatomer subunit alpha OS=Homo sapiens GN=COPA PE=1 SV=2) HSP 1 Score: 99.7525 bits (247), Expect = 7.807e-21 Identity = 45/119 (37.82%), Postives = 68/119 (57.14%), Query Frame = 3 Query: 153 KLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDW 509 K +S RVK + HP PWIL SL++G + +W+Y+ T+ F+ + PVR F ++ V+G DD I+V+NY + H DYIR H P++LS+SDD I++W+W Sbjct: 4 KFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFHKQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVWNW 122
BLAST of CV887153 vs. ExPASy Swiss-Prot
Match: COPA_BOVIN (Coatomer subunit alpha OS=Bos taurus GN=COPA PE=1 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 7.807e-21 Identity = 45/119 (37.82%), Postives = 68/119 (57.14%), Query Frame = 3 Query: 153 KLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDW 509 K +S RVK + HP PWIL SL++G + +W+Y+ T+ F+ + PVR F ++ V+G DD I+V+NY + H DYIR H P++LS+SDD I++W+W Sbjct: 4 KFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFHKQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVWNW 122 The following BLAST results are available for this feature:
BLAST of CV887153 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 28
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CV887153 ID=CV887153; Name=CV887153; organism=Citrus sinensis; type=EST; length=510bpback to top |