CV887120
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV887120 vs. ExPASy Swiss-Prot
Match: RL15_SYNJB (50S ribosomal protein L15 OS=Synechococcus sp. GN=rplO PE=3 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 1.168e-25 Identity = 70/152 (46.05%), Postives = 93/152 (61.18%), Query Frame = -3 Query: 345 NLGPQPGSXXXXXXXXXGIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAGCTLTVL 800 ++ PQ GS G++AGQG SCG GMRGQK+R G R GFEGGQ PLYRR+PKL+ + +Y VNL+ + A G EVSLE+L ++G++ + PLKILGDGE+S L +A A + SAK K+EAAG + +L Sbjct: 5 DIRPQAGSTRRRRRLGRGVSAGQGASCGKGMRGQKARKGGSTRPGFEGGQTPLYRRLPKLKHFP--RYRRRLEYTLVNLRAL--ADLPAGSEVSLESLMERGIVTTNDG----PLKILGDGEVSVPLTIRAAAITASAKVKVEAAGGRVEIL 148
BLAST of CV887120 vs. ExPASy Swiss-Prot
Match: RL15_SYNR3 (50S ribosomal protein L15 OS=Synechococcus sp. (strain RCC307) GN=rplO PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.992e-25 Identity = 71/146 (48.63%), Postives = 88/146 (60.27%), Query Frame = -3 Query: 363 NLGPQPGSXXXXXXXXXGIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAG 800 +L PQ G+ GIAAGQG SCGFGMRGQKSRSG R GFEGGQMPLYRR+PKL+ ++ VN+ E A G V+ ++L + G++ K LK+LGDGEL KL A AF+ SA+EK+EAAG Sbjct: 7 SLKPQKGARRRKMRKGRGIAAGQGASCGFGMRGQKSRSGRPTRPGFEGGQMPLYRRVPKLKHFT---LVNPKRFTVVNVG--ELAELKAGTVVTRDSLTEAGILT----SPKHALKVLGDGELKVKLTVHAAAFTASAREKIEAAG 143
BLAST of CV887120 vs. ExPASy Swiss-Prot
Match: RL15_NOSP7 (50S ribosomal protein L15 OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=rplO PE=3 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 2.601e-25 Identity = 71/153 (46.41%), Postives = 92/153 (60.13%), Query Frame = -3 Query: 345 NNLGPQPGSXXXXXXXXXGIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAGCTLTVL 803 +++ PQ GS GI+AGQG S G GMRGQKSRSG G R GFEGGQ PLYRR+PKL+G Y +N++ + A EV+L +LK G++ K PLKILG+GELS L +A AF+ +A+ K+EAAG + VL Sbjct: 4 HDVKPQKGSKKRKKRVARGISAGQGASAGLGMRGQKSRSGSGTRPGFEGGQQPLYRRLPKLKGFP---IVNQKIYTTINVEKL--ASLPANTEVTLASLKAAGILTAV----KGPLKILGNGELSTPLKVQAAAFTGTARSKIEAAGGSCEVL 147
BLAST of CV887120 vs. ExPASy Swiss-Prot
Match: RL15_SYNS9 (50S ribosomal protein L15 OS=Synechococcus sp. (strain CC9902) GN=rplO PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 3.397e-25 Identity = 74/141 (52.48%), Postives = 92/141 (65.25%), Query Frame = -3 Query: 345 IAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGL--PKYVPV----NLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELS-KKLNFKARAFSTSAKEKLEAAGCTLTVL 746 IAAGQG SCGFGMRGQKSRSG R GFEGGQMPLYRR+PKL+ H L PK+ V LKD++ +G V+L++L K G++ K PLK+LG+GEL+ K L +A AF+TSA+ K+EAAG T L Sbjct: 25 IAAGQGASCGFGMRGQKSRSGRPTRPGFEGGQMPLYRRVPKLK------HFPLVNPKHFTVLNVSALKDLK-----DGATVNLDSLVKDGIVT----SPKHPLKMLGNGELTVKNLTVQASAFTTSARTKIEAAGGTCETL 150
BLAST of CV887120 vs. ExPASy Swiss-Prot
Match: RL15_SYNSC (50S ribosomal protein L15 OS=Synechococcus sp. (strain CC9605) GN=rplO PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 4.437e-25 Identity = 70/136 (51.47%), Postives = 89/136 (65.44%), Query Frame = -3 Query: 345 IAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFL-EGDEVSLETLKKKGLINPSGRERKLPLKILGDGEL-SKKLNFKARAFSTSAKEKLEAAGCTLTVL 746 IAAGQG SCGFGMRGQKSRSG R GFEGGQMPLYRR+PKL+ H L + ++ A L +G V+L++L K G++ K PLK+LG+GEL +KKL +A AF++SA K+EAAG T +L Sbjct: 25 IAAGQGASCGFGMRGQKSRSGRPTRPGFEGGQMPLYRRVPKLK------HFPLVNPKHFTVLNVSALNDLKDGSTVNLDSLVKDGIVT----SPKHPLKMLGNGELTAKKLTVQAAAFTSSALTKIEAAGGTCDIL 150
BLAST of CV887120 vs. ExPASy Swiss-Prot
Match: RL15_PROM5 (50S ribosomal protein L15 OS=Prochlorococcus marinus (strain MIT 9515) GN=rplO PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 9.884e-25 Identity = 74/154 (48.05%), Postives = 92/154 (59.74%), Query Frame = -3 Query: 345 NNLGPQPGSXXXXXXXXXGIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETL-KKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAGCTLTVL 803 N L GS GIAAGQG SCGFGMRGQKSRSG R GFEGGQMPLYRR+PKL+ Y VNL + + F + + V++++L KKK L P K PLKILG+G + KL +A AF+ A+EK+E+AG + VL Sbjct: 6 NTLKSNLGSRKKKLRKGRGIAAGQGASCGFGMRGQKSRSGRPTRPGFEGGQMPLYRRVPKLKHFE---IINQKNYSIVNLSKL--SEFKDNEIVNIDSLVKKKLLFKP-----KFPLKILGNGVVKVKLKVQAHAFTKVAQEKIESAGGSCEVL 149
BLAST of CV887120 vs. ExPASy Swiss-Prot
Match: RL15_SYNPX (50S ribosomal protein L15 OS=Synechococcus sp. (strain WH8102) GN=rplO PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.291e-24 Identity = 68/130 (52.31%), Postives = 86/130 (66.15%), Query Frame = -3 Query: 363 IAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFL-EGDEVSLETLKKKGLINPSGRERKLPLKILGDGEL-SKKLNFKARAFSTSAKEKLEAAG 746 IAAGQG SCGFGMRGQKSRSG R GFEGGQMPLYRR+PKL+ H L + ++ A L +G V+L++L K G++ K PLKILG+G+L +KKL +A AF+ SA+ K+EAAG Sbjct: 26 IAAGQGASCGFGMRGQKSRSGRPTRPGFEGGQMPLYRRVPKLK------HFPLVNPKHFTVLNVSALNSLKDGSTVNLDSLVKDGVVT----SPKHPLKILGNGDLTAKKLTVQAAAFTASARTKIEAAG 145
BLAST of CV887120 vs. ExPASy Swiss-Prot
Match: RL15_PROMT (50S ribosomal protein L15 OS=Prochlorococcus marinus (strain NATL2A) GN=rplO PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 4.905e-24 Identity = 68/146 (46.58%), Postives = 87/146 (59.59%), Query Frame = -3 Query: 363 NLGPQPGSXXXXXXXXXGIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAG 800 +L GS GIAAGQG SCGFGMRGQKSRSG R GFEGGQMPLYRR+PKL+ + +N+ + A +G V+L+ L K+G++ + K PLKILG+G+L KL +A AF+ SAK K+E G Sbjct: 7 SLQSNKGSRRKKMRKGRGIAAGQGASCGFGMRGQKSRSGRPTRPGFEGGQMPLYRRVPKLKHFP---IVNQKNFTVLNVSRLNA--LKDGTIVNLDLLVKEGILT----KPKNPLKILGNGKLEVKLTVQAAAFTASAKNKIEEVG 143
BLAST of CV887120 vs. ExPASy Swiss-Prot
Match: RL15_PROM1 (50S ribosomal protein L15 OS=Prochlorococcus marinus (strain NATL1A) GN=rplO PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 4.905e-24 Identity = 68/146 (46.58%), Postives = 87/146 (59.59%), Query Frame = -3 Query: 363 NLGPQPGSXXXXXXXXXGIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAG 800 +L GS GIAAGQG SCGFGMRGQKSRSG R GFEGGQMPLYRR+PKL+ + +N+ + A +G V+L+ L K+G++ + K PLKILG+G L KL +A AF+ SAK+K+E G Sbjct: 7 SLQSNKGSRRKKMRKGRGIAAGQGASCGFGMRGQKSRSGRPTRPGFEGGQMPLYRRVPKLKHFP---IVNQKNFTVLNVSRLNA--LKDGTIVNLDLLVKEGILT----KPKNPLKILGNGNLEVKLTVQAAAFTASAKKKIEEVG 143
BLAST of CV887120 vs. ExPASy Swiss-Prot
Match: RL15_CYAA5 (50S ribosomal protein L15 OS=Cyanothece sp. (strain ATCC 51142) GN=rplO PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 4.905e-24 Identity = 68/149 (45.64%), Postives = 90/149 (60.40%), Query Frame = -3 Query: 363 NNLGPQPGSXXXXXXXXXGIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLR--GIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAG 803 + + PQ GS GI+AGQG S GFGMRGQKSRSG G + GFEGGQMPLYRR+PKL+ + H Y +N+ + + EV+LE+L + GLI + PLK+LG+GEL+ L +A F+ SAK K+E+AG Sbjct: 4 HEVNPQKGSTKRRRRIGRGISAGQGASGGFGMRGQKSRSGTGTKAGFEGGQMPLYRRVPKLKHFPLVNPSH-----YTIINVGKLNSLS--PNTEVTLESLMEVGLITSNDG----PLKVLGNGELTVPLTVRAPKFTASAKAKIESAG 141 The following BLAST results are available for this feature:
BLAST of CV887120 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CV887120 ID=CV887120; Name=CV887120; organism=Citrus sinensis; type=EST; length=805bpback to top |