CV887109

Overview
NameCV887109
Unique NameCV887109
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length691
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV887109 vs. ExPASy Swiss-Prot
Match: E1312_ARATH (Glucan endo-1,3-beta-glucosidase 12 OS=Arabidopsis thaliana GN=At4g29360 PE=1 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 8.683e-29
Identity = 72/184 (39.13%), Postives = 107/184 (58.15%), Query Frame = 3
Query:  108 SAQIGVCYGMHGDNLPSKSDVIALYNQNNIRRMRLYDPNKEALEALRGSNIEVMLGVPNDFDLLRRIASNQAEANTWXXXXXXXXXXXXXXXYIAVGNEPKPGDDFAQYLV-PAMRNIQNAINGANLGSQIKVSTAIAFGALDKSSPPSAGSFNQDYRPILDPLITFLNEXNSPLLVNLYPYFA 656
            +++IG+CYG + DNLPS + V  L    NI+ +R+YD N + L+A   + IE+M+GVPN  DLL   A  Q+  +TW                I+VG E     D A  LV PAMRNI  A+  + L  +IK+S++ +   L +S PPS+ SF++ +   L P++ FL E  SP +++LYPY+A
Sbjct:   24 ASKIGICYGRNADNLPSPNRVSELIQHLNIKFVRIYDANIDVLKAFANTGIELMIGVPNA-DLLA-FAQFQSNVDTWLSNNILPYYPSTKITSISVGLEVTEAPDNATGLVLPAMRNIHTALKKSGLDKKIKISSSHSLAILSRSFPPSSASFSKKHSAFLKPMLEFLVENESPFMIDLYPYYA 205          
BLAST of CV887109 vs. ExPASy Swiss-Prot
Match: E13A_HORVU (Glucan endo-1,3-beta-glucosidase GI OS=Hordeum vulgare PE=1 SV=2)

HSP 1 Score: 126.331 bits (316), Expect = 1.481e-28
Identity = 79/192 (41.15%), Postives = 108/192 (56.25%), Query Frame = 3
Query:  117 IGVCYGMHGDNLPSKSDVIALYNQNNIRRMRLYDPNKEALEALRGSNIEVMLGVPNDFDLLRRIASNQAEANTWXXXXXXXXXXXXXXXYIAVGNEPKPGDDFAQYLVPAMRNIQNAINGANLGSQIKVSTAIAFGALDKSSPPSAGSFNQDYRPILDPLITFLNEXNSPLLVNLYPYFAIVGD-RQISLDY 689
            IGVCYG+  +NLP  ++V+ LY  N +  MR+Y  + +AL ALRGS I ++L V  + D+L  +A+N + A  W               YIA GNE   GD   Q +VPAMRN+  A+    LG+ IKVST+I F A+  + PPS G F Q Y   +  +   L    +PLL N+YPYFA   + R I L+Y
Sbjct:    2 IGVCYGVVANNLPPANEVVQLYRSNGLTGMRIYFADAKALSALRGSGIGLILDVGGN-DVLASLAANASNAANWVRDNVRPYYPAVNIKYIAAGNEVWGGD--TQNIVPAMRNLGAALKAPGLGT-IKVSTSIRFDAVTNTFPPSNGVFAQAY---MTDVARLLASTGAPLLTNVYPYFAYKDNPRDIQLNY 186          
BLAST of CV887109 vs. ExPASy Swiss-Prot
Match: E1311_ARATH (Glucan endo-1,3-beta-glucosidase 11 OS=Arabidopsis thaliana GN=At1g32860 PE=1 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 2.526e-28
Identity = 74/214 (34.58%), Postives = 117/214 (54.67%), Query Frame = 3
Query:   57 SVIILLLGMLIATLDTTSAQIGVCYGMHGDNLPSKSDVIALYNQNNIRRMRLYDPNKEALEALRGSNIEVMLGVPNDFDLLRRIASNQAEANTWXXXXXXXXXXXXXXXYIAVGNEPKPGDD--FAQYLVPAMRNIQNAINGANLGSQIKVSTAIAFGALDKSSPPSAGSFNQDYRPILDPLITFLNEXNSPLLVNLYPYFAIVGD-RQISLDY 689
            S ++ L+ + +  L TT+  IGV YG  GDNLPS +DVI L       +++LYD N + L+A   + IE ++G+ N++  L ++  + ++A TW                I +GNE    +D      L+PAM+ + +A+  A L  QI V+TA +   L  S PPSAG F  D    L P++ F  + +SP L+N YP+FA  G+ +++ LD+
Sbjct:    9 SSLLFLISLTLIILPTTTTSIGVNYGQIGDNLPSPTDVIPLIKSIGATKVKLYDANPQILKAFSNTGIEFIIGLGNEY--LSKM-KDPSKALTWIKQNVTPFLPATNITCITIGNEILALNDSSLTTNLLPAMQGVHSALITAGLSDQISVTTAHSLSILKSSFPPSAGEFQPDLLDSLTPILEFHRKTDSPFLINAYPFFAYKGNPKEVPLDF 219          
BLAST of CV887109 vs. ExPASy Swiss-Prot
Match: E133_ARATH (Glucan endo-1,3-beta-glucosidase 3 OS=Arabidopsis thaliana GN=At2g01630 PE=1 SV=2)

HSP 1 Score: 121.709 bits (304), Expect = 3.648e-27
Identity = 79/215 (36.74%), Postives = 116/215 (53.95%), Query Frame = 3
Query:   51 MASVIILLLGMLIATLDTTSAQIGVCYGMHGDNLPSKSDVIALYNQNNIRRMRLYDPNKEALEALRGSNIEVMLGVPNDFDLLRRIASNQAEANTWXXXXXXXXXXXXXXXYIAVGNEPKPG-DDFAQYLVPAMRNIQNAINGANLGSQIKVSTAIAFGALDKSSPPSAGSFNQDYRPILDPLITFLNEXNSPLLVNLYPYFAIV-GDRQISLDY 689
            MA++++L L +  ++  +  + IGV  G    N+PS + V+AL    NI R+RLYD ++  L A   + ++V++ VPND   L  I+ + A A  W                IAVG+E      + A  LV A++ IQ A+  ANL  QIKVST  +   +  S PPS   FN+ + P++ PL+ FL    SPLL+N+YPYF  V  +  I LDY
Sbjct:    1 MAALLLLFLFLFASSALSQDSLIGVNIGTEVTNMPSPTQVVALLKSQNINRVRLYDADRSMLLAFAHTGVQVIISVPND--QLLGISQSNATAANWVTRNVAAYYPATNITTIAVGSEVLTSLTNAASVLVSALKYIQAALVTANLDRQIKVSTPHSSTIILDSFPPSQAFFNKTWDPVIVPLLKFLQSTGSPLLLNVYPYFDYVQSNGVIPLDY 213          
BLAST of CV887109 vs. ExPASy Swiss-Prot
Match: E13D_HORVU (Glucan endo-1,3-beta-glucosidase GIV OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.061e-26
Identity = 77/193 (39.90%), Postives = 105/193 (54.40%), Query Frame = 3
Query:  117 IGVCYGMHGDNLPSKSDVIALYNQNNIRRMRLYDPNKEALEALRGSNIEVMLGVPNDFDLLRRIASNQAEANTW-XXXXXXXXXXXXXXXYIAVGNEPKPGDDFAQYLVPAMRNIQNAINGANLGSQIKVSTAIAFGALDKSSPPSAGSFNQDYRPILDPLITFLNEXNSPLLVNLYPYFAIVGD-RQISLDY 689
            IGVCYG+  +NLP + +V+ LY    I  MR+Y    +A+ AL GS I +MLG  N+   +  +A + + A +W                YIAVGNE   G   AQ ++ AMRN+  A+  A LG  IKVSTA+ F  +  S PPS+  F Q   P +  +   L   N+PLL N+YPYFA  G+ R I L+Y
Sbjct:    1 IGVCYGIIANNLPPRREVVQLYRSKGITNMRIYSVQPQAIRALHGSGIRLMLGTTNND--VAVLAGSLSAATSWVHANVKPYHSAGVTIRYIAVGNEITGG--AAQSILAAMRNLNKALAAARLGG-IKVSTAVRFDVITNSFPPSSAVFAQ---PYMVDIARHLASTNAPLLANVYPYFAYSGNPRDIKLNY 185          
BLAST of CV887109 vs. ExPASy Swiss-Prot
Match: E13C_HORVU (Glucan endo-1,3-beta-glucosidase GIII OS=Hordeum vulgare PE=1 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 2.614e-25
Identity = 78/193 (40.41%), Postives = 104/193 (53.89%), Query Frame = 3
Query:  117 IGVCYGMHGDNLPSKSDVIALYNQNNIRRMRLYDPNKEALEALRGSNIEVMLGVPNDFDLLRRIASNQAEANTWXXXXXXXXXXXXXXXYIAVGNEPKPGDDFAQ-YLVPAMRNIQNAINGANLGSQIKVSTAIAFGALDKSSPPSAGSFNQDYRPILDPLITFLNEXNSPLLVNLYPYFAIVGD-RQISLDY 689
            IGVC G+ G+NLP+ SDV+ LY    I  MR+Y+P  + L AL G+ I V++ V      L  +AS+ + A  W               YIAV NE    D   Q  ++PAMRN+Q A+  A  GS IKVST++ F   + +SPPS G    D    L P++ FL     PLL N+YPYFA  G+ R I L +
Sbjct:   26 IGVCNGVLGNNLPAPSDVVTLYRSKRIDAMRIYEPESKVLTALSGTGIAVLMDVG---PALPSLASSPSAAAAW-VKANVSSFPGVSFRYIAVRNEVM--DSAGQSTILPAMRNVQRALAAA--GSPIKVSTSVRFDVFNNTSPPSNGVL-ADKSGFLRPILNFLARPARPLLANVYPYFAYKGNPRDIQLTF 209          
BLAST of CV887109 vs. ExPASy Swiss-Prot
Match: E137_ARATH (Glucan endo-1,3-beta-glucosidase 7 OS=Arabidopsis thaliana GN=At4g34480 PE=1 SV=2)

HSP 1 Score: 114.005 bits (284), Expect = 7.607e-25
Identity = 68/208 (32.69%), Postives = 108/208 (51.92%), Query Frame = 3
Query:   57 SVIILLLGMLIATLDTTSAQ--IGVCYGMHGDNLPSKSDVIALYNQNNIRRMRLYDPNKEALEALRGSNIEVMLGVPNDFDLLRRIASNQAEANTWXXXXXXXXXXXXXXXYIAVGNEPKPGDD--FAQYLVPAMRNIQNAINGANLGSQIKVSTAIAFGALDKSSPPSAGSFNQDYRPILDPLITFLNEXNSPLLVNLYPYFAIVGD 668
            S+ I  L + ++   ++ A+  IGV YG   DNLP  S+ + L    +I+++RLY  +   ++AL G+ + +++G  N    +  +AS+   A  W                I VGNE    +D      L+PAM+N+Q A+   +LG +IKVST  +   L  S PPS+GSF   Y+  L  ++ FL++  SP  +N YP+FA   D
Sbjct:    4 SISIYFLLIFLSHFPSSHAEPFIGVNYGQVADNLPPPSETVKLLQSTSIQKVRLYGADPAIIKALAGTGVGIVIGAANGD--VPSLASDPNAATQWINSNVLPFYPASKIMLITVGNEILMSNDPNLVNQLLPAMQNVQKALEAVSLGGKIKVSTVNSMTVLGSSDPPSSGSFAAGYQTGLKGILQFLSDTGSPFAINPYPFFAYQSD 209          
BLAST of CV887109 vs. ExPASy Swiss-Prot
Match: E1314_ARATH (Glucan endo-1,3-beta-glucosidase 14 OS=Arabidopsis thaliana GN=At2g27500/F10A12.18 PE=1 SV=2)

HSP 1 Score: 110.923 bits (276), Expect = 6.439e-24
Identity = 65/211 (30.81%), Postives = 110/211 (52.13%), Query Frame = 3
Query:   66 ILLLGMLIATLDTTSAQIGVCYGMHGDNLPSKSDVIALYNQNNIRRMRLYDPNKEALEALRGSNIEVMLGVPNDFDLLRRIASNQAEANTWXXXXXXXXXXXXXXXYIAVGNEPKPGDDFA--QYLVPAMRNIQNAINGANLGSQIKVSTAIAFGALDKSSPPSAGSFNQDYRPILDPLITFLNEXNSPLLVNLYPYFAIV-GDRQISLDY 689
            +LLL  L  +       +G+ YG   +NLPS + V  L    NI R++LYD +   L +   S ++ M+G+ N++  L+ ++++  +A  W                I VGNE    +D    Q L+PAM+++  A+    L  Q+ V++A +   L  S PPS+GSF +++   L PL+ F ++  SP L+N YP+FA     +++ L+Y
Sbjct:   12 VLLLLFLTLSERIKGQGVGINYGQIANNLPSPARVAVLLRSLNITRVKLYDADPNVLFSFSNSQVDFMIGLGNEY--LQNMSTDPTKAQDWLQQRLEPHISKTRITSIVVGNEIFKTNDHVLIQSLLPAMKSVYAALTNLGLEKQVTVTSAHSLDILSTSYPPSSGSFKEEFIQYLQPLLDFHSQIESPFLINAYPFFAYKDSPKEVPLEY 220          
BLAST of CV887109 vs. ExPASy Swiss-Prot
Match: E136_ARATH (Glucan endo-1,3-beta-glucosidase 6 OS=Arabidopsis thaliana GN=At5g58090 PE=1 SV=2)

HSP 1 Score: 106.301 bits (264), Expect = 1.586e-22
Identity = 68/213 (31.92%), Postives = 108/213 (50.70%), Query Frame = 3
Query:   69 LLLGMLIATLDTTSAQIGVCYGMHGDNLPSKSDVIALYNQNNIRRMRLYDPNKEALEALRGSNIEVMLGVPNDFDLLRRIASNQAEANTW--XXXXXXXXXXXXXXXYIAVGNEPKPGDDFAQYL---VPAMRNIQNAINGANLGSQIKVSTAIAFGALDKSSP-PSAGSFNQDYRPILDPLITFLNEXNSPLLVNLYPYFAIVGDRQISLDY 689
            +LL + +A L   ++ IG  +G    +      V+ +  +N I++++L+D   + L AL  S IEVM+G+PN  ++L  +AS+   A  W                 Y+AVGNEP        YL    PA+RNIQ AI  A L +Q+KV+  +     D S+  PS G F  + R ++  ++ FL+E   P  VN+YPY ++  +    +DY
Sbjct:    6 VLLLLAVALLCQRASSIGANWGTQASHPLPPDIVVRMLRENGIQKVKLFDAEYDTLRALGKSGIEVMVGIPN--EMLATLASSLKAAEKWVAKNVSTHISTDNVNIRYVAVGNEPFLSTYNGSYLSTTFPALRNIQIAIIKAGLQNQVKVTCPLNADVYDSSTTFPSGGDFRANIRDLMITIVKFLSENGGPFTVNIYPYISLYTNPDFPVDY 216          
BLAST of CV887109 vs. ExPASy Swiss-Prot
Match: E138_ARATH (Glucan endo-1,3-beta-glucosidase 8 OS=Arabidopsis thaliana GN=At1g64760 PE=1 SV=2)

HSP 1 Score: 103.99 bits (258), Expect = 7.872e-22
Identity = 68/224 (30.36%), Postives = 116/224 (51.79%), Query Frame = 3
Query:   51 MASVIILLLGMLIAT--LDTTSAQIGVCYG-MHGDNLPSKSDVIALYNQNNIRRMRLYDPNKEALEALRGSNIEVMLGVPNDFDLLRRIASNQAEANTW--XXXXXXXXXXXXXXXYIAVGNEP---KPGDDFAQYLVPAMRNIQNAINGANLGSQIKVSTAIAFGALDK--SSP-PSAGSFNQDYRPILDPLITFLNEXNSPLLVNLYPYFAIVGDRQISLDY 689
            M++++ L++G +I    L      +GV +G M    LP K+ V+ +   NNI +++L+D ++  + AL GS +EVM+ +PND     ++ ++   A  W                 ++AVGNEP        F     PA+ NIQNA+N A LG+ +K +  +     D   S+P PSAG F  D    +  ++ FL + N+P+ +N+YP+ ++ G+    L+Y
Sbjct:    1 MSNLLALVVGFVIVIGHLGILVNGLGVNWGTMATHKLPPKT-VVQMLKDNNINKVKLFDADETTMGALAGSGLEVMVAIPND---QLKVMTSYDRAKDWVRKNVTRYNFDGGVNITFVAVGNEPFLKSYNGSFINLTFPALANIQNALNEAGLGNSVKATVPLNADVYDSPASNPVPSAGRFRPDIIGQMTQIVDFLGKNNAPITINIYPFLSLYGNDDFPLNY 220          
The following BLAST results are available for this feature:
BLAST of CV887109 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 50
Match NameE-valueIdentityDescription
E1312_ARATH8.683e-2939.13Glucan endo-1,3-beta-glucosidase 12 OS=Arabidopsis... [more]
E13A_HORVU1.481e-2841.15Glucan endo-1,3-beta-glucosidase GI OS=Hordeum vul... [more]
E1311_ARATH2.526e-2834.58Glucan endo-1,3-beta-glucosidase 11 OS=Arabidopsis... [more]
E133_ARATH3.648e-2736.74Glucan endo-1,3-beta-glucosidase 3 OS=Arabidopsis ... [more]
E13D_HORVU1.061e-2639.90Glucan endo-1,3-beta-glucosidase GIV OS=Hordeum vu... [more]
E13C_HORVU2.614e-2540.41Glucan endo-1,3-beta-glucosidase GIII OS=Hordeum v... [more]
E137_ARATH7.607e-2532.69Glucan endo-1,3-beta-glucosidase 7 OS=Arabidopsis ... [more]
E1314_ARATH6.439e-2430.81Glucan endo-1,3-beta-glucosidase 14 OS=Arabidopsis... [more]
E136_ARATH1.586e-2231.92Glucan endo-1,3-beta-glucosidase 6 OS=Arabidopsis ... [more]
E138_ARATH7.872e-2230.36Glucan endo-1,3-beta-glucosidase 8 OS=Arabidopsis ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_029B10_T3 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_029_T3_B10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV887109 ID=CV887109; Name=CV887109; organism=Citrus sinensis; type=EST; length=691bp
ATTTTTCTCCACGCATGGCTAAATTCTTTAACTCTCCCAATGCCCCTTCA
ATGGCTTCCGTGATCATCTTACTTCTGGGGATGCTAATCGCTACCCTGGA
CACAACAAGTGCTCAAATAGGTGTTTGTTATGGAATGCATGGTGACAACT
TACCATCAAAATCAGATGTAATAGCTCTCTACAACCAAAATAACATCAGA
AGAATGAGACTCTATGATCCAAACAAAGAAGCTCTCGAAGCTCTCCGTGG
CTCCAACATTGAAGTCATGCTGGGCGTTCCCAACGATTTTGACCTCCTCC
GAAGAATCGCTTCCAATCAAGCCGAAGCAAATACCTGGGTCCAAGACAAC
GTCCAAAATTTTGTTAACAATGTCAAGTTCAAATATATTGCCGTAGGAAA
TGAACCAAAACCAGGAGACGACTTTGCGCAGTATCTTGTACCCGCCATGA
GAAACATACAAAACGCCATTAACGGAGCTAACCTTGGAAGCCAAATCAAA
GTTTCCACAGCCATTGCATTCGGAGCTCTTGATAAATCCTCTCCGCCGTC
AGCTGGCTCCTTTAATCAAGATTACAGACCAATTCTCGATCCCCTCATTA
CCTTCCTTAACGAANACAATTCCCCGTTGCTTGTTAACTTGTACCCTTAC
TTTGCCATCGTTGGTGACCGTCAAATATCTCTTGATTATGC
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