EY665669

Overview
NameEY665669
Unique NameEY665669
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length892
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665669 vs. ExPASy Swiss-Prot
Match: ERF80_ARATH (Ethylene-responsive transcription factor 9 OS=Arabidopsis thaliana GN=ERF9 PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 4.037e-17
Identity = 41/60 (68.33%), Postives = 50/60 (83.33%), Query Frame = 2
Query:  281 HYRGVRRRPWGKYAAEIRDPARKGSRVWLGTFDSDVDAAKAYDSAAFRMRGRKAILNFPL 460
            H+RGVR+RPWG+YAAEIRDP +K +RVWLGTFD+  +AA+AYD+AA   RG KA  NFPL
Sbjct:   32 HFRGVRKRPWGRYAAEIRDPGKK-TRVWLGTFDTAEEAARAYDTAAREFRGSKAKTNFPL 90          
BLAST of EY665669 vs. ExPASy Swiss-Prot
Match: ERF73_ARATH (Ethylene-responsive transcription factor ERF073 OS=Arabidopsis thaliana GN=ERF073 PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 8.995e-17
Identity = 46/94 (48.94%), Postives = 62/94 (65.96%), Query Frame = 2
Query:  269 EERKHYRGVRRRPWGKYAAEIRDPARKGSRVWLGTFDSDVDAAKAYDSAAFRMRGRKAILNFPLE-AGADSPPAKNSRKRRREKTLDLQESTIS 547
            ++   Y+G+RRRPWG++AAEIRDP  KG RVWLGTF++  +AA+AYD  A R+RG KA LNFP E +G     AK  ++       DL  + +S
Sbjct:   20 KQSSRYKGIRRRPWGRWAAEIRDPI-KGVRVWLGTFNTAEEAARAYDLEAKRIRGAKAKLNFPNESSGKRKAKAKTVQQVEENHEADLDVAVVS 112          
BLAST of EY665669 vs. ExPASy Swiss-Prot
Match: ERF3_TOBAC (Ethylene-responsive transcription factor 3 OS=Nicotiana tabacum GN=ERF3 PE=2 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 1.175e-16
Identity = 43/71 (60.56%), Postives = 54/71 (76.06%), Query Frame = 2
Query:  248 EPKLADTEERKHYRGVRRRPWGKYAAEIRDPARKGSRVWLGTFDSDVDAAKAYDSAAFRMRGRKAILNFPL 460
            EP  +   +   +RGVR+RPWG++AAEIRDP +K +RVWLGTFDS  DAA+AYD+AA  +RG KA  NFPL
Sbjct:   16 EPNGSGGSKEIRFRGVRKRPWGRFAAEIRDPWKK-TRVWLGTFDSAEDAARAYDAAARALRGPKAKTNFPL 85          
BLAST of EY665669 vs. ExPASy Swiss-Prot
Match: EF115_ARATH (Ethylene-responsive transcription factor ERF115 OS=Arabidopsis thaliana GN=ERF115 PE=2 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 1.175e-16
Identity = 41/64 (64.06%), Postives = 52/64 (81.25%), Query Frame = 2
Query:  275 RKHYRGVRRRPWGKYAAEIRDPARKGSRVWLGTFDSDVDAAKAYDSAAFRMRGRKAILNFPLEA 466
            ++HYRGVR+RPWGK+AAEIRDP +K +RVWLGTF++   AA AYD+AA + +G KA LNFP  A
Sbjct:   89 KRHYRGVRQRPWGKWAAEIRDP-QKAARVWLGTFETAEAAALAYDNAALKFKGSKAKLNFPERA 151          
BLAST of EY665669 vs. ExPASy Swiss-Prot
Match: RAP23_ARATH (Ethylene-responsive transcription factor RAP2-3 OS=Arabidopsis thaliana GN=RAP2-3 PE=1 SV=2)

HSP 1 Score: 86.6557 bits (213), Expect = 2.004e-16
Identity = 45/78 (57.69%), Postives = 58/78 (74.36%), Query Frame = 2
Query:  227 ESPQKRSEPKLADTEERKH-YRGVRRRPWGKYAAEIRDPARKGSRVWLGTFDSDVDAAKAYDSAAFRMRGRKAILNFP 457
            E+ +K    +     +RK+ YRG+R+RPWGK+AAEIRDP RKG RVWLGTF++  +AA AYD AA ++RG KA LNFP
Sbjct:   59 EAVKKEQATEPGKRRKRKNVYRGIRKRPWGKWAAEIRDP-RKGVRVWLGTFNTAEEAAMAYDVAAKQIRGDKAKLNFP 135          
BLAST of EY665669 vs. ExPASy Swiss-Prot
Match: ERF81_ARATH (Ethylene-responsive transcription factor 12 OS=Arabidopsis thaliana GN=ERF12 PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 4.464e-16
Identity = 42/65 (64.62%), Postives = 49/65 (75.38%), Query Frame = 2
Query:  281 HYRGVRRRPWGKYAAEIRDPARKGSRVWLGTFDSDVDAAKAYDSAAFRMRGRKAILNFPLEAGAD 475
            HYRGVR+RPWG+YAAEIRDP +K +RVWLGTFD+  +AA AYD AA  +RG KA  NFP     D
Sbjct:   11 HYRGVRKRPWGRYAAEIRDPWKK-TRVWLGTFDTPEEAALAYDGAARFLRGIKAKTNFPSPLSLD 74          
BLAST of EY665669 vs. ExPASy Swiss-Prot
Match: ERF76_ARATH (Ethylene-responsive transcription factor 11 OS=Arabidopsis thaliana GN=ERF11 PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 4.464e-16
Identity = 40/58 (68.97%), Postives = 46/58 (79.31%), Query Frame = 2
Query:  284 YRGVRRRPWGKYAAEIRDPARKGSRVWLGTFDSDVDAAKAYDSAAFRMRGRKAILNFP 457
            YRGVR+RPWG+YAAEIRDP +K SRVWLGTFD+  +AA+AYD  A   RG KA  NFP
Sbjct:   20 YRGVRKRPWGRYAAEIRDPFKK-SRVWLGTFDTPEEAARAYDKRAIEFRGAKAKTNFP 76          
BLAST of EY665669 vs. ExPASy Swiss-Prot
Match: CRF3_ARATH (Ethylene-responsive transcription factor CRF3 OS=Arabidopsis thaliana GN=CRF3 PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 4.464e-16
Identity = 45/108 (41.67%), Postives = 70/108 (64.81%), Query Frame = 2
Query:  212 SSNWTESP---QKRSEPKLADTEERKHYRGVRRRPWGKYAAEIRDPARKGSRVWLGTFDSDVDAAKAYDSAAFRMRGRKAILNFPLEAGADSPPAKNSRKRRREKTLD 526
            SS+ T+SP   ++R   K++ + + K +RGVR+RPWGK+AAEIRDP ++  R+WLGTF++  +AA  YD+AA R+RG  A+ NF +      PP +   +   E  ++
Sbjct:   98 SSDETQSPASSRQRPNNKVSVSGQIKKFRGVRQRPWGKWAAEIRDPEQR-RRIWLGTFETAEEAAVVYDNAAIRLRGPDALTNFSI------PPQEEEEEEEPEPVIE 198          
BLAST of EY665669 vs. ExPASy Swiss-Prot
Match: EF109_ARATH (Ethylene-responsive transcription factor ERF109 OS=Arabidopsis thaliana GN=ERF109 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 9.945e-16
Identity = 40/62 (64.52%), Postives = 49/62 (79.03%), Query Frame = 2
Query:  272 ERKHYRGVRRRPWGKYAAEIRDPARKGSRVWLGTFDSDVDAAKAYDSAAFRMRGRKAILNFP 457
            ++  YRGVR+RPWGK+AAEIRDP R  +RVWLGTF++  DAA+AYD AA   RG +A LNFP
Sbjct:  132 KKNGYRGVRQRPWGKFAAEIRDPKR-ATRVWLGTFETAEDAARAYDRAAIGFRGPRAKLNFP 192          
BLAST of EY665669 vs. ExPASy Swiss-Prot
Match: ERF91_ARATH (Ethylene-responsive transcription factor ERF091 OS=Arabidopsis thaliana GN=ERF091 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.696e-15
Identity = 41/63 (65.08%), Postives = 48/63 (76.19%), Query Frame = 2
Query:  278 KHYRGVRRRPWGKYAAEIRDPARKGSRVWLGTFDSDVDAAKAYDSAAFRMRG-RKAILNFPLE 463
            + YRGVR+RPWGK+AAEIRD  R G RVWLGTF +  +AA AYD AA R+RG +KA  NF LE
Sbjct:  108 RKYRGVRKRPWGKFAAEIRDSTRNGVRVWLGTFQTAEEAAMAYDKAAVRIRGTQKAHTNFQLE 170          
The following BLAST results are available for this feature:
BLAST of EY665669 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 111
Match NameE-valueIdentityDescription
ERF80_ARATH4.037e-1768.33Ethylene-responsive transcription factor 9 OS=Arab... [more]
ERF73_ARATH8.995e-1748.94Ethylene-responsive transcription factor ERF073 OS... [more]
ERF3_TOBAC1.175e-1660.56Ethylene-responsive transcription factor 3 OS=Nico... [more]
EF115_ARATH1.175e-1664.06Ethylene-responsive transcription factor ERF115 OS... [more]
RAP23_ARATH2.004e-1657.69Ethylene-responsive transcription factor RAP2-3 OS... [more]
ERF81_ARATH4.464e-1664.62Ethylene-responsive transcription factor 12 OS=Ara... [more]
ERF76_ARATH4.464e-1668.97Ethylene-responsive transcription factor 11 OS=Ara... [more]
CRF3_ARATH4.464e-1641.67Ethylene-responsive transcription factor CRF3 OS=A... [more]
EF109_ARATH9.945e-1664.52Ethylene-responsive transcription factor ERF109 OS... [more]
ERF91_ARATH1.696e-1565.08Ethylene-responsive transcription factor ERF091 OS... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-102-092-C08-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665669 ID=EY665669; Name=EY665669; organism=Citrus sinensis; type=EST; length=892bp
CATGTCCACATGACAACGCCTGTAAGAAGAATCATCCATCCTGGAATTCA
TTCGCCAGTTTCTTCTCGGAGACTTTACCTCCTTAGACGACCCAAATCTC
TCTTTTCTCCAGCCTATGGAGTCAGAATTCCCTGTGATCAAATCCGAACC
CGACTCCCCCACCTTTTGTGAAATAATAAAACCTGAACCATTGGACATAA
CGTGTTTGGGTTCCAGTAATTGGACAGAATCACCTCAAAAGCGTTCGGAG
CCGAAGCTGGCGGACACTGAAGAGAGGAAGCATTACAGGGGAGTAAGAAG
AAGGCCGTGGGGCAAGTATGCGGCTGAAATCCGGGACCCGGCAAGAAAGG
GCAGCAGGGTTTGGTTGGGAACTTTTGATAGTGATGTTGATGCTGCTAAA
GCTTATGATTCTGCTGCCTTCCGGATGAGGGGTCGCAAAGCAATCTTGAA
TTTCCCTCTGGAGGCTGGAGCTGATAGCCCTCCAGCAAAGAACAGTAGGA
AAAGAAGAAGAGAGAAGACACTGGATTTGCAAGAATCAACCATCTCAATT
ATCTAGAAAAATAAGACCCTTCTCAGATTCAGGACCCCTCAATGTATATG
TGCTGTTATTACTCTTANGAAATATGTAATTTGCTCCCAAGAAAAAAAAA
GGTGTCTTGGGTTTCCAGTTATAAAGTTGACTGGGTGCCAGCTCAAAACT
CAGAATCGGGAATATTCCCGGGTAATCGGAACAAAAAAATAATATTGTAA
CTTGAACATTAGTAAAATTTGCAGTTGGCAAAAGGGACTTTGGGAAAAAA
ATAAATCCATGGAAGTTCCTTGAATGGTTGGCTTTTTTGATTTTTTTTTT
TAAAAAAAAAAAAAAAAGAAAAAAAAAAAAAAAAAAAAAAAA
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