EY665669

Overview
NameEY665669
Unique NameEY665669
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length892
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665669 vs. ExPASy Swiss-Prot
Match: CRF1_ARATH (Ethylene-responsive transcription factor CRF1 OS=Arabidopsis thaliana GN=CRF1 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.696e-15
Identity = 43/83 (51.81%), Postives = 56/83 (67.47%), Query Frame = 2
Query:  227 ESPQKRSEPK------LADTEERKHYRGVRRRPWGKYAAEIRDPARKGSRVWLGTFDSDVDAAKAYDSAAFRMRGRKAILNFP 457
            E P K+   K      +  T   + +RGVR+RPWGK+AAEIRDP+R+  RVWLGTFD+  +AA  YD+AA ++RG  A LNFP
Sbjct:   62 EKPMKKKRKKRVVTVPVVVTTATRKFRGVRQRPWGKWAAEIRDPSRR-VRVWLGTFDTAEEAAIVYDNAAIQLRGPNAELNFP 143          
BLAST of EY665669 vs. ExPASy Swiss-Prot
Match: CRF2_ARATH (Ethylene-responsive transcription factor CRF2 OS=Arabidopsis thaliana GN=CRF2 PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 2.215e-15
Identity = 43/122 (35.25%), Postives = 75/122 (61.48%), Query Frame = 2
Query:  266 TEERKHYRGVRRRPWGKYAAEIRDPARKGSRVWLGTFDSDVDAAKAYDSAAFRMRGRKAILNF---PLEAGADSPPAKNSRKRRREKTLDLQESTISII*KNKTLLRFRTPQCICAVITLXK 622
            T   K +RGVR+RPWGK+AAEIRDP ++  R+WLGT+++  +AA  YD+AA ++RG  A+ NF   P  A     P  +  K++++K    ++S  +    + ++ R  +  C+C+ +++ +
Sbjct:  116 TTGEKKFRGVRQRPWGKWAAEIRDPLKR-VRLWLGTYNTAEEAAMVYDNAAIQLRGPDALTNFSVTPTTATEKKAPPPSPVKKKKKKNNKSKKSVTA----SSSISRSSSNDCLCSPVSVLR 232          
BLAST of EY665669 vs. ExPASy Swiss-Prot
Match: ERF79_ARATH (Ethylene-responsive transcription factor 8 OS=Arabidopsis thaliana GN=ERF8 PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.893e-15
Identity = 43/71 (60.56%), Postives = 53/71 (74.65%), Query Frame = 2
Query:  284 YRGVRRRPWGKYAAEIRDPARKGSRVWLGTFDSDVDAAKAYDSAAFRMRGRKAILNFPLEAGADSPPAKNS 496
            YRGVR+RPWG+YAAEIRDP +K +RVWLGTFD+   AA+AYD+AA   RG KA  NF +  G  S P ++S
Sbjct:   31 YRGVRKRPWGRYAAEIRDPVKK-TRVWLGTFDTAQQAARAYDAAARDFRGVKAKTNFGVIVG--SSPTQSS 98          
BLAST of EY665669 vs. ExPASy Swiss-Prot
Match: TINY_ARATH (Ethylene-responsive transcription factor TINY OS=Arabidopsis thaliana GN=TINY PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 1.100e-14
Identity = 43/90 (47.78%), Postives = 62/90 (68.89%), Query Frame = 2
Query:  227 ESPQKRSEPKLADTEERKHYRGVRRRPWGKYAAEIRDPARKGSRVWLGTFDSDVDAAKAYDSAAFRMRGRKAILNFPLEAGADSPPAKNS 496
            E+ +++ +P + D+ +   YRGVR+R WGK+ +EIR+P RK SR+WLGTF S   AA+A+D AA  ++G  AILNFP  AG+   P+  S
Sbjct:   18 ENEEEKKKP-VKDSGKHPVYRGVRKRNWGKWVSEIREP-RKKSRIWLGTFPSPEMAARAHDVAALSIKGASAILNFPDLAGSFPRPSSLS 105          
BLAST of EY665669 vs. ExPASy Swiss-Prot
Match: RAP21_ARATH (Ethylene-responsive transcription factor RAP2-1 OS=Arabidopsis thaliana GN=RAP2-1 PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.875e-14
Identity = 40/78 (51.28%), Postives = 53/78 (67.95%), Query Frame = 2
Query:  236 QKRSEPKLADTEE----RKHYRGVRRRPWGKYAAEIRDPARKGSRVWLGTFDSDVDAAKAYDSAAFRMRGRKAILNFP 457
            +KR +P   +       RK YRG+RRR WGK+ AEIR+P  K SR+WLG++ +D+ AA+AYD A F +RG  A LNFP
Sbjct:   11 RKRRQPPQEEVPNHVATRKPYRGIRRRKWGKWVAEIREP-NKRSRLWLGSYTTDIAAARAYDVAVFYLRGPSARLNFP 87          
BLAST of EY665669 vs. ExPASy Swiss-Prot
Match: LEP_ARATH (Ethylene-responsive transcription factor LEP OS=Arabidopsis thaliana GN=LEP PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 4.178e-14
Identity = 45/92 (48.91%), Postives = 56/92 (60.87%), Query Frame = 2
Query:  218 NWTESPQKRSEPKLADTEERKHYRGVRRRPWGKYAAEIRDPARKGSRVWLGTFDSDVDAAKAYDSAAFRMRGRKAILNFPLEAGADSPPAKN 493
            N T S  K+ +    D +    + GVRRRPWG+YAAEIRDP  K  R WLGTFD+  +AA AYD AA  MRG +A  NF     +D PP+ +
Sbjct:    2 NTTSSKSKKKQ----DDQVGTRFLGVRRRPWGRYAAEIRDPTTK-ERHWLGTFDTAEEAALAYDRAARSMRGTRARTNF---VYSDMPPSSS 85          
BLAST of EY665669 vs. ExPASy Swiss-Prot
Match: ERF58_ARATH (Ethylene-responsive transcription factor ERF058 OS=Arabidopsis thaliana GN=ERF058 PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 4.178e-14
Identity = 48/118 (40.68%), Postives = 67/118 (56.78%), Query Frame = 2
Query:  116 MESEFPVIKSEPDSPTFCEIIKPEPL----DITCLGSSNWTESPQKRSEPKLADTEERKHYRGVRRRPWGKYAAEIRDPARKGSRVWLGTFDSDVDAAKAYDSAAFRMRGRKAILNFP 457
            ME+  P IKS  +  +      P P+    D+    S + +  P    +   +  +  K YRGVR+R WGK+ AEIR P R  +R+WLGTFD+  +AA AYD AA+++RG  A LNFP
Sbjct:   24 MEALLPFIKSPSNDSSAFAFSLPAPISYGSDLHSF-SHHLSPKPVSMKQTGTSAAKPTKLYRGVRQRHWGKWVAEIRLP-RNRTRLWLGTFDTAEEAALAYDKAAYKLRGDFARLNFP 139          
BLAST of EY665669 vs. ExPASy Swiss-Prot
Match: ESR1_ARATH (Ethylene-responsive transcription factor ESR1 OS=Arabidopsis thaliana GN=ESR1 PE=1 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 5.457e-14
Identity = 42/76 (55.26%), Postives = 47/76 (61.84%), Query Frame = 2
Query:  284 YRGVRRRPWGKYAAEIRDPARKGSRVWLGTFDSDVDAAKAYDSAAFRMRGRKAILNFPLEAGADSPPAKNSRKRRR 511
            YRGVRRRPWG+YAAEIRDP  K  R WLGTFD+   AA AYDSAA   RG KA  NF        P  + S   ++
Sbjct:   57 YRGVRRRPWGRYAAEIRDPMSK-ERRWLGTFDTAEQAACAYDSAARAFRGAKARTNFTYPTAVIMPEPRFSFSNKK 131          
BLAST of EY665669 vs. ExPASy Swiss-Prot
Match: ERF53_ARATH (Ethylene-responsive transcription factor ERF053 OS=Arabidopsis thaliana GN=ERF053 PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 5.457e-14
Identity = 43/96 (44.79%), Postives = 57/96 (59.38%), Query Frame = 2
Query:  170 EIIKPEPLDITCLGSSNWTESPQKRSEPKLADTEERKHYRGVRRRPWGKYAAEIRDPARKGSRVWLGTFDSDVDAAKAYDSAAFRMRGRKAILNFP 457
            +I+K  P     + +    ES    + P +      K YRGVR+R WGK+ AEIR P R  +R+WLGTFD+  +AA AYD  AF++RG  A LNFP
Sbjct:  149 DILKLSPSGRMMMMNMLRQESDLPLTRPPVQPFSATKLYRGVRQRHWGKWVAEIRKP-RNRTRLWLGTFDTAEEAAMAYDREAFKLRGETARLNFP 243          
BLAST of EY665669 vs. ExPASy Swiss-Prot
Match: CRF6_ARATH (Ethylene-responsive transcription factor CRF6 OS=Arabidopsis thaliana GN=CRF6 PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 5.457e-14
Identity = 37/69 (53.62%), Postives = 52/69 (75.36%), Query Frame = 2
Query:  248 EPKLADTEERKHYRGVRRRPWGKYAAEIRDPARKGSRVWLGTFDSDVDAAKAYDSAAFRMRGRKAILNF 454
            E  ++ + + K YRGVR+RPWGK+AAEIRDP+ + +R+WLGTF +  +AA AYD AA  ++G KA+ NF
Sbjct:   93 EDDVSTSVKPKKYRGVRQRPWGKFAAEIRDPSSR-TRIWLGTFVTAEEAAIAYDRAAIHLKGPKALTNF 160          
The following BLAST results are available for this feature:
BLAST of EY665669 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 111
Match NameE-valueIdentityDescription
CRF1_ARATH1.696e-1551.81Ethylene-responsive transcription factor CRF1 OS=A... [more]
CRF2_ARATH2.215e-1535.25Ethylene-responsive transcription factor CRF2 OS=A... [more]
ERF79_ARATH2.893e-1560.56Ethylene-responsive transcription factor 8 OS=Arab... [more]
TINY_ARATH1.100e-1447.78Ethylene-responsive transcription factor TINY OS=A... [more]
RAP21_ARATH1.875e-1451.28Ethylene-responsive transcription factor RAP2-1 OS... [more]
LEP_ARATH4.178e-1448.91Ethylene-responsive transcription factor LEP OS=Ar... [more]
ERF58_ARATH4.178e-1440.68Ethylene-responsive transcription factor ERF058 OS... [more]
ESR1_ARATH5.457e-1455.26Ethylene-responsive transcription factor ESR1 OS=A... [more]
ERF53_ARATH5.457e-1444.79Ethylene-responsive transcription factor ERF053 OS... [more]
CRF6_ARATH5.457e-1453.62Ethylene-responsive transcription factor CRF6 OS=A... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-102-092-C08-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665669 ID=EY665669; Name=EY665669; organism=Citrus sinensis; type=EST; length=892bp
CATGTCCACATGACAACGCCTGTAAGAAGAATCATCCATCCTGGAATTCA
TTCGCCAGTTTCTTCTCGGAGACTTTACCTCCTTAGACGACCCAAATCTC
TCTTTTCTCCAGCCTATGGAGTCAGAATTCCCTGTGATCAAATCCGAACC
CGACTCCCCCACCTTTTGTGAAATAATAAAACCTGAACCATTGGACATAA
CGTGTTTGGGTTCCAGTAATTGGACAGAATCACCTCAAAAGCGTTCGGAG
CCGAAGCTGGCGGACACTGAAGAGAGGAAGCATTACAGGGGAGTAAGAAG
AAGGCCGTGGGGCAAGTATGCGGCTGAAATCCGGGACCCGGCAAGAAAGG
GCAGCAGGGTTTGGTTGGGAACTTTTGATAGTGATGTTGATGCTGCTAAA
GCTTATGATTCTGCTGCCTTCCGGATGAGGGGTCGCAAAGCAATCTTGAA
TTTCCCTCTGGAGGCTGGAGCTGATAGCCCTCCAGCAAAGAACAGTAGGA
AAAGAAGAAGAGAGAAGACACTGGATTTGCAAGAATCAACCATCTCAATT
ATCTAGAAAAATAAGACCCTTCTCAGATTCAGGACCCCTCAATGTATATG
TGCTGTTATTACTCTTANGAAATATGTAATTTGCTCCCAAGAAAAAAAAA
GGTGTCTTGGGTTTCCAGTTATAAAGTTGACTGGGTGCCAGCTCAAAACT
CAGAATCGGGAATATTCCCGGGTAATCGGAACAAAAAAATAATATTGTAA
CTTGAACATTAGTAAAATTTGCAGTTGGCAAAAGGGACTTTGGGAAAAAA
ATAAATCCATGGAAGTTCCTTGAATGGTTGGCTTTTTTGATTTTTTTTTT
TAAAAAAAAAAAAAAAAGAAAAAAAAAAAAAAAAAAAAAAAA
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