EY665669

Overview
NameEY665669
Unique NameEY665669
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length892
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665669 vs. ExPASy Swiss-Prot
Match: CRF4_ARATH (Ethylene-responsive transcription factor CRF4 OS=Arabidopsis thaliana GN=CRF4 PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 5.457e-14
Identity = 38/90 (42.22%), Postives = 60/90 (66.67%), Query Frame = 2
Query:  269 EERKHYRGVRRRPWGKYAAEIRDPARKGSRVWLGTFDSDVDAAKAYDSAAFRMRGRKAILNFPLEAGADSPPAKNSRKRRREKTLDLQES 538
            + +K YRGVR+RPWGK+AAEIRDP ++  R+WLGTF +  +AA  YD+AA ++RG  A+ NF ++   + P  +  ++     ++ + ES
Sbjct:  112 QNQKKYRGVRQRPWGKWAAEIRDPEQR-RRIWLGTFATAEEAAIVYDNAAIKLRGPDALTNFTVQPEPE-PVQEQEQEPESNMSVSISES 199          
BLAST of EY665669 vs. ExPASy Swiss-Prot
Match: ESR2_ARATH (Ethylene-responsive transcription factor ESR2 OS=Arabidopsis thaliana GN=ESR2 PE=1 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 7.127e-14
Identity = 40/57 (70.18%), Postives = 43/57 (75.44%), Query Frame = 2
Query:  284 YRGVRRRPWGKYAAEIRDPARKGSRVWLGTFDSDVDAAKAYDSAAFRMRGRKAILNF 454
            YRGVRRRPWG+YAAEIRDP  K  R WLGTFD+  +AA AYD AA  MRG KA  NF
Sbjct:   58 YRGVRRRPWGRYAAEIRDPLSK-ERRWLGTFDTAEEAACAYDCAARAMRGLKARTNF 113          
BLAST of EY665669 vs. ExPASy Swiss-Prot
Match: ERF21_ARATH (Ethylene-responsive transcription factor ERF021 OS=Arabidopsis thaliana GN=ERF021 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 7.127e-14
Identity = 39/71 (54.93%), Postives = 51/71 (71.83%), Query Frame = 2
Query:  284 YRGVRRRPWGKYAAEIRDPARKGSRVWLGTFDSDVDAAKAYDSAAFRMRGRKAILNFPLEAGADSPPAKNS 496
            YRGVR+R WGK+ +EIR+P  K +R+WLG+F++   AA AYD AAF  RGR+A LNFP  A +   PA +S
Sbjct:   24 YRGVRKRKWGKWVSEIREPGTK-NRIWLGSFETPEMAATAYDVAAFHFRGREARLNFPELASSLPRPADSS 93          
BLAST of EY665669 vs. ExPASy Swiss-Prot
Match: ERF54_ARATH (Ethylene-responsive transcription factor ERF054 OS=Arabidopsis thaliana GN=ERF054 PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 9.308e-14
Identity = 37/60 (61.67%), Postives = 45/60 (75.00%), Query Frame = 2
Query:  278 KHYRGVRRRPWGKYAAEIRDPARKGSRVWLGTFDSDVDAAKAYDSAAFRMRGRKAILNFP 457
            K YRGVR+R WGK+ AEIR P R  +R+WLGTFD+  +AA AYD  AF++RG  A LNFP
Sbjct:  141 KLYRGVRQRQWGKWVAEIRKP-RSRARLWLGTFDTAEEAAMAYDRQAFKLRGHSATLNFP 199          
BLAST of EY665669 vs. ExPASy Swiss-Prot
Match: ERF23_ARATH (Ethylene-responsive transcription factor ERF023 OS=Arabidopsis thaliana GN=ERF023 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.588e-13
Identity = 39/68 (57.35%), Postives = 48/68 (70.59%), Query Frame = 2
Query:  260 ADTEERKHYRGVRRRPWGKYAAEIRDPARKGSRVWLGTFDSDVDAAKAYDSAAFRMRGRKAILNFPLE 463
            + T     Y GVR+R WGK+ +EIR+P RK SR+WLG+F     AAKAYD AAF ++GRKA LNFP E
Sbjct:   37 SSTTRHPVYHGVRKRRWGKWVSEIREP-RKKSRIWLGSFPVPEMAAKAYDVAAFCLKGRKAQLNFPEE 103          
BLAST of EY665669 vs. ExPASy Swiss-Prot
Match: RAP29_ARATH (Ethylene-responsive transcription factor RAP2-9 OS=Arabidopsis thaliana GN=RAP2-9 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 2.074e-13
Identity = 41/84 (48.81%), Postives = 55/84 (65.48%), Query Frame = 2
Query:  224 TESPQKRSEPKLADTEERKHYRGVRRRPWGKYAAEIRDPARKGSRVWLGTFDSDVDAAKAYDSAAFRMRGRKAILNFPLEAGAD 475
            TE P++     L  + E K Y+G+R R WGK+ AEIR+P  K SR+WLG++ + V AA+AYD+A F +RG  A LNFP E   D
Sbjct:   21 TEKPKRN----LISSNE-KRYKGIRMRKWGKWVAEIREP-NKRSRIWLGSYKTAVAAARAYDTAVFYLRGPSARLNFPEEVFKD 98          
BLAST of EY665669 vs. ExPASy Swiss-Prot
Match: ERF42_ARATH (Ethylene-responsive transcription factor ERF042 OS=Arabidopsis thaliana GN=ERF042 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 2.074e-13
Identity = 40/78 (51.28%), Postives = 53/78 (67.95%), Query Frame = 2
Query:  224 TESPQKRSEPKLADTEERKHYRGVRRRPWGKYAAEIRDPARKGSRVWLGTFDSDVDAAKAYDSAAFRMRGRKAILNFP 457
            TE   K+ + K   T+E+  YRG R R WGK+ +EIR+P RK SR+WLGTF +   AA+A+D AA  ++G  AILNFP
Sbjct:    9 TECSSKKKKEK---TKEKGVYRGARMRSWGKWVSEIREP-RKKSRIWLGTFPTAEMAARAHDVAALSIKGSSAILNFP 82          
BLAST of EY665669 vs. ExPASy Swiss-Prot
Match: ERF55_ARATH (Ethylene-responsive transcription factor ERF055 OS=Arabidopsis thaliana GN=ERF055 PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.708e-13
Identity = 38/60 (63.33%), Postives = 46/60 (76.67%), Query Frame = 2
Query:  278 KHYRGVRRRPWGKYAAEIRDPARKGSRVWLGTFDSDVDAAKAYDSAAFRMRGRKAILNFP 457
            K YRGVR+R WGK+ AEIR P R  +R+WLGTFD+  +AA AYD AAF++RG  A LNFP
Sbjct:  141 KLYRGVRQRHWGKWVAEIRLP-RNRTRLWLGTFDTAEEAALAYDRAAFKLRGDSARLNFP 199          
BLAST of EY665669 vs. ExPASy Swiss-Prot
Match: ERF62_ARATH (Ethylene-responsive transcription factor ERF062 OS=Arabidopsis thaliana GN=ERF062 PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.537e-13
Identity = 40/82 (48.78%), Postives = 54/82 (65.85%), Query Frame = 2
Query:  212 SSNWTESPQKRSEPKLADTEERKHYRGVRRRPWGKYAAEIRDPARKGSRVWLGTFDSDVDAAKAYDSAAFRMRGRKAILNFP 457
            S+  T+  + ++   +  T   K YRGVR+R WGK+ AEIR P R  +RVWLGTF++   AA AYD+AA+ +RG  A LNFP
Sbjct:  208 STTKTQPMKSKTRKVVQTTTPTKLYRGVRQRHWGKWVAEIRLP-RNRTRVWLGTFETAEQAAMAYDTAAYILRGEFAHLNFP 288          
BLAST of EY665669 vs. ExPASy Swiss-Prot
Match: ERF37_ARATH (Ethylene-responsive transcription factor ERF037 OS=Arabidopsis thaliana GN=ERF037 PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.537e-13
Identity = 42/100 (42.00%), Postives = 58/100 (58.00%), Query Frame = 2
Query:  284 YRGVRRRPWGKYAAEIRDPARKGSRVWLGTFDSDVDAAKAYDSAAFRMRGRKAILNFP-----LEAGADSPPAKNSRKRRREKTLDLQESTISII*KNKT 568
            YRGVR R WGK+ +EIR+P RK SR+WLGTF +   AA+A+D+AA  ++G  A+LNFP     L   A S P            +D   S+ S++  + T
Sbjct:   43 YRGVRMRTWGKWVSEIREP-RKKSRIWLGTFSTPEMAARAHDAAALTIKGTSAVLNFPELATYLPRPASSSPRDVQAAAAVAAAMDFSPSSSSLVVSDPT 141          
The following BLAST results are available for this feature:
BLAST of EY665669 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 111
Match NameE-valueIdentityDescription
CRF4_ARATH5.457e-1442.22Ethylene-responsive transcription factor CRF4 OS=A... [more]
ESR2_ARATH7.127e-1470.18Ethylene-responsive transcription factor ESR2 OS=A... [more]
ERF21_ARATH7.127e-1454.93Ethylene-responsive transcription factor ERF021 OS... [more]
ERF54_ARATH9.308e-1461.67Ethylene-responsive transcription factor ERF054 OS... [more]
ERF23_ARATH1.588e-1357.35Ethylene-responsive transcription factor ERF023 OS... [more]
RAP29_ARATH2.074e-1348.81Ethylene-responsive transcription factor RAP2-9 OS... [more]
ERF42_ARATH2.074e-1351.28Ethylene-responsive transcription factor ERF042 OS... [more]
ERF55_ARATH2.708e-1363.33Ethylene-responsive transcription factor ERF055 OS... [more]
ERF62_ARATH3.537e-1348.78Ethylene-responsive transcription factor ERF062 OS... [more]
ERF37_ARATH3.537e-1342.00Ethylene-responsive transcription factor ERF037 OS... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-102-092-C08-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665669 ID=EY665669; Name=EY665669; organism=Citrus sinensis; type=EST; length=892bp
CATGTCCACATGACAACGCCTGTAAGAAGAATCATCCATCCTGGAATTCA
TTCGCCAGTTTCTTCTCGGAGACTTTACCTCCTTAGACGACCCAAATCTC
TCTTTTCTCCAGCCTATGGAGTCAGAATTCCCTGTGATCAAATCCGAACC
CGACTCCCCCACCTTTTGTGAAATAATAAAACCTGAACCATTGGACATAA
CGTGTTTGGGTTCCAGTAATTGGACAGAATCACCTCAAAAGCGTTCGGAG
CCGAAGCTGGCGGACACTGAAGAGAGGAAGCATTACAGGGGAGTAAGAAG
AAGGCCGTGGGGCAAGTATGCGGCTGAAATCCGGGACCCGGCAAGAAAGG
GCAGCAGGGTTTGGTTGGGAACTTTTGATAGTGATGTTGATGCTGCTAAA
GCTTATGATTCTGCTGCCTTCCGGATGAGGGGTCGCAAAGCAATCTTGAA
TTTCCCTCTGGAGGCTGGAGCTGATAGCCCTCCAGCAAAGAACAGTAGGA
AAAGAAGAAGAGAGAAGACACTGGATTTGCAAGAATCAACCATCTCAATT
ATCTAGAAAAATAAGACCCTTCTCAGATTCAGGACCCCTCAATGTATATG
TGCTGTTATTACTCTTANGAAATATGTAATTTGCTCCCAAGAAAAAAAAA
GGTGTCTTGGGTTTCCAGTTATAAAGTTGACTGGGTGCCAGCTCAAAACT
CAGAATCGGGAATATTCCCGGGTAATCGGAACAAAAAAATAATATTGTAA
CTTGAACATTAGTAAAATTTGCAGTTGGCAAAAGGGACTTTGGGAAAAAA
ATAAATCCATGGAAGTTCCTTGAATGGTTGGCTTTTTTGATTTTTTTTTT
TAAAAAAAAAAAAAAAAGAAAAAAAAAAAAAAAAAAAAAAAA
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