CV887120
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV887120 vs. ExPASy Swiss-Prot
Match: RL15_ANASP (50S ribosomal protein L15 OS=Anabaena sp. (strain PCC 7120) GN=rplO PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 8.086e-27 Identity = 73/153 (47.71%), Postives = 93/153 (60.78%), Query Frame = -3 Query: 345 NNLGPQPGSXXXXXXXXXGIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAGCTLTVL 803 N++ PQ GS GI+AGQG S G GMRGQKSRSG G R GFEGGQ PLYRRIPKL+G Y +N++ + A EV+LE+L+ G++ + K PLKILG+G+L LN KA AF+ A+ K+EAAG + VL Sbjct: 4 NDVKPQKGSKKRRRRVGRGISAGQGASAGLGMRGQKSRSGSGTRPGFEGGQQPLYRRIPKLKGFP---VVNRKIYTTINVEKL--ADLPANTEVTLESLRAAGILTAA----KGPLKILGNGDLGVALNVKAAAFTGQARSKIEAAGGSCEVL 147
BLAST of CV887120 vs. ExPASy Swiss-Prot
Match: RL15_SYNJA (50S ribosomal protein L15 OS=Synechococcus sp. (strain JA-3-3Ab) GN=rplO PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 1.056e-26 Identity = 71/146 (48.63%), Postives = 90/146 (61.64%), Query Frame = -3 Query: 363 NLGPQPGSXXXXXXXXXGIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAG 800 ++ PQPGS GIAAGQG SCG GMRGQK+R G G R GFEGGQ PLYRR+PKL+ + P+Y +NL+ + A G EVSLE+L G++ + PLKILGDGE+ L +A A + SA+ K+EAAG Sbjct: 5 DIRPQPGSTRRRRRLGRGIAAGQGASCGKGMRGQKARKGGGPRPGFEGGQTPLYRRLPKLKHFP--RYVRRPQYTLINLRAL--AKLPAGSEVSLESLMDLGIVTTNDG----PLKILGDGEVGVPLTIRAAAITPSARAKVEAAG 142
BLAST of CV887120 vs. ExPASy Swiss-Prot
Match: RL15_PROM0 (50S ribosomal protein L15 OS=Prochlorococcus marinus (strain MIT 9301) GN=rplO PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 1.379e-26 Identity = 73/147 (49.66%), Postives = 91/147 (61.90%), Query Frame = -3 Query: 363 NNLGPQPGSXXXXXXXXXGIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAG 803 N L GS GIAAGQG SCGFGMRGQKSRSG R GFEGGQMPLYRR+PKL+ + +NL+ + F + D V+L++L KKGLI + K PLKILG+G+L+ KL +A AF+ AK+K+E AG Sbjct: 6 NTLKSNSGSRKKKLRKGRGIAAGQGASCGFGMRGQKSRSGRPTRPGFEGGQMPLYRRVPKLKHFE---IINQKNFSIINLEKLN--DFKDNDTVNLDSLVKKGLI----FKPKFPLKILGNGKLNVKLKVQAHAFTKVAKQKIEDAG 143
BLAST of CV887120 vs. ExPASy Swiss-Prot
Match: RL15_ANAVT (50S ribosomal protein L15 OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=rplO PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.801e-26 Identity = 72/153 (47.06%), Postives = 92/153 (60.13%), Query Frame = -3 Query: 345 NNLGPQPGSXXXXXXXXXGIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAGCTLTVL 803 N++ PQ GS GI+AGQG S G GMRGQKSRSG G R GFEGGQ PLYRRIPKL+G Y +N++ + A EV+LE+L+ G++ K PLK+LG+G+L LN KA AF+ A+ K+EAAG + VL Sbjct: 4 NDVKPQKGSKKRRRRVGRGISAGQGASAGLGMRGQKSRSGSGTRPGFEGGQQPLYRRIPKLKGFP---VVNRKIYTTINVEKL--ADLPANTEVTLESLRASGILTAV----KGPLKVLGNGDLGVALNVKAAAFTGQARSKIEAAGGSCEVL 147
BLAST of CV887120 vs. ExPASy Swiss-Prot
Match: RL15_PROMP (50S ribosomal protein L15 OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=rplO PE=3 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 3.073e-26 Identity = 75/154 (48.70%), Postives = 93/154 (60.39%), Query Frame = -3 Query: 345 NNLGPQPGSXXXXXXXXXGIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETL-KKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAGCTLTVL 803 N L GS GIAAGQG SCGFGMRGQKSRSG R GFEGGQMPLYRR+PKL+ + VNL + + F E + V++++L KKK L P K PLKILG+GE+ KL +A AF+ AKEK+EAAG + ++ Sbjct: 6 NTLKSNTGSRKKKLRKGRGIAAGQGASCGFGMRGQKSRSGRPTRPGFEGGQMPLYRRVPKLKHFE---IINQKNFSIVNLSKL--SEFKESEVVNIDSLVKKKLLFKP-----KFPLKILGNGEVKVKLKVQAHAFTKVAKEKIEAAGGSCEII 149
BLAST of CV887120 vs. ExPASy Swiss-Prot
Match: RL15_PROMM (50S ribosomal protein L15 OS=Prochlorococcus marinus (strain MIT 9313) GN=rplO PE=3 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 3.073e-26 Identity = 69/140 (49.29%), Postives = 87/140 (62.14%), Query Frame = -3 Query: 345 IAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKD---IEAAGFLE---GDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAGCTLTVL 746 IAAGQG SCGFGMRGQKSRSG R GFEGGQMPLYRR+PKL+ + VN K+ + A E G ++L+TL K G++ K PLK+LG+GEL KL +A AF+ +A+ K+EAAG T +L Sbjct: 26 IAAGQGASCGFGMRGQKSRSGRPTRPGFEGGQMPLYRRVPKLK-----------HFTTVNSKEFTVVNVAALNELKAGSTINLDTLVKNGVVT----SPKYPLKVLGNGELKVKLTIQAAAFTATARSKIEAAGGTCEIL 150
BLAST of CV887120 vs. ExPASy Swiss-Prot
Match: RL15_SYNPW (50S ribosomal protein L15 OS=Synechococcus sp. (strain WH7803) GN=rplO PE=3 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 4.013e-26 Identity = 70/131 (53.44%), Postives = 85/131 (64.89%), Query Frame = -3 Query: 357 IAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLE-GDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAGCT 746 IAAGQG SCGFGMRGQKSRSG R GFEGGQMPLYRR+PKL+ H L + ++ A L+ G VSL++L K G++ K PLKILG+GEL KL +A AF+ SA+ K+EAAG T Sbjct: 25 IAAGQGASCGFGMRGQKSRSGRPTRPGFEGGQMPLYRRVPKLK------HFPLVNPKQFTVVNVSALNDLKAGSTVSLDSLVKDGIVT----SPKHPLKILGNGELKTKLTVQAAAFTASARTKIEAAGGT 145
BLAST of CV887120 vs. ExPASy Swiss-Prot
Match: RL15_PROM9 (50S ribosomal protein L15 OS=Prochlorococcus marinus (strain MIT 9312) GN=rplO1 PE=3 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 4.013e-26 Identity = 73/153 (47.71%), Postives = 94/153 (61.44%), Query Frame = -3 Query: 345 NNLGPQPGSXXXXXXXXXGIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAGCTLTVL 803 N L GS GIAAGQG SCGFGMRGQKSRSG R GFEGGQMPLYRR+PKL+ + +NL ++ F + D V+L++L KKGLI + K PLKILG+G+++ KL +A AF+ AK+K+E AG + +L Sbjct: 6 NTLKSNSGSRKKKLRKGRGIAAGQGASCGFGMRGQKSRSGRPTRPGFEGGQMPLYRRVPKLKHFE---IINQKNFSIINLDKLK--DFNDNDTVNLDSLVKKGLI----FKPKFPLKILGNGKVNVKLTVQAHAFTKVAKQKIEDAGGSCELL 149
BLAST of CV887120 vs. ExPASy Swiss-Prot
Match: RL15_PROMS (50S ribosomal protein L15 OS=Prochlorococcus marinus (strain AS9601) GN=rplO PE=3 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 8.940e-26 Identity = 70/147 (47.62%), Postives = 91/147 (61.90%), Query Frame = -3 Query: 363 NNLGPQPGSXXXXXXXXXGIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAG 803 N L GS GIAAGQG SCGFGMRGQKSRSG R GFEGGQMPLYRR+PKL+ + +NL+ + F + D V++++L KKGLI + K PLKILG+G+++ KL +A +F+ AK+K+E AG Sbjct: 6 NTLKSNSGSRKKKLRKGRGIAAGQGASCGFGMRGQKSRSGRPTRPGFEGGQMPLYRRVPKLKHFE---IINQKNFSIINLEKLN--DFKDNDTVNIDSLVKKGLI----FKPKFPLKILGNGKINVKLKVQAHSFTKVAKQKIEDAG 143
BLAST of CV887120 vs. ExPASy Swiss-Prot
Match: RL15_PROMA (50S ribosomal protein L15 OS=Prochlorococcus marinus GN=rplO PE=3 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 8.940e-26 Identity = 71/148 (47.97%), Postives = 89/148 (60.14%), Query Frame = -3 Query: 363 NNLGPQPGSXXXXXXXXXGIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFL-EGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAG 803 ++L P G+ GIAAGQG SCGFGMRGQKSRSG R GFEGGQMPLYRR+PKL+ H L L ++ + L EG V+L++L K G++ K PLK+LG+G L KL +A AF+ SAK K+E AG Sbjct: 7 DSLKPNKGARKRKTRKGRGIAAGQGASCGFGMRGQKSRSGRPTRPGFEGGQMPLYRRVPKLK------HFPLVNSKSFTLINVASLNSLKEGSTVNLDSLVKTGIVT----SPKYPLKVLGNGNLKVKLVVQAAAFTASAKTKIEGAG 144 The following BLAST results are available for this feature:
BLAST of CV887120 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CV887120 ID=CV887120; Name=CV887120; organism=Citrus sinensis; type=EST; length=805bpback to top |