CV887103

Overview
NameCV887103
Unique NameCV887103
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length854
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CV887103 vs. ExPASy Swiss-Prot
Match: GLGC_NOSP7 (Glucose-1-phosphate adenylyltransferase OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=glgC PE=3 SV=1)

HSP 1 Score: 274.633 bits (701), Expect = 4.816e-73
Identity = 134/178 (75.28%), Postives = 155/178 (87.08%), Query Frame = 3 
Query:  321 RSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPENPNWFQGTADAVRQYLWLFEEHNVLEFLVLAGDHLYRMDYERFIQAHRETDADITVAALPMDEKRATAFGLMKIDEKGRIIEFS 854
            + VL IILGGGAGTRLYPLTK RAKPAVP+   YRLIDIPVSNC+NS I KIYVLTQFNSASLNRH++R Y  N  G+ NEGFVEVLAAQQ+PENPNWFQGTADAVRQYLWL EE +V E+L+L+GDHLYRMDY +FIQ HR+T ADIT++ +P+DE+RA+ FGLMKID+ GRII+FS
Sbjct:    2 KKVLSIILGGGAGTRLYPLTKLRAKPAVPVAGKYRLIDIPVSNCINSEIFKIYVLTQFNSASLNRHIARTY--NFTGF-NEGFVEVLAAQQTPENPNWFQGTADAVRQYLWLMEEWDVEEYLILSGDHLYRMDYRQFIQRHRDTGADITLSVIPIDERRASDFGLMKIDDSGRIIDFS 176
[Close]
BLAST of CV887103 vs. ExPASy Swiss-Prot
Match: GLGC_ANAVT (Glucose-1-phosphate adenylyltransferase OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=glgC PE=3 SV=1)

HSP 1 Score: 270.781 bits (691), Expect = 6.954e-72
Identity = 131/178 (73.60%), Postives = 154/178 (86.52%), Query Frame = 3 
Query:  321 RSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPENPNWFQGTADAVRQYLWLFEEHNVLEFLVLAGDHLYRMDYERFIQAHRETDADITVAALPMDEKRATAFGLMKIDEKGRIIEFS 854
            + VL IILGGGAGTRLYPLTK RAKPAVP+   YRLIDIPVSNC+NS I KIYVLTQFNSASLNRH++R Y  N  G+ +EGFVEVLAAQQ+PENPNWFQGTADAVRQYLW+ +E +V EFL+L+GDHLYRMDY  FIQ HRET+ADIT++ +P+D++RA+ FGLMKID  GR+I+FS
Sbjct:    2 KKVLAIILGGGAGTRLYPLTKLRAKPAVPVAGKYRLIDIPVSNCINSEIFKIYVLTQFNSASLNRHIARTY--NFSGF-SEGFVEVLAAQQTPENPNWFQGTADAVRQYLWMLQEWDVDEFLILSGDHLYRMDYRLFIQRHRETNADITLSVIPIDDRRASDFGLMKIDNSGRVIDFS 176
[Close]
BLAST of CV887103 vs. ExPASy Swiss-Prot
Match: GLGC_ANASP (Glucose-1-phosphate adenylyltransferase OS=Anabaena sp. (strain PCC 7120) GN=glgC PE=1 SV=1)

HSP 1 Score: 270.781 bits (691), Expect = 6.954e-72
Identity = 131/178 (73.60%), Postives = 154/178 (86.52%), Query Frame = 3 
Query:  321 RSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPENPNWFQGTADAVRQYLWLFEEHNVLEFLVLAGDHLYRMDYERFIQAHRETDADITVAALPMDEKRATAFGLMKIDEKGRIIEFS 854
            + VL IILGGGAGTRLYPLTK RAKPAVP+   YRLIDIPVSNC+NS I KIYVLTQFNSASLNRH++R Y  N  G+ +EGFVEVLAAQQ+PENPNWFQGTADAVRQYLW+ +E +V EFL+L+GDHLYRMDY  FIQ HRET+ADIT++ +P+D++RA+ FGLMKID  GR+I+FS
Sbjct:    2 KKVLAIILGGGAGTRLYPLTKLRAKPAVPVAGKYRLIDIPVSNCINSEIFKIYVLTQFNSASLNRHIARTY--NFSGF-SEGFVEVLAAQQTPENPNWFQGTADAVRQYLWMLQEWDVDEFLILSGDHLYRMDYRLFIQRHRETNADITLSVIPIDDRRASDFGLMKIDNSGRVIDFS 176
[Close]
BLAST of CV887103 vs. ExPASy Swiss-Prot
Match: GLGC_SYNP6 (Glucose-1-phosphate adenylyltransferase OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=glgC PE=3 SV=1)

HSP 1 Score: 268.47 bits (685), Expect = 3.451e-71
Identity = 129/178 (72.47%), Postives = 155/178 (87.08%), Query Frame = 3 
Query:  321 RSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPENPNWFQGTADAVRQYLWLFEEHNVLEFLVLAGDHLYRMDYERFIQAHRETDADITVAALPMDEKRATAFGLMKIDEKGRIIEFS 854
            ++VL IILGGGAG+RLYPLTK+RAKPAVPL   YRLIDIPVSNC+N++I+KIYVLTQFNSASLNRHLS+ Y  N+      GFVEVLAAQ +PENPNWFQGTADAVRQYLWL +E +V E+L+L+GDHLYRMDY +FIQ HR+T+ADIT++ LP+DEKRA+ FGLMK+D  GR++EFS
Sbjct:    2 KNVLAIILGGGAGSRLYPLTKQRAKPAVPLAGKYRLIDIPVSNCINADINKIYVLTQFNSASLNRHLSQTY--NLSSGFGNGFVEVLAAQITPENPNWFQGTADAVRQYLWLIKEWDVDEYLILSGDHLYRMDYSQFIQRHRDTNADITLSVLPIDEKRASDFGLMKLDGSGRVVEFS 177
[Close]
BLAST of CV887103 vs. ExPASy Swiss-Prot
Match: GLGC_SYNE7 (Glucose-1-phosphate adenylyltransferase OS=Synechococcus elongatus (strain PCC 7942) GN=glgC PE=3 SV=1)

HSP 1 Score: 268.47 bits (685), Expect = 3.451e-71
Identity = 129/178 (72.47%), Postives = 155/178 (87.08%), Query Frame = 3 
Query:  321 RSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPENPNWFQGTADAVRQYLWLFEEHNVLEFLVLAGDHLYRMDYERFIQAHRETDADITVAALPMDEKRATAFGLMKIDEKGRIIEFS 854
            ++VL IILGGGAG+RLYPLTK+RAKPAVPL   YRLIDIPVSNC+N++I+KIYVLTQFNSASLNRHLS+ Y  N+      GFVEVLAAQ +PENPNWFQGTADAVRQYLWL +E +V E+L+L+GDHLYRMDY +FIQ HR+T+ADIT++ LP+DEKRA+ FGLMK+D  GR++EFS
Sbjct:    2 KNVLAIILGGGAGSRLYPLTKQRAKPAVPLAGKYRLIDIPVSNCINADINKIYVLTQFNSASLNRHLSQTY--NLSSGFGNGFVEVLAAQITPENPNWFQGTADAVRQYLWLIKEWDVDEYLILSGDHLYRMDYSQFIQRHRDTNADITLSVLPIDEKRASDFGLMKLDGSGRVVEFS 177
[Close]
BLAST of CV887103 vs. ExPASy Swiss-Prot
Match: GLGC_CYAP7 (Glucose-1-phosphate adenylyltransferase OS=Cyanothece sp. (strain PCC 7424) GN=glgC PE=3 SV=1)

HSP 1 Score: 267.314 bits (682), Expect = 7.688e-71
Identity = 131/178 (73.60%), Postives = 153/178 (85.96%), Query Frame = 3 
Query:  321 RSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPENPNWFQGTADAVRQYLWLFEEHNVLEFLVLAGDHLYRMDYERFIQAHRETDADITVAALPMDEKRATAFGLMKIDEKGRIIEFS 854
            + VL IILGGGAGTRLYPLTK RAKPAVPL   YRLIDIPVSNC+NS I+KIYVLTQFNSASLNRHLSR Y  N  G+ +E FVEVLAAQQ+ ENP+WFQGTADAVRQYLWL EE +V E+L+L+GDHLYRMDY  +IQ HRET ADIT++ +P+DEKRA++FGLMKID+  R+++FS
Sbjct:    2 KRVLAIILGGGAGTRLYPLTKLRAKPAVPLAGKYRLIDIPVSNCINSEITKIYVLTQFNSASLNRHLSRTY--NFTGFNDE-FVEVLAAQQTAENPSWFQGTADAVRQYLWLMEEWDVDEYLILSGDHLYRMDYREYIQRHRETKADITLSVVPIDEKRASSFGLMKIDDNARVVDFS 176
[Close]
BLAST of CV887103 vs. ExPASy Swiss-Prot
Match: GLGC_CYAP8 (Glucose-1-phosphate adenylyltransferase OS=Cyanothece sp. (strain PCC 8801) GN=glgC PE=3 SV=1)

HSP 1 Score: 264.618 bits (675), Expect = 4.983e-70
Identity = 128/178 (71.91%), Postives = 153/178 (85.96%), Query Frame = 3 
Query:  321 RSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPENPNWFQGTADAVRQYLWLFEEHNVLEFLVLAGDHLYRMDYERFIQAHRETDADITVAALPMDEKRATAFGLMKIDEKGRIIEFS 854
            + VL IILGGGAGTRLYPLTK RAKPAVPL   YRLIDIP+SNC+NS I KIYVLTQFNSASLNRHL+R Y  N  G+ ++GFVEVLAAQQ+ ENP WFQGTADAVRQYLW F+E ++ E+L+L+GDHLYRMDY  FIQ HRET ADIT++ +P+DE+RA++FGLMKID+ GR+++FS
Sbjct:    2 KKVLAIILGGGAGTRLYPLTKLRAKPAVPLAGKYRLIDIPLSNCINSEILKIYVLTQFNSASLNRHLTRTY--NFTGF-SDGFVEVLAAQQTAENPKWFQGTADAVRQYLWAFQEWDIDEYLILSGDHLYRMDYRDFIQRHRETGADITLSVVPIDEERASSFGLMKIDDHGRVVDFS 176
[Close]
BLAST of CV887103 vs. ExPASy Swiss-Prot
Match: GLGC_CYAA5 (Glucose-1-phosphate adenylyltransferase OS=Cyanothece sp. (strain ATCC 51142) GN=glgC PE=3 SV=1)

HSP 1 Score: 264.618 bits (675), Expect = 4.983e-70
Identity = 129/178 (72.47%), Postives = 154/178 (86.52%), Query Frame = 3 
Query:  321 RSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPENPNWFQGTADAVRQYLWLFEEHNVLEFLVLAGDHLYRMDYERFIQAHRETDADITVAALPMDEKRATAFGLMKIDEKGRIIEFS 854
            + VL IILGGGAGTRLYPLTK RAKPAVPL   YRLIDIPVSNC+N+ I KIYVLTQFNSASLNRHL+R Y  N  G+ ++GFVEVLAAQQ+ ENP+WFQGTADAVRQY WLF+E +V E+L+L+GDHLYRMDY  F++ HRET ADIT++ +P+DEKRA++FGLMKID+ GRI++FS
Sbjct:    2 KKVLAIILGGGAGTRLYPLTKLRAKPAVPLAGKYRLIDIPVSNCINAEILKIYVLTQFNSASLNRHLTRTY--NFTGF-HDGFVEVLAAQQTTENPSWFQGTADAVRQYGWLFDEWDVDEYLILSGDHLYRMDYSDFVKRHRETGADITLSVVPIDEKRASSFGLMKIDDNGRIVDFS 176
[Close]
BLAST of CV887103 vs. ExPASy Swiss-Prot
Match: GLGC_SYNY3 (Glucose-1-phosphate adenylyltransferase OS=Synechocystis sp. (strain PCC 6803) GN=glgC PE=1 SV=2)

HSP 1 Score: 262.307 bits (669), Expect = 2.473e-69
Identity = 128/178 (71.91%), Postives = 153/178 (85.96%), Query Frame = 3 
Query:  321 RSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPENPNWFQGTADAVRQYLWLFEEHNVLEFLVLAGDHLYRMDYERFIQAHRETDADITVAALPMDEKRATAFGLMKIDEKGRIIEFS 854
            + VL IILGGGAGTRLYPLTK RAKPAVPL   YRLIDIPVSNC+NS I KIYVLTQFNSASLNRH+SRAY  N  G++ EGFVEVLAAQQ+ +NP+WFQGTADAVRQYLWLF E +V E+L+L+GDHLYRMDY +F++ HRET+ADIT++ +P+D+++A   GLMKID +GRI +FS
Sbjct:   12 KRVLAIILGGGAGTRLYPLTKLRAKPAVPLAGKYRLIDIPVSNCINSEIVKIYVLTQFNSASLNRHISRAY--NFSGFQ-EGFVEVLAAQQTKDNPDWFQGTADAVRQYLWLFREWDVDEYLILSGDHLYRMDYAQFVKRHRETNADITLSVVPVDDRKAPELGLMKIDAQGRITDFS 186
[Close]
BLAST of CV887103 vs. ExPASy Swiss-Prot
Match: GLGC_SYNP2 (Glucose-1-phosphate adenylyltransferase OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=glgC PE=3 SV=1)

HSP 1 Score: 259.61 bits (662), Expect = 1.603e-68
Identity = 127/178 (71.35%), Postives = 148/178 (83.15%), Query Frame = 3 
Query:  321 RSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPENPNWFQGTADAVRQYLWLFEEHNVLEFLVLAGDHLYRMDYERFIQAHRETDADITVAALPMDEKRATAFGLMKIDEKGRIIEFS 854
            + VLGIILGGGAGTRLYPLTK RAKPAVPL   YRLIDIPVSNC+NS I KIY+LTQFNSASLNRH+SR Y  N  G+  EGF EVLAAQQ+ ENP+WFQGTADAVRQY WL E+ +V E+++L+GDHLYRMDY  FIQ HR+T ADIT++ +P+ EK A AFGLMKID  GR+++FS
Sbjct:    2 KRVLGIILGGGAGTRLYPLTKLRAKPAVPLAGKYRLIDIPVSNCINSEIHKIYILTQFNSASLNRHISRTY--NFTGF-TEGFTEVLAAQQTKENPDWFQGTADAVRQYSWLLEDWDVDEYIILSGDHLYRMDYREFIQRHRDTGADITLSVVPVGEKVAPAFGLMKIDANGRVVDFS 176
The following BLAST results are available for this feature:
BLAST of CV887103 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 308
Match NameE-valueIdentityDescription
GLGC_NOSP74.816e-7375.28Glucose-1-phosphate adenylyltransferase OS=Nostoc ... [more]
GLGC_ANAVT6.954e-7273.60Glucose-1-phosphate adenylyltransferase OS=Anabaen... [more]
GLGC_ANASP6.954e-7273.60Glucose-1-phosphate adenylyltransferase OS=Anabaen... [more]
GLGC_SYNP63.451e-7172.47Glucose-1-phosphate adenylyltransferase OS=Synecho... [more]
GLGC_SYNE73.451e-7172.47Glucose-1-phosphate adenylyltransferase OS=Synecho... [more]
GLGC_CYAP77.688e-7173.60Glucose-1-phosphate adenylyltransferase OS=Cyanoth... [more]
GLGC_CYAP84.983e-7071.91Glucose-1-phosphate adenylyltransferase OS=Cyanoth... [more]
GLGC_CYAA54.983e-7072.47Glucose-1-phosphate adenylyltransferase OS=Cyanoth... [more]
GLGC_SYNY32.473e-6971.91Glucose-1-phosphate adenylyltransferase OS=Synecho... [more]
GLGC_SYNP21.603e-6871.35Glucose-1-phosphate adenylyltransferase OS=Synecho... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_029B07_T3 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_029_T3_B07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV887103 ID=CV887103; Name=CV887103; organism=Citrus sinensis; type=EST; length=854bp
CTCACTCAGGCTCAGCTCGCTTAACGATTACTGTTAACGTTAACAGATTG
TACCGATTAATGGCGAGTATGGCGTCGATCGGATCGCTCAAAGTTCCGTC
ATCTCCGTCAACTGCAGCAACGTCGTCTAACTCCAACAATCACAGCCGCA
GGAGTGTGGTTAAACGACTGGCGTTCTCGTCGTCTCAGCTCTCCGGTGAC
AAGATTTTTTCTAAAGCTGTCACCGGTGATCGGCGAAGGGAGAGGCGTCC
GATCGTTGTGTCTCCTCAAGCGGTGTCGGATTCGAAAAATTCGCAGACTT
GCCTTGATCCTGAAGCCAGTCGAAGTGTTTTGGGGATTATACTTGGAGGT
GGAGCAGGGACTCGCTTGTATCCACTTACGAAGAAGAGGGCAAAGCCTGC
TGTTCCATTGGGAGCTAATTACAGGCTGATTGATATTCCTGTGAGCAATT
GTTTGAATAGTAACATTTCAAAGATCTATGTTCTCACTCAGTTCAATTCT
GCGTCCCTGAATCGTCACCTATCGAGGGCGTATGCTAGCAACATGGGTGG
TTACAAGAACGAAGGATTTGTTGAAGTTCTTGCTGCACAGCAGAGTCCAG
AGAATCCCAATTGGTTTCAGGGTACAGCTGATGCTGTGAGGCAGTATTTG
TGGCTGTTTGAGGAGCACAATGTTCTGGAATTTCTCGTTCTTGCTGGTGA
TCATTTGTACCGAATGGACTATGAGAGATTTATTCAGGCACACAGAGAAA
CTGATGCGGATATCACAGTAGCTGCGCTGCCAATGGATGAAAAACGGGCT
ACTGCTTTTGGTCTGATGAAGATCGATGAAAAGGGACGCATAATTGAATT
TTCT
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