CV887122

Overview
NameCV887122
Unique NameCV887122
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length825
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV887122 vs. ExPASy Swiss-Prot
Match: GLO2_METNO (Hydroxyacylglutathione hydrolase OS=Methylobacterium nodulans (strain ORS2060 / LMG 21967) GN=gloB PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 8.551e-11
Identity = 49/144 (34.03%), Postives = 62/144 (43.06%), Query Frame = -1
Query:  364 LNVIKELGLKLVYAMNTHVHADHVTGTGLIKSKVPG--VXXXXXXXXXXXADLHVEHGDKVSFGDLFLEVRATPGHTLGCVTYVSGEGPDQPQPRMAFTGDALLIRGCGRTDFQGGSSSQLYKSVHSQIFTLPKDTLIYPAHDY 789
            L  +KE G +L   + TH H DHV G   +K++                  D  V  GD V  G L   V  TPGH    VTY         + R+AF GD L   GCGR          L++S+ S+   LP +T IY  HDY
Sbjct:   38 LRALKETGWRLTDILVTHRHFDHVEGIPEVKARTGARVTAPAKAGDAVPEVDATVREGDVVKVGSLVGTVWETPGHCADHVTYWF------ERERLAFAGDTLFTLGCGRV--MESPPEVLWRSL-SRFLALPDETAIYSGHDY 172          
BLAST of CV887122 vs. ExPASy Swiss-Prot
Match: GLO2_HAHCH (Hydroxyacylglutathione hydrolase OS=Hahella chejuensis (strain KCTC 2396) GN=gloB PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 8.551e-11
Identity = 51/154 (33.12%), Postives = 71/154 (46.10%), Query Frame = -1
Query:  364 LIDPVDKTVDRDLNVIKELGLKLVYAMNTHVHADHVTGTGLIKSKVPGVXXXXXXXXXXXADLHVEHGDKVSFGDLFLEVRATPGHTLGCVTYVSGEGPDQPQPRMAFTGDALLIRGCGRTDFQGGSSSQLYKSVHSQIFTLPKDTLIYPAHDY 825
            ++DP D      L  + E  L L   + TH H DH  G   + +  P               + ++ GD+V  GD  LEV  TPGHTL  ++Y    G     PR+ F GD L   GCGR  F+G  +  + +    ++  LP DT IY AH+Y
Sbjct:   27 VVDPGD--AQPVLRHLAENHLTLRGILITHHHHDHTGGVNELLANHPVPVYGFMRSAIKAITVPLQEGDRVDLGDFSLEVLETPGHTLDHISYF---GDIAGAPRL-FCGDTLFSAGCGRL-FEGDPA--MMRQSLDKLKRLPGDTYIYCAHEY 171          
BLAST of CV887122 vs. ExPASy Swiss-Prot
Match: GLO2_CYAP7 (Hydroxyacylglutathione hydrolase OS=Cyanothece sp. (strain PCC 7424) GN=gloB PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 8.551e-11
Identity = 48/157 (30.57%), Postives = 77/157 (49.04%), Query Frame = -1
Query:  364 LIDPVDKTVDRDLNVIKELGLKLVYAMNTHVHADHVTGTGLIKSKVPGV---XXXXXXXXXXXADLHVEHGDKVSFGDLFLEVRATPGHTLGCVTYVSGEGPDQPQPRMAFTGDALLIRGCGRTDFQGGSSSQLYKSVHSQIFTLPKDTLIYPAHDY 825
            ++DP +   +  L  +K+LG +LV   NTH H DHV     +    P +               ++ ++ GD+V FGD   EV   PGHT   + Y      ++    + F GD +   GCGR  F+ G+ +Q+  S+ S++  LP +T I+ AH+Y
Sbjct:   27 VVDPAEP--EPVLTCLKKLGAELVTIFNTHHHGDHVGANRALIEHFPNLTVYGGEEDRGRIPGQEVFLKEGDRVQFGDRSGEVFFVPGHTRAHIAYYFPPQGEEETGEL-FCGDTIFAGGCGRL-FE-GTPAQMVNSL-SKLRALPDNTRIWCAHEY 177          
BLAST of CV887122 vs. ExPASy Swiss-Prot
Match: GLO2_ANASP (Hydroxyacylglutathione hydrolase OS=Anabaena sp. (strain PCC 7120) GN=gloB PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 8.551e-11
Identity = 49/157 (31.21%), Postives = 77/157 (49.04%), Query Frame = -1
Query:  364 LIDPVDKTVDRDLNVIKELGLKLVYAMNTHVHADHVTGTGLIKSKVPGV---XXXXXXXXXXXADLHVEHGDKVSFGDLFLEVRATPGHTLGCVTYVSGEGPDQPQPRMAFTGDALLIRGCGRTDFQGGSSSQLYKSVHSQIFTLPKDTLIYPAHDY 825
            ++DP +   +  L  + +L  +LV   NTH H DHV G   +  K P V                + ++ GD+V F D   EV   PGHT   + Y      D   P   F GD L   GCGR  F+ G+ +Q+ +S+ +++ +LP++T ++ AH+Y
Sbjct:   27 VVDPAE--AEPVLKQLAQLKAELVAIFNTHHHNDHVGGNQKLIQKFPQVKVYGGAKDQGRIPGQQVFLQPGDRVQFADRVAEVIFVPGHTRAHIAYYFPPQTDD-TPGELFCGDTLFAGGCGRL-FE-GTPAQMVESL-TKLRSLPENTRVWCAHEY 177          
The following BLAST results are available for this feature:
BLAST of CV887122 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 54
Match NameE-valueIdentityDescription
GLO2_METNO8.551e-1134.03Hydroxyacylglutathione hydrolase OS=Methylobacteri... [more]
GLO2_HAHCH8.551e-1133.12Hydroxyacylglutathione hydrolase OS=Hahella chejue... [more]
GLO2_CYAP78.551e-1130.57Hydroxyacylglutathione hydrolase OS=Cyanothece sp.... [more]
GLO2_ANASP8.551e-1131.21Hydroxyacylglutathione hydrolase OS=Anabaena sp. (... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_029C07_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_029_T7_C07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV887122 ID=CV887122; Name=CV887122; organism=Citrus sinensis; type=EST; length=825bp
TATTCATTATATCTTATTTTCATCATTTCACTGATCCATACATTATGTAG
GTGCTTAACAACTTTTTCTTTGTTATTGTTTTGTATTATCCCAATTAAGA
GCCATTGTATATCATTTGTACAGAGTAACTTGAACAGCAGGTACCGAGGT
TATCACCATTTGGGCGTCGCCCAAGGAAGCTCATCAGGCTTTGGAGGTCA
GATCTTGCATTCCACAAACCAAATTTGCCGGAACTGCTATGTCTATCATC
TTTGGATATGACAGGTTTAAATTTTCCATTATGGATTTGAATGTTTCCTC
ATCTTTCGTTAGGCGAGGATTGTACTGAATCTCCTCTCCCACTGTGCTTA
CTGTGAATCCCTTGTAATCATGAGCCGGGTAGATTAATGTGTCCTTCGGC
AAAGTAAATATCTGTGAATGCACTGACTTGTAGAGCTGACTTGAACTTCC
ACCCTGAAAATCAGTCCTCCCGCATCCACGTATCAGTAAGGCATCTCCAG
TGAATGCCATCCTTGGTTGAGGCTGATCAGGTCCTTCACCAGAAACATAG
GTAACACAACCCAACGTATGGCCAGGAGTAGCACGAACCTCAAGGAAGAG
ATCACCGAAAGAGACTTTATCCCCATGTTCAACATGAAGATCAGCCTTGG
AACCACTTGCTTTTGATATAATAGATTTCACTCCCGGAACCTTACTCTTA
ATGAGACCCGTTCCAGTGACATGATCAGCATGTACATGGGTGTTCATGGC
ATATACAAGCTTCAATCCCAGTTCTTTAATAACATTCAGGTCTCTATCAA
CGGTCTTGTCGACAGGGTCAATCAA
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