CV887103
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV887103 vs. ExPASy Swiss-Prot
Match: GLGC_SALTI (Glucose-1-phosphate adenylyltransferase OS=Salmonella typhi GN=glgC PE=3 SV=1) HSP 1 Score: 160.614 bits (405), Expect = 1.013e-38 Identity = 88/193 (45.60%), Postives = 120/193 (62.18%), Query Frame = 3 Query: 273 VSDSKNSQTCLDPEASRSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPENPNWFQGTADAVRQYLWLFEEHNVLEFLVLAGDHLYRMDYERFIQAHRETDADITVAALPMDEKRATAFGLMKIDEKGRIIEF 851 VS KN + L + + +IL GG GTRL LT KRAKPAV G +R+ID +SNCLNS I +I V+TQ+ S +L +H+ R + S NE FV++L AQQ + NW++GTADAV Q L + + ++LAGDH+Y+ DY R + H E A TVA +P+ K ATAFG+M +DE +II+F Sbjct: 2 VSLEKNDRVMLARQLPLKSVALILAGGRGTRLKDLTNKRAKPAVHFGGKFRIIDFALSNCLNSGIRRIGVITQYQSHTLVQHIQRGW-SLFSEEMNE-FVDLLPAQQRMKGENWYRGTADAVTQNLDIIRCYKAEYVVILAGDHIYKQDYSRMLIDHVEKGARCTVACMPVPIKEATAFGVMAVDENDKIIDF 192
BLAST of CV887103 vs. ExPASy Swiss-Prot
Match: GLGC_SALDC (Glucose-1-phosphate adenylyltransferase OS=Salmonella dublin (strain CT_02021853) GN=glgC PE=3 SV=1) HSP 1 Score: 160.614 bits (405), Expect = 1.013e-38 Identity = 87/193 (45.08%), Postives = 119/193 (61.66%), Query Frame = 3 Query: 273 VSDSKNSQTCLDPEASRSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPENPNWFQGTADAVRQYLWLFEEHNVLEFLVLAGDHLYRMDYERFIQAHRETDADITVAALPMDEKRATAFGLMKIDEKGRIIEF 851 VS KN + L + + +IL GG GTRL LT KRAKPAV G +R+ID +SNCLNS I +I V+TQ+ S +L +H+ R + S NE FV++L AQQ + NW++GTADAV Q L + + ++LAGDH+Y+ DY R + H E A TV +P+ K ATAFG+M +DE +II+F Sbjct: 2 VSLEKNDRVMLARQLPLESVALILAGGRGTRLKDLTNKRAKPAVHFGGKFRIIDFALSNCLNSGIRRIGVITQYQSHTLVQHIQRGW-SLFSEEMNE-FVDLLPAQQRMKGENWYRGTADAVTQNLDIIRRYKAEYVVILAGDHIYKQDYSRMLIDHVEKGARCTVVCMPVPIKEATAFGVMAVDESDKIIDF 192
BLAST of CV887103 vs. ExPASy Swiss-Prot
Match: GLGC1_ALHEH (Glucose-1-phosphate adenylyltransferase 1 OS=Alkalilimnicola ehrlichei (strain MLHE-1) GN=glgC1 PE=3 SV=1) HSP 1 Score: 160.229 bits (404), Expect = 1.324e-38 Identity = 81/179 (45.25%), Postives = 116/179 (64.80%), Query Frame = 3 Query: 318 SRSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPENPNWFQGTADAVRQYLWLFEEHNVLEFLVLAGDHLYRMDYERFIQAHRETDADITVAALPMDEKRATAFGLMKIDEKGRIIEFS 854 +R L +I+ GG G RL LT R KPAVP G +RLID P+SNC+NS I +I VLTQ+ + SL +H+ R + G + FVE++ AQQ + P W+ GTADAV Q + + + HN LVLAGDH+Y+MDY I H E+ A +TV + + KRA+AFG+M ++E+ +++ F+ Sbjct: 14 TRDTLALIMAGGRGGRLSNLTDWRTKPAVPFGGKFRLIDFPLSNCINSGIRRIEVLTQYKAHSLIQHIQRGWGFLRGEFGE--FVELVPAQQRMDKPLWYAGTADAVYQNIDIIKAHNPSYVLVLAGDHVYKMDYGGMIARHAESGAAMTVGCVEVPRKRASAFGVMSVNEERQVLAFN 190
BLAST of CV887103 vs. ExPASy Swiss-Prot
Match: GLGC_THET8 (Glucose-1-phosphate adenylyltransferase OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=glgC PE=3 SV=1) HSP 1 Score: 159.073 bits (401), Expect = 2.949e-38 Identity = 81/178 (45.51%), Postives = 113/178 (63.48%), Query Frame = 3 Query: 327 VLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQ---SPENPNWFQGTADAVRQYLWLFEEHNVLEFLVLAGDHLYRMDYERFIQAHRETDADITVAALPMDEKRATAFGLMKIDEKGRIIEF 851 VLG+IL GG G+RLYPLT KRAKPAVP GA YR+ID ++N +NS I IYVLTQ+ + SL H+ R + G + + F+ ++ AQ P W++GTADA+ Q L L H V GDH+++M+ ++ H +T ADIT+AA P+ AT FG++++DE+ RI EF Sbjct: 6 VLGMILAGGQGSRLYPLTAKRAKPAVPFGAKYRIIDFVLNNFVNSGIYAIYVLTQYKAQSLTEHIQRYW--RFGAFLEDHFILLVPAQMYRYEELGPVWYRGTADAIYQNLHLVHNHAPKAVAVFGGDHIFKMNIRHMVEYHYDTRADITIAAYPVPVAEATRFGVLQVDEEWRITEF 181
BLAST of CV887103 vs. ExPASy Swiss-Prot
Match: GLGC_THET2 (Glucose-1-phosphate adenylyltransferase OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=glgC PE=3 SV=1) HSP 1 Score: 159.073 bits (401), Expect = 2.949e-38 Identity = 81/178 (45.51%), Postives = 113/178 (63.48%), Query Frame = 3 Query: 327 VLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQ---SPENPNWFQGTADAVRQYLWLFEEHNVLEFLVLAGDHLYRMDYERFIQAHRETDADITVAALPMDEKRATAFGLMKIDEKGRIIEF 851 VLG+IL GG G+RLYPLT KRAKPAVP GA YR+ID ++N +NS I IYVLTQ+ + SL H+ R + G + + F+ ++ AQ P W++GTADA+ Q L L H V GDH+++M+ ++ H +T ADIT+AA P+ AT FG++++DE+ RI EF Sbjct: 6 VLGMILAGGQGSRLYPLTAKRAKPAVPFGAKYRIIDFVLNNFVNSGIYAIYVLTQYKAQSLTEHIQRYW--RFGAFLEDHFILLVPAQMYRYEELGPVWYRGTADAIYQNLHLVHNHAPKAVAVFGGDHIFKMNIRHMVEYHYDTRADITIAAYPVPVAEATRFGVLQVDEEWRITEF 181
BLAST of CV887103 vs. ExPASy Swiss-Prot
Match: GLGC_THECA (Glucose-1-phosphate adenylyltransferase OS=Thermus caldophilus GN=glgC PE=3 SV=1) HSP 1 Score: 159.073 bits (401), Expect = 2.949e-38 Identity = 81/178 (45.51%), Postives = 113/178 (63.48%), Query Frame = 3 Query: 327 VLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQ---SPENPNWFQGTADAVRQYLWLFEEHNVLEFLVLAGDHLYRMDYERFIQAHRETDADITVAALPMDEKRATAFGLMKIDEKGRIIEF 851 VLG+IL GG G+RLYPLT KRAKPAVP GA YR+ID ++N +NS I IYVLTQ+ + SL H+ R + G + + F+ ++ AQ P W++GTADA+ Q L L H V GDH+++M+ ++ H +T ADIT+AA P+ AT FG++++DE+ RI EF Sbjct: 6 VLGMILAGGQGSRLYPLTAKRAKPAVPFGAKYRIIDFVLNNFVNSGIYAIYVLTQYKAQSLTEHIQRYW--RFGAFLEDHFILLVPAQMYRYEELGPVWYRGTADAIYQNLHLVHNHAPKAVAVFGGDHIFKMNIRHMVEYHYDTRADITIAAYPVPVAEATRFGVLQVDEEWRITEF 181
BLAST of CV887103 vs. ExPASy Swiss-Prot
Match: GLGC_BURXL (Glucose-1-phosphate adenylyltransferase OS=Burkholderia xenovorans (strain LB400) GN=glgC PE=3 SV=1) HSP 1 Score: 159.073 bits (401), Expect = 2.949e-38 Identity = 83/180 (46.11%), Postives = 111/180 (61.67%), Query Frame = 3 Query: 312 EASRSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPENPNWFQGTADAVRQYLWLFEEHNVLEFLVLAGDHLYRMDYERFIQAHRETDADITVAALPMDEKRATAFGLMKIDEKGRIIEF 851 + R+ L I+L GG GTRL PLT KR KPAV G YR+ID +SNCLNS I +I V+TQ+ + SL RHL R ++ G + F+++ AQQ E +W++GTADAV Q L + +VLAGDH+Y+MDY R I H E+ AD TV + + A AFG+M +DE R+ F Sbjct: 9 DLQRTTLAIVLAGGRGTRLGPLTNKRVKPAVHFGGKYRIIDFALSNCLNSGIRRIAVVTQYKAHSLLRHLQRGWSFLRGEFGE--FIDLWPAQQRVEGAHWYRGTADAVFQNLDIIRSIRPKYVVVLAGDHIYKMDYTRMIADHAESGADCTVGCIEVPRMDAVAFGVMHVDENRRVTGF 186
BLAST of CV887103 vs. ExPASy Swiss-Prot
Match: GLGC_THICR (Glucose-1-phosphate adenylyltransferase OS=Thiomicrospira crunogena (strain XCL-2) GN=glgC PE=3 SV=1) HSP 1 Score: 158.688 bits (400), Expect = 3.851e-38 Identity = 83/181 (45.86%), Postives = 115/181 (63.54%), Query Frame = 3 Query: 312 EASRSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPENPNWFQGTADAVRQYLWLFEEHNVLEFLVLAGDHLYRMDYERFIQAHRETDADITVAALPMDEKRATAFGLMKIDEKGRIIEFS 854 + +R L ++L GG G+RL LTK RAKPAVP G YR+ID +SNC+NS I KI VLTQ+ S SL RH+ RA+ + Y+ FVE+L AQQ + W++GTADA+ Q L + H LVL GDH+Y MDY + + H E+ AD+T+ + + AT FG+M +DE +I +F+ Sbjct: 12 DLTRKTLALVLAGGEGSRLKDLTKWRAKPAVPFGGKYRIIDFVLSNCVNSGIRKIGVLTQYKSHSLIRHVQRAW--SFMRYEVGEFVELLPAQQRVDK-GWYKGTADALYQNLDIMRRHTPDYVLVLGGDHIYSMDYSKMLYEHAESGADVTIGCIEVPRMEATGFGVMSVDECFKITKFT 189
BLAST of CV887103 vs. ExPASy Swiss-Prot
Match: GLGC_RHOBA (Glucose-1-phosphate adenylyltransferase OS=Rhodopirellula baltica GN=glgC PE=3 SV=1) HSP 1 Score: 158.303 bits (399), Expect = 5.030e-38 Identity = 78/177 (44.07%), Postives = 118/177 (66.67%), Query Frame = 3 Query: 321 RSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPENPNWFQGTADAVRQYLWLFEEHNVLEFLVLAGDHLYRMDYERFIQAHRETDADITVAALPMDEKRATAFGLMKIDEKGRIIEF 851 R + +IL GG G+RL PLT+ RAKPAVP+G YR+ID +SNCLNS++ ++ +LTQ+ + SL+RH++ A+ + E F++V+ QQ ++ NW+QGTADAV Q ++ E ++LAGDHLY+M+YE + H AD+TV AL + + A FG+M++D R++EF Sbjct: 23 RQTVTVILAGGRGSRLEPLTRDRAKPAVPIGGAYRIIDFVLSNCLNSDMRRLLLLTQYKAQSLDRHINVAWRNYFCRELGE-FIDVVPPQQRIDD-NWYQGTADAVYQNIYAIEREAPEYVVILAGDHLYKMNYESMVNFHHRKGADVTVGALRVSREEARQFGVMQVDTDNRLVEF 197
BLAST of CV887103 vs. ExPASy Swiss-Prot
Match: GLGC_DEIGD (Glucose-1-phosphate adenylyltransferase OS=Deinococcus geothermalis (strain DSM 11300) GN=glgC PE=3 SV=1) HSP 1 Score: 158.303 bits (399), Expect = 5.030e-38 Identity = 78/178 (43.82%), Postives = 113/178 (63.48%), Query Frame = 3 Query: 327 VLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQ---SPENPNWFQGTADAVRQYLWLFEEHNVLEFLVLAGDHLYRMDYERFIQAHRETDADITVAALPMDEKRATAFGLMKIDEKGRIIEF 851 VLG+IL GG G+RL PLT KR+KPAVP G YR+ID ++N +NS + IYVLTQ+ + SL H+ R + G + + F+ ++ AQ W++GTADAV Q L L + N + +GDH+Y+M+ E +QAH + AD+T+AA PM RA FG+M++D++ R+ EF Sbjct: 5 VLGMILAGGQGSRLAPLTLKRSKPAVPFGGKYRIIDFAINNFINSGVFSIYVLTQYKAQSLTEHIQRGW--RFGTFLQDYFITLVPAQMYRYEELGAVWYRGTADAVYQNLHLIDNFNADYVAIFSGDHIYKMNVEHMLQAHMDARADVTIAAYPMPRTRAHQFGVMQVDDRWRVTEF 180 The following BLAST results are available for this feature:
BLAST of CV887103 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 308
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Sequences
The
following sequences are available for this feature:
EST sequence >CV887103 ID=CV887103; Name=CV887103; organism=Citrus sinensis; type=EST; length=854bpback to top |