EY665669

Overview
NameEY665669
Unique NameEY665669
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length892
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665669 vs. ExPASy Swiss-Prot
Match: ERF39_ARATH (Ethylene-responsive transcription factor ERF039 OS=Arabidopsis thaliana GN=ERF039 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 6.670e-12
Identity = 38/83 (45.78%), Postives = 54/83 (65.06%), Query Frame = 2
Query:  209 GSSNWTESPQKRSEPKLADTEERKHYRGVRRRPWGKYAAEIRDPARKGSRVWLGTFDSDVDAAKAYDSAAFRMRGRKAILNFP 457
            G S+ T++ QK          ++ ++RGVR R WGK+ +EIR+P RK SR+WLGTF +   AA+A+D AA  ++G  A LNFP
Sbjct:   22 GKSSKTKNEQK-------GVSKQPNFRGVRMRQWGKWVSEIREP-RKKSRIWLGTFSTPEMAARAHDVAALAIKGGSAHLNFP 96          
BLAST of EY665669 vs. ExPASy Swiss-Prot
Match: ERF08_ARATH (Ethylene-responsive transcription factor ERF008 OS=Arabidopsis thaliana GN=ERF008 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 8.712e-12
Identity = 33/60 (55.00%), Postives = 44/60 (73.33%), Query Frame = 2
Query:  278 KHYRGVRRRPWGKYAAEIRDPARKGSRVWLGTFDSDVDAAKAYDSAAFRMRGRKAILNFP 457
            K Y+G+R R WGK+ AEIR+P  K SR+WLG++ +   AA+AYD+A F +RG  A LNFP
Sbjct:   26 KPYKGIRMRKWGKWVAEIREP-NKRSRIWLGSYATPEAAARAYDTAVFYLRGPSARLNFP 84          
BLAST of EY665669 vs. ExPASy Swiss-Prot
Match: DRE2A_ARATH (Dehydration-responsive element-binding protein 2A OS=Arabidopsis thaliana GN=DREB2A PE=1 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 8.712e-12
Identity = 37/61 (60.66%), Postives = 44/61 (72.13%), Query Frame = 2
Query:  275 RKHYRGVRRRPWGKYAAEIRDPARKGSRVWLGTFDSDVDAAKAYDSAAFRMRGRKAILNFP 457
            R  +RGVR+R WGK+ AEIR+P R GSR+WLGTF +  +AA AYD AA  M G  A LNFP
Sbjct:   76 RCSFRGVRQRIWGKWVAEIREPNR-GSRLWLGTFPTAQEAASAYDEAAKAMYGPLARLNFP 135          
BLAST of EY665669 vs. ExPASy Swiss-Prot
Match: DRE1B_ARATH (Dehydration-responsive element-binding protein 1B OS=Arabidopsis thaliana GN=DREB1B PE=2 SV=2)

HSP 1 Score: 71.2478 bits (173), Expect = 8.712e-12
Identity = 44/110 (40.00%), Postives = 62/110 (56.36%), Query Frame = 2
Query:  224 TESPQKRSEPKLADTEERKHYRGVRRRPWGKYAAEIRDPARKGSRVWLGTFDSDVDAAKAYDSAAFRMRGRKAILNFPLEAG----ADSPPAKNSRKRRREKTLDLQEST 541
            T  P+K +  K         YRGVR+R  GK+ +E+R+P +K +R+WLGTF +   AA+A+D AA  +RGR A LNF   A      +S  AK+ +K   E  L  Q+ T
Sbjct:   28 TSCPKKPAGRKKFRETRHPIYRGVRQRNSGKWVSEVREPNKK-TRIWLGTFQTAEMAARAHDVAALALRGRSACLNFADSAWRLRIPESTCAKDIQKAAAEAALAFQDET 136          
BLAST of EY665669 vs. ExPASy Swiss-Prot
Match: DRE2G_ARATH (Dehydration-responsive element-binding protein 2G OS=Arabidopsis thaliana GN=DREB2G PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.138e-11
Identity = 33/56 (58.93%), Postives = 45/56 (80.36%), Query Frame = 2
Query:  284 YRGVRRRPWGKYAAEIRDPARKGSRVWLGTFDSDVDAAKAYDSAAFRMRGRKAILN 451
            +RGVR+R WGK+ AEIR+P R G+R+WLGTF++ V+AA AYD AA ++ G +A LN
Sbjct:   34 FRGVRQRTWGKWVAEIREPNR-GTRLWLGTFNTSVEAAMAYDEAAKKLYGHEAKLN 88          
BLAST of EY665669 vs. ExPASy Swiss-Prot
Match: DRE2F_ARATH (Dehydration-responsive element-binding protein 2F OS=Arabidopsis thaliana GN=DREB2F PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.138e-11
Identity = 35/73 (47.95%), Postives = 48/73 (65.75%), Query Frame = 2
Query:  284 YRGVRRRPWGKYAAEIRDPARKGSRVWLGTFDSDVDAAKAYDSAAFRMRGRKAILNFPLEAGADSPPAKNSRK 502
            YRGVR+R WGK+ AEIR+P +K +R+WLG+F +  +AA AYD AA ++ G  A LN P       P   NS++
Sbjct:   28 YRGVRQRTWGKWVAEIREP-KKRARLWLGSFATAEEAAMAYDEAALKLYGHDAYLNLPHLQRNTRPSLSNSQR 99          
BLAST of EY665669 vs. ExPASy Swiss-Prot
Match: ERF11_ARATH (Ethylene-responsive transcription factor ERF011 OS=Arabidopsis thaliana GN=ERF011 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.486e-11
Identity = 38/102 (37.25%), Postives = 58/102 (56.86%), Query Frame = 2
Query:  269 EERKHYRGVRRRPWGKYAAEIRDPARKGSRVWLGTFDSDVDAAKAYDSAAFRMRGRKAILNFPLE---AGADSPPAKNSRKRRREKTLDLQESTISII*KNK 565
            +  + ++G+R R WGK+ AEIR+P  K SR+WLG++ +   AA+AYD+A F +RG  A LNFP       A+   A   RK+  E    +     +++  NK
Sbjct:   16 KRERPFKGIRMRKWGKWVAEIREP-NKRSRLWLGSYSTPEAAARAYDTAVFYLRGPTATLNFPELLPCTSAEDMSAATIRKKATEVGAQVDAIGATVVQNNK 116          
BLAST of EY665669 vs. ExPASy Swiss-Prot
Match: DRE2B_ARATH (Dehydration-responsive element-binding protein 2B OS=Arabidopsis thaliana GN=DREB2B PE=1 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.486e-11
Identity = 35/64 (54.69%), Postives = 45/64 (70.31%), Query Frame = 2
Query:  284 YRGVRRRPWGKYAAEIRDPARKGSRVWLGTFDSDVDAAKAYDSAAFRMRGRKAILNFPLEAGAD 475
            +RGVR+R WGK+ AEIR+P + G+R+WLGTF +   AA AYD AA  M G  A LNFP   G++
Sbjct:   78 FRGVRQRIWGKWVAEIREP-KIGTRLWLGTFPTAEKAASAYDEAATAMYGSLARLNFPQSVGSE 140          
BLAST of EY665669 vs. ExPASy Swiss-Prot
Match: SHN3_ARATH (Ethylene-responsive transcription factor SHINE 3 OS=Arabidopsis thaliana GN=SHN3 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.535e-11
Identity = 38/82 (46.34%), Postives = 49/82 (59.76%), Query Frame = 2
Query:  278 KHYRGVRRRPWGKYAAEIRDPARKGSRVWLGTFDSDVDAAKAYDSAAFRMRGRKAILNFPLEAGADSPPAKNSRKRRREKTL 523
            K +RGVR+R WG + +EIR P  K  RVWLGTFD+   AA+AYD AA  M G+ A  NFP+     S   + +   R  K+L
Sbjct:    5 KKFRGVRQRQWGSWVSEIRHPLLK-RRVWLGTFDTAETAARAYDQAAVLMNGQSAKTNFPVIKSNGSNSLEINSALRSPKSL 85          
BLAST of EY665669 vs. ExPASy Swiss-Prot
Match: ERF88_ARATH (Ethylene-responsive transcription factor ERF088 OS=Arabidopsis thaliana GN=ERF088 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.535e-11
Identity = 40/75 (53.33%), Postives = 47/75 (62.67%), Query Frame = 2
Query:  242 RSEPKLADTEERK----HYRGVRRRPWGKYAAEIRDPARKGSRVWLGTFDSDVDAAKAYDSAAFRMRGRKAILNF 454
            +S  K    EE+K     Y GVRRRPWG+YAAEIR+P  K  R WLGTFD+  +AA AYD AA  + G  A  NF
Sbjct:    3 KSSNKRKSKEEKKLQEGKYLGVRRRPWGRYAAEIRNPFTK-ERHWLGTFDTAEEAAFAYDVAARSISGSLATTNF 76          
The following BLAST results are available for this feature:
BLAST of EY665669 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 111
Match NameE-valueIdentityDescription
ERF39_ARATH6.670e-1245.78Ethylene-responsive transcription factor ERF039 OS... [more]
ERF08_ARATH8.712e-1255.00Ethylene-responsive transcription factor ERF008 OS... [more]
DRE2A_ARATH8.712e-1260.66Dehydration-responsive element-binding protein 2A ... [more]
DRE1B_ARATH8.712e-1240.00Dehydration-responsive element-binding protein 1B ... [more]
DRE2G_ARATH1.138e-1158.93Dehydration-responsive element-binding protein 2G ... [more]
DRE2F_ARATH1.138e-1147.95Dehydration-responsive element-binding protein 2F ... [more]
ERF11_ARATH1.486e-1137.25Ethylene-responsive transcription factor ERF011 OS... [more]
DRE2B_ARATH1.486e-1154.69Dehydration-responsive element-binding protein 2B ... [more]
SHN3_ARATH2.535e-1146.34Ethylene-responsive transcription factor SHINE 3 O... [more]
ERF88_ARATH2.535e-1153.33Ethylene-responsive transcription factor ERF088 OS... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-102-092-C08-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665669 ID=EY665669; Name=EY665669; organism=Citrus sinensis; type=EST; length=892bp
CATGTCCACATGACAACGCCTGTAAGAAGAATCATCCATCCTGGAATTCA
TTCGCCAGTTTCTTCTCGGAGACTTTACCTCCTTAGACGACCCAAATCTC
TCTTTTCTCCAGCCTATGGAGTCAGAATTCCCTGTGATCAAATCCGAACC
CGACTCCCCCACCTTTTGTGAAATAATAAAACCTGAACCATTGGACATAA
CGTGTTTGGGTTCCAGTAATTGGACAGAATCACCTCAAAAGCGTTCGGAG
CCGAAGCTGGCGGACACTGAAGAGAGGAAGCATTACAGGGGAGTAAGAAG
AAGGCCGTGGGGCAAGTATGCGGCTGAAATCCGGGACCCGGCAAGAAAGG
GCAGCAGGGTTTGGTTGGGAACTTTTGATAGTGATGTTGATGCTGCTAAA
GCTTATGATTCTGCTGCCTTCCGGATGAGGGGTCGCAAAGCAATCTTGAA
TTTCCCTCTGGAGGCTGGAGCTGATAGCCCTCCAGCAAAGAACAGTAGGA
AAAGAAGAAGAGAGAAGACACTGGATTTGCAAGAATCAACCATCTCAATT
ATCTAGAAAAATAAGACCCTTCTCAGATTCAGGACCCCTCAATGTATATG
TGCTGTTATTACTCTTANGAAATATGTAATTTGCTCCCAAGAAAAAAAAA
GGTGTCTTGGGTTTCCAGTTATAAAGTTGACTGGGTGCCAGCTCAAAACT
CAGAATCGGGAATATTCCCGGGTAATCGGAACAAAAAAATAATATTGTAA
CTTGAACATTAGTAAAATTTGCAGTTGGCAAAAGGGACTTTGGGAAAAAA
ATAAATCCATGGAAGTTCCTTGAATGGTTGGCTTTTTTGATTTTTTTTTT
TAAAAAAAAAAAAAAAAGAAAAAAAAAAAAAAAAAAAAAAAA
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