EL492485

Overview
NameEL492485
Unique NameEL492485
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length195
Libraries
Library NameType
Citrus sinensis flesh cDNA-AFLP Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EL492485 vs. ExPASy Swiss-Prot
Match: UBC2_CANAL (Ubiquitin-conjugating enzyme E2 2 OS=Candida albicans GN=UBC2 PE=2 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 9.871e-11
Identity = 26/55 (47.27%), Postives = 40/55 (72.73%), Query Frame = 1 
Query:   16 STIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDIL 180
            + I+GPSD+P+  G F + + F   YP KPP+V F +++FHPN+ ++G +CLDIL
Sbjct:   38 AVIIGPSDTPFEDGTFRLLLSFDEQYPNKPPQVKFISEMFHPNVYASGELCLDIL 92
The following BLAST results are available for this feature:
BLAST of EL492485 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 121
Match NameE-valueIdentityDescription
UBC2_CANAL9.871e-1147.27Ubiquitin-conjugating enzyme E2 2 OS=Candida albic... [more]

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Properties
Property NameValue
Genbank descriptionC1180 Citrus sinensis flesh cDNA-AFLP Library Citrus sinensis cDNA clone ClC1180, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EL492485 ID=EL492485; Name=EL492485; organism=Citrus sinensis; type=EST; length=195bp
CATGTTCCACTGGCAAGCACAATTATGGGCCCTTCTGATAGCCCATATGC
AGGAGGTGTATTTTTGGTTACCATTCATTTTCCTCCTGATTATCCNTTCA
AGCCCCCAAAGGTTGCTTTTAGGACCAAGGTCTTCCACCCGAACATCAAC
AGCAATGGAAGCATCTGTCTTGATATCCTTACTNCAGGACTCATC
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