CV887119
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV887119 vs. ExPASy Swiss-Prot
Match: RL15_PROMS (50S ribosomal protein L15 OS=Prochlorococcus marinus (strain AS9601) GN=rplO PE=3 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 2.761e-26 Identity = 70/148 (47.30%), Postives = 91/148 (61.49%), Query Frame = 3 Query: 264 LNNLGPQPGSXXXXXXXXXXIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAG 707 LN L GS IAAGQG SCGFGMRGQKSRSG R GFEGGQMPLYRR+PKL+ + +NL+ + F + D V++++L KKGLI + K PLKILG+G+++ KL +A +F+ AK+K+E AG Sbjct: 5 LNTLKSNSGSRKKKLRKGRGIAAGQGASCGFGMRGQKSRSGRPTRPGFEGGQMPLYRRVPKLKHFE---IINQKNFSIINLEKLN--DFKDNDTVNIDSLVKKGLI----FKPKFPLKILGNGKINVKLKVQAHSFTKVAKQKIEDAG 143
BLAST of CV887119 vs. ExPASy Swiss-Prot
Match: RL15_PROMA (50S ribosomal protein L15 OS=Prochlorococcus marinus GN=rplO PE=3 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 2.761e-26 Identity = 71/149 (47.65%), Postives = 89/149 (59.73%), Query Frame = 3 Query: 264 LNNLGPQPGSXXXXXXXXXXIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFL-EGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAG 707 L++L P G+ IAAGQG SCGFGMRGQKSRSG R GFEGGQMPLYRR+PKL+ H L L ++ + L EG V+L++L K G++ K PLK+LG+G L KL +A AF+ SAK K+E AG Sbjct: 6 LDSLKPNKGARKRKTRKGRGIAAGQGASCGFGMRGQKSRSGRPTRPGFEGGQMPLYRRVPKLK------HFPLVNSKSFTLINVASLNSLKEGSTVNLDSLVKTGIVT----SPKYPLKVLGNGNLKVKLVVQAAAFTASAKTKIEGAG 144
BLAST of CV887119 vs. ExPASy Swiss-Prot
Match: RL15_SYNS9 (50S ribosomal protein L15 OS=Synechococcus sp. (strain CC9902) GN=rplO PE=3 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 3.606e-26 Identity = 78/162 (48.15%), Postives = 99/162 (61.11%), Query Frame = 3 Query: 261 RLNNLGPQPGSXXXXXXXXXXIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGL--PKYVPV----NLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELS-KKLNFKARAFSTSAKEKLEAAGCTLTVL 725 RL++L G+ IAAGQG SCGFGMRGQKSRSG R GFEGGQMPLYRR+PKL+ H L PK+ V LKD++ +G V+L++L K G++ K PLK+LG+GEL+ K L +A AF+TSA+ K+EAAG T L Sbjct: 4 RLDSLKANKGARRRKLRKGRGIAAGQGASCGFGMRGQKSRSGRPTRPGFEGGQMPLYRRVPKLK------HFPLVNPKHFTVLNVSALKDLK-----DGATVNLDSLVKDGIVT----SPKHPLKMLGNGELTVKNLTVQASAFTTSARTKIEAAGGTCETL 150
BLAST of CV887119 vs. ExPASy Swiss-Prot
Match: RL15_SYNSC (50S ribosomal protein L15 OS=Synechococcus sp. (strain CC9605) GN=rplO PE=3 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 4.709e-26 Identity = 74/157 (47.13%), Postives = 96/157 (61.15%), Query Frame = 3 Query: 261 RLNNLGPQPGSXXXXXXXXXXIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFL-EGDEVSLETLKKKGLINPSGRERKLPLKILGDGEL-SKKLNFKARAFSTSAKEKLEAAGCTLTVL 725 RL++L G+ IAAGQG SCGFGMRGQKSRSG R GFEGGQMPLYRR+PKL+ H L + ++ A L +G V+L++L K G++ K PLK+LG+GEL +KKL +A AF++SA K+EAAG T +L Sbjct: 4 RLDSLKSNKGARRRKLRKGRGIAAGQGASCGFGMRGQKSRSGRPTRPGFEGGQMPLYRRVPKLK------HFPLVNPKHFTVLNVSALNDLKDGSTVNLDSLVKDGIVT----SPKHPLKMLGNGELTAKKLTVQAAAFTSSALTKIEAAGGTCDIL 150
BLAST of CV887119 vs. ExPASy Swiss-Prot
Match: RL15_SYNR3 (50S ribosomal protein L15 OS=Synechococcus sp. (strain RCC307) GN=rplO PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 6.150e-26 Identity = 71/148 (47.97%), Postives = 88/148 (59.46%), Query Frame = 3 Query: 264 LNNLGPQPGSXXXXXXXXXXIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAG 707 L +L PQ G+ IAAGQG SCGFGMRGQKSRSG R GFEGGQMPLYRR+PKL+ ++ VN+ E A G V+ ++L + G++ K LK+LGDGEL KL A AF+ SA+EK+EAAG Sbjct: 5 LQSLKPQKGARRRKMRKGRGIAAGQGASCGFGMRGQKSRSGRPTRPGFEGGQMPLYRRVPKLKHFT---LVNPKRFTVVNVG--ELAELKAGTVVTRDSLTEAGILT----SPKHALKVLGDGELKVKLTVHAAAFTASAREKIEAAG 143
BLAST of CV887119 vs. ExPASy Swiss-Prot
Match: RL15_SYNPX (50S ribosomal protein L15 OS=Synechococcus sp. (strain WH8102) GN=rplO PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.789e-25 Identity = 72/151 (47.68%), Postives = 92/151 (60.93%), Query Frame = 3 Query: 261 RLNNLGPQPGSXXXXXXXXXXIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFL-EGDEVSLETLKKKGLINPSGRERKLPLKILGDGEL-SKKLNFKARAFSTSAKEKLEAAG 707 RL +L G+ IAAGQG SCGFGMRGQKSRSG R GFEGGQMPLYRR+PKL+ H L + ++ A L +G V+L++L K G++ K PLKILG+G+L +KKL +A AF+ SA+ K+EAAG Sbjct: 5 RLESLKANKGARRRKLRKGRGIAAGQGASCGFGMRGQKSRSGRPTRPGFEGGQMPLYRRVPKLK------HFPLVNPKHFTVLNVSALNSLKDGSTVNLDSLVKDGVVT----SPKHPLKILGNGDLTAKKLTVQAAAFTASARTKIEAAG 145
BLAST of CV887119 vs. ExPASy Swiss-Prot
Match: RL15_PROM5 (50S ribosomal protein L15 OS=Prochlorococcus marinus (strain MIT 9515) GN=rplO PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 3.052e-25 Identity = 74/155 (47.74%), Postives = 92/155 (59.35%), Query Frame = 3 Query: 264 LNNLGPQPGSXXXXXXXXXXIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETL-KKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAGCTLTVL 725 LN L GS IAAGQG SCGFGMRGQKSRSG R GFEGGQMPLYRR+PKL+ Y VNL + + F + + V++++L KKK L P K PLKILG+G + KL +A AF+ A+EK+E+AG + VL Sbjct: 5 LNTLKSNLGSRKKKLRKGRGIAAGQGASCGFGMRGQKSRSGRPTRPGFEGGQMPLYRRVPKLKHFE---IINQKNYSIVNLSKL--SEFKDNEIVNIDSLVKKKLLFKP-----KFPLKILGNGVVKVKLKVQAHAFTKVAQEKIESAGGSCEVL 149
BLAST of CV887119 vs. ExPASy Swiss-Prot
Match: RL15_CYAA5 (50S ribosomal protein L15 OS=Cyanothece sp. (strain ATCC 51142) GN=rplO PE=3 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 6.800e-25 Identity = 68/151 (45.03%), Postives = 91/151 (60.26%), Query Frame = 3 Query: 261 RLNNLGPQPGSXXXXXXXXXXIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLR--GIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAG 707 R++ + PQ GS I+AGQG S GFGMRGQKSRSG G + GFEGGQMPLYRR+PKL+ + H Y +N+ + + EV+LE+L + GLI + PLK+LG+GEL+ L +A F+ SAK K+E+AG Sbjct: 2 RIHEVNPQKGSTKRRRRIGRGISAGQGASGGFGMRGQKSRSGTGTKAGFEGGQMPLYRRVPKLKHFPLVNPSH-----YTIINVGKLNSLS--PNTEVTLESLMEVGLITSNDG----PLKVLGNGELTVPLTVRAPKFTASAKAKIESAG 141
BLAST of CV887119 vs. ExPASy Swiss-Prot
Match: RL15_PROMT (50S ribosomal protein L15 OS=Prochlorococcus marinus (strain NATL2A) GN=rplO PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 8.881e-25 Identity = 68/149 (45.64%), Postives = 88/149 (59.06%), Query Frame = 3 Query: 261 RLNNLGPQPGSXXXXXXXXXXIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAG 707 +L +L GS IAAGQG SCGFGMRGQKSRSG R GFEGGQMPLYRR+PKL+ + +N+ + A +G V+L+ L K+G++ + K PLKILG+G+L KL +A AF+ SAK K+E G Sbjct: 4 KLESLQSNKGSRRKKMRKGRGIAAGQGASCGFGMRGQKSRSGRPTRPGFEGGQMPLYRRVPKLKHFP---IVNQKNFTVLNVSRLNA--LKDGTIVNLDLLVKEGILT----KPKNPLKILGNGKLEVKLTVQAAAFTASAKNKIEEVG 143
BLAST of CV887119 vs. ExPASy Swiss-Prot
Match: RL15_PROM1 (50S ribosomal protein L15 OS=Prochlorococcus marinus (strain NATL1A) GN=rplO PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 8.881e-25 Identity = 68/149 (45.64%), Postives = 88/149 (59.06%), Query Frame = 3 Query: 261 RLNNLGPQPGSXXXXXXXXXXIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAG 707 +L +L GS IAAGQG SCGFGMRGQKSRSG R GFEGGQMPLYRR+PKL+ + +N+ + A +G V+L+ L K+G++ + K PLKILG+G L KL +A AF+ SAK+K+E G Sbjct: 4 KLESLQSNKGSRRKKMRKGRGIAAGQGASCGFGMRGQKSRSGRPTRPGFEGGQMPLYRRVPKLKHFP---IVNQKNFTVLNVSRLNA--LKDGTIVNLDLLVKEGILT----KPKNPLKILGNGNLEVKLTVQAAAFTASAKKKIEEVG 143 The following BLAST results are available for this feature:
BLAST of CV887119 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CV887119 ID=CV887119; Name=CV887119; organism=Citrus sinensis; type=EST; length=753bpback to top |