CV887122

Overview
NameCV887122
Unique NameCV887122
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length825
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV887122 vs. ExPASy Swiss-Prot
Match: GLO2C_ARATH (Hydroxyacylglutathione hydrolase cytoplasmic OS=Arabidopsis thaliana GN=GLX2-2 PE=1 SV=2)

HSP 1 Score: 75.8702 bits (185), Expect = 3.140e-13
Identity = 50/157 (31.85%), Postives = 82/157 (52.23%), Query Frame = -1
Query:  364 LIDPVDKTVDRDLNVIKELGLKLVYAMNTHVHADHVTGTGLIKSKVPGVXXXXXXXXXXXADLH-VEHGDKVSFG-DLFLEVRATPGHTLGCVTY-VSGEGPDQPQPRMAFTGDALLIRGCGRTDFQGGSSSQLYKSVHSQIFTLPKDTLIYPAHDY 825
            ++DPVD   ++ +   ++   K+ + + TH H DH  G   IK  VP +                V++GDK++ G D+ +    TP HT G ++Y V+G+  + P     FTGD L + GCG+  F  G++ Q+Y+S+   +  LPK T +Y  H+Y
Sbjct:   27 VVDPVDP--EKVIASAEKHQAKIKFVLTTHHHWDHAGGNEKIKQLVPDIKVYGGSLDKVKGCTDAVDNGDKLTLGQDINILALHTPCHTKGHISYYVNGKEGENPA---VFTGDTLFVAGCGK--FFEGTAEQMYQSLCVTLAALPKPTQVYCGHEY 176          
BLAST of CV887122 vs. ExPASy Swiss-Prot
Match: GLO2_RAT (Hydroxyacylglutathione hydrolase, mitochondrial OS=Rattus norvegicus GN=Hagh PE=1 SV=2)

HSP 1 Score: 75.485 bits (184), Expect = 4.101e-13
Identity = 44/154 (28.57%), Postives = 72/154 (46.75%), Query Frame = -1
Query:  364 LIDPVDKTVDRDLNVIKELGLKLVYAMNTHVHADHVTGTGLIKSKVPGVXXXXXXXXXXXADLHVEHGDKVSFGDLFLEVRATPGHTLGCVTYVSGEGPDQPQPRMAFTGDALLIRGCGRTDFQGGSSSQLYKSVHSQIFTLPKDTLIYPAHDY 825
            ++DPV     + +  +K+  +KL   + TH H DH  G   +    PG+               V H   +  G L ++  +TP HT G + Y   + P   +P   FTGD L + GCG+  F  G++ ++YK++   +  LP DT +   H+Y
Sbjct:   76 VVDPVQP--QKVIETVKKHRVKLTTVLTTHHHWDHAGGNEKLVKLEPGLKVYGGDDRIGALTHKVTHLSTLEVGSLSVKCLSTPCHTSGHICYFVSK-PGSSEPSAVFTGDTLFVAGCGK--FYEGTADEMYKALLEVLGRLPPDTKVICGHEY 224          
BLAST of CV887122 vs. ExPASy Swiss-Prot
Match: GLO2_XENTR (Hydroxyacylglutathione hydrolase, mitochondrial OS=Xenopus tropicalis GN=hagh PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 6.995e-13
Identity = 44/154 (28.57%), Postives = 72/154 (46.75%), Query Frame = -1
Query:  364 LIDPVDKTVDRDLNVIKELGLKLVYAMNTHVHADHVTGTGLIKSKVPGVXXXXXXXXXXXADLHVEHGDKVSFGDLFLEVRATPGHTLGCVTYVSGEGPDQPQPRMAFTGDALLIRGCGRTDFQGGSSSQLYKSVHSQIFTLPKDTLIYPAHDY 825
            ++DPV     + ++ +K+ G+KL   + TH H DH  G   +   V G+               V H      G L ++   TP HT G + Y   + P+  +P   FTGD L + GCG+  F  G+  ++Y ++   +  LP +T +Y  H+Y
Sbjct:   80 IVDPVQP--QKVVDAVKKHGVKLTTVLTTHHHWDHAGGNEKLVKMVSGLKVYGGDSRIGALTQKVSHLTTFQVGSLHVKCLYTPCHTSGHICYYVTK-PNSTEPPAVFTGDTLFVAGCGK--FFEGTPEEMYAALIEVLGRLPPETRVYCGHEY 228          
BLAST of CV887122 vs. ExPASy Swiss-Prot
Match: GLO2_DANRE (Hydroxyacylglutathione hydrolase, mitochondrial OS=Danio rerio GN=hagh PE=2 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 9.136e-13
Identity = 44/154 (28.57%), Postives = 75/154 (48.70%), Query Frame = -1
Query:  364 LIDPVDKTVDRDLNVIKELGLKLVYAMNTHVHADHVTGTGLIKSKVPGVXXXXXXXXXXXADLHVEHGDKVSFGDLFLEVRATPGHTLGCVTYVSGEGPDQPQPRMAFTGDALLIRGCGRTDFQGGSSSQLYKSVHSQIFTLPKDTLIYPAHDY 825
            ++DPV+    + ++ +K+ G+KL   + TH H DH  G   +   +PG+               V H +    G L ++   TP HT G + Y   +      P + FTGD L + GCG+  F  G++ ++YK++   +  LP +T +Y  H+Y
Sbjct:   70 IVDPVEP--QKVVDAVKKHGVKLKTVLTTHHHWDHAGGNEKLVKLMPGLTVYGGDDRVGALTQKVTHYNTFKVGSLNVKCLFTPCHTSGHICYFVTKENSTEAPAV-FTGDTLFVAGCGK--FFEGTADEMYKALIEVLGRLPPETRVYCGHEY 218          
BLAST of CV887122 vs. ExPASy Swiss-Prot
Match: GLO2_RHIME (Hydroxyacylglutathione hydrolase OS=Rhizobium meliloti GN=gloB PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.193e-12
Identity = 55/184 (29.89%), Postives = 83/184 (45.11%), Query Frame = -1
Query:  292 LNVIKELGLKLVYAMNTHVHADHVTGTGLIK--------------SKVPGVXXXXXXXXXXXADLHVEHGDKVSFGDLFLEVRATPGHTLGCVTYVSGEGPDQPQPRMAFTGDALLIRGCGRTDFQGGSSSQLYKSVHSQIFTLPKDTLIYPAHDY----KGFTVSTVGEEIQYNPRLTKDEET 789
            L+ ++  G +L + + TH H DHV     +K              SK+PG+            D  V HGD+  F    ++V  TPGHT G V Y        P+ ++ F  D L   GCGR  F+ G++  +++S+ S++  LP DT IY  H+Y      F ++   E      R  + EET
Sbjct:   40 LDALERRGWQLTHILTTHHHGDHVAANASLKERFGLTIIGPKNEASKIPGI------------DRTVGHGDRFDFAGHPVDVIETPGHTSGHVCY------HLPEDKLLFAADTLFALGCGRL-FE-GTADTMWQSL-SRLMALPDDTAIYFGHEYTLANAHFAITVDPENSALKERAAEIEET 202          
BLAST of CV887122 vs. ExPASy Swiss-Prot
Match: GLO2_PHOPR (Hydroxyacylglutathione hydrolase OS=Photobacterium profundum GN=gloB PE=3 SV=2)

HSP 1 Score: 73.9442 bits (180), Expect = 1.193e-12
Identity = 62/179 (34.64%), Postives = 88/179 (49.16%), Query Frame = -1
Query:  295 LIDPVDKTVDRDLNVIKELGLKLVYAMNTHVHADHVTGTGLIKSKVPGVXXXXXXXXXXXA-DLHVEHGDKVS-FGDLFLEVRATPGHTLGCVTYVSGEGPDQPQPRMAFTGDALLIRGCGRTDFQGGSSSQLYKSVHSQIFTLPKDTLIYPAHDYKGFTVSTVGEEIQYNPRLTKDEE 825
            ++DP D T    L V++E  L L   + TH H DH+ G   +K   P +                VE GD+V  FG+ F+ V   PGHTLG V YV G+G         F GD L   GCGR  F+ G+ +Q+++S+  ++  LP +T IY AH+Y    ++      Q NP L +  E
Sbjct:   27 VVDPGDATPV--LKVLEEQSLTLDAILITHHHHDHIGGISELKRHYPNLNVVGPASEPIPGISQSVEDGDQVELFGERFM-VLGVPGHTLGHVAYV-GDG-------KLFCGDTLFSVGCGRL-FE-GTPAQMFQSL-KKLAALPDETEIYCAHEYTSSNLAFALVAEQDNPHLQRYRE 191          
BLAST of CV887122 vs. ExPASy Swiss-Prot
Match: GLO2_OCHA4 (Hydroxyacylglutathione hydrolase OS=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) GN=gloB PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.193e-12
Identity = 49/141 (34.75%), Postives = 71/141 (50.35%), Query Frame = -1
Query:  364 IKELGLKLVYAMNTHVHADHVTGTGLIKSK--VPGVXXXXXXXXXXXADLHVEHGDKVSFGDLFLEVRATPGHTLGCVTYVSGEGPDQPQPRMAFTGDALLIRGCGRTDFQGGSSSQLYKSVHSQIFTLPKDTLIYPAHDY 780
            +K  G  L +   TH H DHV G   +K+K  V  +            D  V+ GD+ +FG   ++V ATPGHT G V+Y        P  +  FTGD L   GCGR  F+ G+   +++S+  ++  LP DT +Y  H+Y
Sbjct:   47 LKRRGWTLDFIFTTHHHLDHVEGNEALKAKYGVSIIGPKAEETKIPGIDRTVKDGDEFTFGLFRVKVIATPGHTAGEVSYY------LPDAKAVFTGDTLFALGCGRL-FE-GTPLTMFQSL-QKLVALPGDTAVYCGHEY 178          
BLAST of CV887122 vs. ExPASy Swiss-Prot
Match: GLO2_MARMM (Hydroxyacylglutathione hydrolase OS=Maricaulis maris (strain MCS10) GN=gloB PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.193e-12
Identity = 53/151 (35.10%), Postives = 73/151 (48.34%), Query Frame = -1
Query:  364 TVDRD--LNVIKELGLKLVYAMNTHVHADHVTGTGLIKSKVPG--VXXXXXXXXXXXADLHVEHGDKVSFGDLFLEVRATPGHTLGCVTYVSGEGPDQPQPRMAFTGDALLIRGCGRTDFQGGSSSQLYKSVHSQIFTLPKDTLIYPAHDY 804
            T D D  LN   + G  +    NTH H DH  G   I++      V             + VE GD +S GD   +V  TPGHT+G V Y        P   +AF GD L   GCGR  F+ G+ ++++ S+ S++  LP +T IY AH+Y
Sbjct:   33 TPDADVILNEADQAGWSITQIWNTHHHFDHAGGNETIQALTGAKVVAPRYDRHRIPGISMEVEDGDVISLGDHKAKVFYTPGHTMGHVCY------HMPMDGIAFVGDTLFALGCGRL-FE-GTPAEMWHSL-SRLAALPDETRIYCAHEY 174          
BLAST of CV887122 vs. ExPASy Swiss-Prot
Match: GLO2_DICDI (Hydroxyacylglutathione hydrolase OS=Dictyostelium discoideum GN=hagh PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.193e-12
Identity = 49/176 (27.84%), Postives = 78/176 (44.32%), Query Frame = -1
Query:  244 LKLVYAMNTHVHADHVTGTGLIKSKVPGVXXXXXXXXXXXADLHVEHGDKVSFGDLFLEVRATPGHTLGCVTYVSGEGPDQPQPRMAFTGDALLIRGCGRTDFQGGSSSQLYKSVHSQIFTLPKDTLIYPAHDY--KGFTVSTVGEEIQYNPRLTKDEETFKSIMENLNLSYPKMI 765
            +K+     TH H DH  G  LIK+ +  +               +E+ + +  G L ++    P HT   V Y+  +  +  Q +  FTGD L I GCGR  F+ G+  Q+Y ++++ I  LP +TL+Y  H+Y  K    +   E    N  L    +  K  + N   + P  I
Sbjct:   47 IKINSVFTTHHHWDHAGGNNLIKTIIKDINVYGRDERFEGITKKLENNEVLKIGSLKIKTLDAPAHTSSHVLYLIEDENEPNQVKSLFTGDTLFIGGCGRL-FE-GNPEQMYNALYNVIGKLPDNTLVYVGHEYTLKNLEFAKTLESENENKELYNFYDQCKEKLANGEFTVPSSI 220          
BLAST of CV887122 vs. ExPASy Swiss-Prot
Match: BLH_XYLFT (Beta-lactamase hydrolase-like protein OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) GN=blh PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.035e-12
Identity = 64/224 (28.57%), Postives = 98/224 (43.75%), Query Frame = -1
Query:  211 DRDLNVIKELGLKLVYAMNTHVHADHVTGTGLIKSKVPG------------------VXXXXXXXXXXXADLHVEHGDKVSFGDLFLEVRATPGHTLGCVTYVSGEGPDQPQPRMAFTGDALLI--RGCGRTDFQGGSSSQLYKSVHSQIFTLPKDTLIYPAHDYKGF-----TVSTVGEEIQYNPRLT-KDEETFKSIME--NLNLSYPKMIDIAVPANLVCG 798
            D  L  +++ GL + + ++TH HADH +    +K +                                  D     GD  + G +   V  +PGHTL  VTYV G+         AF  D + +   G  R DF GGS+  L+ S+ + I +LP +T ++  HDY+         STVGE+ + N  L   DE TF ++ E  +  L  PK+I  A+  N++ G
Sbjct:  192 DAILAHVEQQGLTVEWILDTHPHADHFSAAQYLKQRTGAPTAIGTHVTKVQRLWREIYNLPTLSTNGSQWDHLFADGDVFNVGSIKGRVMFSPGHTLASVTYVIGD--------TAFVHDTIFMPDSGTARADFPGGSARALWSSIQA-ILSLPDETRLFTGHDYQPSGRHPRWESTVGEQKKANLHLAGVDETTFVALREARDKTLPMPKLILHALQVNVLGG 406          
The following BLAST results are available for this feature:
BLAST of CV887122 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 54
Match NameE-valueIdentityDescription
GLO2C_ARATH3.140e-1331.85Hydroxyacylglutathione hydrolase cytoplasmic OS=Ar... [more]
GLO2_RAT4.101e-1328.57Hydroxyacylglutathione hydrolase, mitochondrial OS... [more]
GLO2_XENTR6.995e-1328.57Hydroxyacylglutathione hydrolase, mitochondrial OS... [more]
GLO2_DANRE9.136e-1328.57Hydroxyacylglutathione hydrolase, mitochondrial OS... [more]
GLO2_RHIME1.193e-1229.89Hydroxyacylglutathione hydrolase OS=Rhizobium meli... [more]
GLO2_PHOPR1.193e-1234.64Hydroxyacylglutathione hydrolase OS=Photobacterium... [more]
GLO2_OCHA41.193e-1234.75Hydroxyacylglutathione hydrolase OS=Ochrobactrum a... [more]
GLO2_MARMM1.193e-1235.10Hydroxyacylglutathione hydrolase OS=Maricaulis mar... [more]
GLO2_DICDI1.193e-1227.84Hydroxyacylglutathione hydrolase OS=Dictyostelium ... [more]
BLH_XYLFT2.035e-1228.57Beta-lactamase hydrolase-like protein OS=Xylella f... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_029C07_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_029_T7_C07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV887122 ID=CV887122; Name=CV887122; organism=Citrus sinensis; type=EST; length=825bp
TATTCATTATATCTTATTTTCATCATTTCACTGATCCATACATTATGTAG
GTGCTTAACAACTTTTTCTTTGTTATTGTTTTGTATTATCCCAATTAAGA
GCCATTGTATATCATTTGTACAGAGTAACTTGAACAGCAGGTACCGAGGT
TATCACCATTTGGGCGTCGCCCAAGGAAGCTCATCAGGCTTTGGAGGTCA
GATCTTGCATTCCACAAACCAAATTTGCCGGAACTGCTATGTCTATCATC
TTTGGATATGACAGGTTTAAATTTTCCATTATGGATTTGAATGTTTCCTC
ATCTTTCGTTAGGCGAGGATTGTACTGAATCTCCTCTCCCACTGTGCTTA
CTGTGAATCCCTTGTAATCATGAGCCGGGTAGATTAATGTGTCCTTCGGC
AAAGTAAATATCTGTGAATGCACTGACTTGTAGAGCTGACTTGAACTTCC
ACCCTGAAAATCAGTCCTCCCGCATCCACGTATCAGTAAGGCATCTCCAG
TGAATGCCATCCTTGGTTGAGGCTGATCAGGTCCTTCACCAGAAACATAG
GTAACACAACCCAACGTATGGCCAGGAGTAGCACGAACCTCAAGGAAGAG
ATCACCGAAAGAGACTTTATCCCCATGTTCAACATGAAGATCAGCCTTGG
AACCACTTGCTTTTGATATAATAGATTTCACTCCCGGAACCTTACTCTTA
ATGAGACCCGTTCCAGTGACATGATCAGCATGTACATGGGTGTTCATGGC
ATATACAAGCTTCAATCCCAGTTCTTTAATAACATTCAGGTCTCTATCAA
CGGTCTTGTCGACAGGGTCAATCAA
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