EY665669

Overview
NameEY665669
Unique NameEY665669
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length892
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665669 vs. ExPASy Swiss-Prot
Match: RA212_ARATH (Ethylene-responsive transcription factor RAP2-12 OS=Arabidopsis thaliana GN=RAP2-12 PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 1.062e-17
Identity = 42/70 (60.00%), Postives = 57/70 (81.43%), Query Frame = 2
Query:  254 KLADTEERKHYRGVRRRPWGKYAAEIRDPARKGSRVWLGTFDSDVDAAKAYDSAAFRMRGRKAILNFPLE 463
            K A+ + +  YRG+R+RPWGK+AAEIRDP R+G+R+WLGTF +  +AA+AYD+AA R+RG KA +NFP E
Sbjct:  115 KSANRKRKNQYRGIRQRPWGKWAAEIRDP-REGARIWLGTFKTAEEAARAYDAAARRIRGSKAKVNFPEE 183          
BLAST of EY665669 vs. ExPASy Swiss-Prot
Match: PTI6_SOLLC (Pathogenesis-related genes transcriptional activator PTI6 OS=Solanum lycopersicum GN=PTI6 PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 1.062e-17
Identity = 44/100 (44.00%), Postives = 64/100 (64.00%), Query Frame = 2
Query:  176 IKPEPLDITCLGSSNWTESPQKRSEPKLADTEERKHYRGVRRRPWGKYAAEIRDPARKGSRVWLGTFDSDVDAAKAYDSAAFRMRGRKAILNFPLEAGAD 475
            +K    +I  + S+      ++RS    +D   RK +RGVR+RPWG++AAEIRDP R G RVWLGT+D+  +AA  YD AA +++G  A+ NFP+   A+
Sbjct:   62 VKRHVTEINLMPSTKSIGDRKRRSVSPDSDVTRRKKFRGVRQRPWGRWAAEIRDPTR-GKRVWLGTYDTPEEAAVVYDKAAVKLKGPDAVTNFPVSTTAE 160          
BLAST of EY665669 vs. ExPASy Swiss-Prot
Match: EF113_ARATH (Ethylene-responsive transcription factor ERF113 OS=Arabidopsis thaliana GN=ERF113 PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 1.062e-17
Identity = 42/65 (64.62%), Postives = 52/65 (80.00%), Query Frame = 2
Query:  263 DTEERKHYRGVRRRPWGKYAAEIRDPARKGSRVWLGTFDSDVDAAKAYDSAAFRMRGRKAILNFP 457
            D   R+HYRGVR+RPWGK+AAEIRDP +K +RVWLGTF++  +AA AYD AA + +G KA LNFP
Sbjct:   32 DQPRRRHYRGVRQRPWGKWAAEIRDP-KKAARVWLGTFETAEEAALAYDRAALKFKGTKAKLNFP 95          
BLAST of EY665669 vs. ExPASy Swiss-Prot
Match: ABR1_ARATH (Ethylene-responsive transcription factor ABR1 OS=Arabidopsis thaliana GN=ABR1 PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.388e-17
Identity = 43/63 (68.25%), Postives = 50/63 (79.37%), Query Frame = 2
Query:  269 EERKHYRGVRRRPWGKYAAEIRDPARKGSRVWLGTFDSDVDAAKAYDSAAFRMRGRKAILNFP 457
            + R+ YRGVR+RPWGK+AAEIRDP  K +RVWLGTFD+   AA+AYD AA R RG KA LNFP
Sbjct:  180 QPRRRYRGVRQRPWGKWAAEIRDPF-KAARVWLGTFDNAESAARAYDEAALRFRGNKAKLNFP 241          
BLAST of EY665669 vs. ExPASy Swiss-Prot
Match: RAP26_ARATH (Ethylene-responsive transcription factor RAP2-6 OS=Arabidopsis thaliana GN=RAP2-6 PE=2 SV=2)

HSP 1 Score: 90.1225 bits (222), Expect = 1.812e-17
Identity = 44/70 (62.86%), Postives = 52/70 (74.29%), Query Frame = 2
Query:  269 EERKHYRGVRRRPWGKYAAEIRDPARKGSRVWLGTFDSDVDAAKAYDSAAFRMRGRKAILNFPLEAGADS 478
            E  K YRGVR+RPWGK+AAEIRDP  K +RVWLGTF++   AA+AYD+AA R RG KA LNFP   G  +
Sbjct:   56 ERPKKYRGVRQRPWGKWAAEIRDP-HKATRVWLGTFETAEAAARAYDAAALRFRGSKAKLNFPENVGTQT 124          
BLAST of EY665669 vs. ExPASy Swiss-Prot
Match: ERF77_ARATH (Ethylene-responsive transcription factor 10 OS=Arabidopsis thaliana GN=ERF10 PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.812e-17
Identity = 42/59 (71.19%), Postives = 49/59 (83.05%), Query Frame = 2
Query:  284 YRGVRRRPWGKYAAEIRDPARKGSRVWLGTFDSDVDAAKAYDSAAFRMRGRKAILNFPL 460
            YRGVRRRPWG+YAAEIRDP +K  RVWLG+F++  +AA+AYDSAA R RG KA  NFPL
Sbjct:   53 YRGVRRRPWGRYAAEIRDPVKK-KRVWLGSFNTGEEAARAYDSAAIRFRGSKATTNFPL 110          
BLAST of EY665669 vs. ExPASy Swiss-Prot
Match: ERF1_ORYSJ (Ethylene-responsive transcription factor 1 OS=Oryza sativa subsp. japonica GN=EREBP1 PE=1 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.812e-17
Identity = 46/97 (47.42%), Postives = 64/97 (65.98%), Query Frame = 2
Query:  254 KLADTEERKHYRGVRRRPWGKYAAEIRDPARKGSRVWLGTFDSDVDAAKAYDSAAFRMRGRKAILNFPLEAGADSPPAKNSRKRRREKTLDLQESTI 544
            K A  + +  +RG+R+RPWGK+AAEIRDP RKG RVWLGTF+S  +AA+AYD+ A R+RG+KA +NFP        P    ++R    T    +S++
Sbjct:  110 KSAKRKRKNQFRGIRQRPWGKWAAEIRDP-RKGVRVWLGTFNSAEEAARAYDAEARRIRGKKAKVNFP------EAPTTAQKRRAGSTTAKAPKSSV 199          
BLAST of EY665669 vs. ExPASy Swiss-Prot
Match: EF114_ARATH (Ethylene-responsive transcription factor ERF114 OS=Arabidopsis thaliana GN=ERF114 PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.812e-17
Identity = 46/88 (52.27%), Postives = 63/88 (71.59%), Query Frame = 2
Query:  227 ESPQKRSEPKLADTEE--RKHYRGVRRRPWGKYAAEIRDPARKGSRVWLGTFDSDVDAAKAYDSAAFRMRGRKAILNFP--LEAGADS 478
            + P ++  P   D  +  R+HYRGVR+RPWGK+AAEIRDP +K +RVWLGTF++   AA AYD AA + +G KA LNFP  ++ G++S
Sbjct:   69 QDPNQQVAPTHQDQGDLRRRHYRGVRQRPWGKWAAEIRDP-KKAARVWLGTFETAESAALAYDEAALKFKGSKAKLNFPERVQLGSNS 155          
BLAST of EY665669 vs. ExPASy Swiss-Prot
Match: ERF78_ARATH (Ethylene-responsive transcription factor 4 OS=Arabidopsis thaliana GN=ERF4 PE=1 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 2.367e-17
Identity = 47/83 (56.63%), Postives = 57/83 (68.67%), Query Frame = 2
Query:  284 YRGVRRRPWGKYAAEIRDPARKGSRVWLGTFDSDVDAAKAYDSAAFRMRGRKAILNFP--LEAGADSPPAKNSRKRRREKTLD 526
            YRGVR+RPWG+YAAEIRDP +K +RVWLGTFD+  +AA+AYD+AA   RG KA  NFP  LE      P   +R   +  TLD
Sbjct:   25 YRGVRKRPWGRYAAEIRDPGKK-TRVWLGTFDTAEEAARAYDTAARDFRGAKAKTNFPTFLELSDQKVPTGFARSPSQSSTLD 106          
BLAST of EY665669 vs. ExPASy Swiss-Prot
Match: EF112_ARATH (Ethylene-responsive transcription factor ERF112 OS=Arabidopsis thaliana GN=ERF112 PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 3.091e-17
Identity = 42/61 (68.85%), Postives = 50/61 (81.97%), Query Frame = 2
Query:  275 RKHYRGVRRRPWGKYAAEIRDPARKGSRVWLGTFDSDVDAAKAYDSAAFRMRGRKAILNFP 457
            +++YRGVR+RPWGK+AAEIRDP  K +RVWLGTFD+  +AA AYD AAF  RG KA LNFP
Sbjct:   67 QRNYRGVRQRPWGKWAAEIRDP-NKAARVWLGTFDTAEEAALAYDKAAFEFRGHKAKLNFP 126          
The following BLAST results are available for this feature:
BLAST of EY665669 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 111
Match NameE-valueIdentityDescription
RA212_ARATH1.062e-1760.00Ethylene-responsive transcription factor RAP2-12 O... [more]
PTI6_SOLLC1.062e-1744.00Pathogenesis-related genes transcriptional activat... [more]
EF113_ARATH1.062e-1764.62Ethylene-responsive transcription factor ERF113 OS... [more]
ABR1_ARATH1.388e-1768.25Ethylene-responsive transcription factor ABR1 OS=A... [more]
RAP26_ARATH1.812e-1762.86Ethylene-responsive transcription factor RAP2-6 OS... [more]
ERF77_ARATH1.812e-1771.19Ethylene-responsive transcription factor 10 OS=Ara... [more]
ERF1_ORYSJ1.812e-1747.42Ethylene-responsive transcription factor 1 OS=Oryz... [more]
EF114_ARATH1.812e-1752.27Ethylene-responsive transcription factor ERF114 OS... [more]
ERF78_ARATH2.367e-1756.63Ethylene-responsive transcription factor 4 OS=Arab... [more]
EF112_ARATH3.091e-1768.85Ethylene-responsive transcription factor ERF112 OS... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-102-092-C08-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665669 ID=EY665669; Name=EY665669; organism=Citrus sinensis; type=EST; length=892bp
CATGTCCACATGACAACGCCTGTAAGAAGAATCATCCATCCTGGAATTCA
TTCGCCAGTTTCTTCTCGGAGACTTTACCTCCTTAGACGACCCAAATCTC
TCTTTTCTCCAGCCTATGGAGTCAGAATTCCCTGTGATCAAATCCGAACC
CGACTCCCCCACCTTTTGTGAAATAATAAAACCTGAACCATTGGACATAA
CGTGTTTGGGTTCCAGTAATTGGACAGAATCACCTCAAAAGCGTTCGGAG
CCGAAGCTGGCGGACACTGAAGAGAGGAAGCATTACAGGGGAGTAAGAAG
AAGGCCGTGGGGCAAGTATGCGGCTGAAATCCGGGACCCGGCAAGAAAGG
GCAGCAGGGTTTGGTTGGGAACTTTTGATAGTGATGTTGATGCTGCTAAA
GCTTATGATTCTGCTGCCTTCCGGATGAGGGGTCGCAAAGCAATCTTGAA
TTTCCCTCTGGAGGCTGGAGCTGATAGCCCTCCAGCAAAGAACAGTAGGA
AAAGAAGAAGAGAGAAGACACTGGATTTGCAAGAATCAACCATCTCAATT
ATCTAGAAAAATAAGACCCTTCTCAGATTCAGGACCCCTCAATGTATATG
TGCTGTTATTACTCTTANGAAATATGTAATTTGCTCCCAAGAAAAAAAAA
GGTGTCTTGGGTTTCCAGTTATAAAGTTGACTGGGTGCCAGCTCAAAACT
CAGAATCGGGAATATTCCCGGGTAATCGGAACAAAAAAATAATATTGTAA
CTTGAACATTAGTAAAATTTGCAGTTGGCAAAAGGGACTTTGGGAAAAAA
ATAAATCCATGGAAGTTCCTTGAATGGTTGGCTTTTTTGATTTTTTTTTT
TAAAAAAAAAAAAAAAAGAAAAAAAAAAAAAAAAAAAAAAAA
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