CV887103

Overview
NameCV887103
Unique NameCV887103
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length854
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CV887103 vs. ExPASy Swiss-Prot
Match: GLGC_ECOSE (Glucose-1-phosphate adenylyltransferase OS=Escherichia coli (strain SE11) GN=glgC PE=3 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 8.579e-38
Identity = 85/193 (44.04%), Postives = 119/193 (61.66%), Query Frame = 3 
Query:  273 VSDSKNSQTCLDPEASRSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPENPNWFQGTADAVRQYLWLFEEHNVLEFLVLAGDHLYRMDYERFIQAHRETDADITVAALPMDEKRATAFGLMKIDEKGRIIEF 851
            VS  KN    L  +     + +IL GG GTRL  LT KRAKPAV  G  +R+ID  +SNC+NS I ++ V+TQ+ S +L +H+ R + S      NE FV++L AQQ  +  NW++GTADAV Q L +   +     ++LAGDH+Y+ DY R +  H E  A  TVA +P+  + A+AFG+M +DE  +IIEF
Sbjct:    2 VSLEKNDHLMLARQLPLKSVALILAGGRGTRLKDLTNKRAKPAVHFGGKFRIIDFALSNCINSGIRRMGVITQYQSHTLVQHIQRGW-SFFNEEMNE-FVDLLPAQQRMKGENWYRGTADAVTQNLDIIRRYKAEYVVILAGDHIYKQDYSRMLIDHVEKGARCTVACMPVPIEEASAFGVMAVDENDKIIEF 192
[Close]
BLAST of CV887103 vs. ExPASy Swiss-Prot
Match: GLGC_ECOLU (Glucose-1-phosphate adenylyltransferase OS=Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC) GN=glgC PE=3 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 8.579e-38
Identity = 85/193 (44.04%), Postives = 119/193 (61.66%), Query Frame = 3 
Query:  273 VSDSKNSQTCLDPEASRSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPENPNWFQGTADAVRQYLWLFEEHNVLEFLVLAGDHLYRMDYERFIQAHRETDADITVAALPMDEKRATAFGLMKIDEKGRIIEF 851
            VS  KN    L  +     + +IL GG GTRL  LT KRAKPAV  G  +R+ID  +SNC+NS I ++ V+TQ+ S +L +H+ R + S      NE FV++L AQQ  +  NW++GTADAV Q L +   +     ++LAGDH+Y+ DY R +  H E  A  TVA +P+  + A+AFG+M +DE  +IIEF
Sbjct:    2 VSLEKNDHLMLARQLPLKSVALILAGGRGTRLKDLTNKRAKPAVHFGGKFRIIDFALSNCINSGIRRMGVITQYQSHTLVQHIQRGW-SFFNEEMNE-FVDLLPAQQRMKGENWYRGTADAVTQNLDIIRRYKAEYVVILAGDHIYKQDYSRMLIDHVEKGARCTVACMPVPIEEASAFGVMAVDENDKIIEF 192
[Close]
BLAST of CV887103 vs. ExPASy Swiss-Prot
Match: GLGC_ECOLI (Glucose-1-phosphate adenylyltransferase OS=Escherichia coli (strain K12) GN=glgC PE=1 SV=2)

HSP 1 Score: 157.532 bits (397), Expect = 8.579e-38
Identity = 85/193 (44.04%), Postives = 119/193 (61.66%), Query Frame = 3 
Query:  273 VSDSKNSQTCLDPEASRSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPENPNWFQGTADAVRQYLWLFEEHNVLEFLVLAGDHLYRMDYERFIQAHRETDADITVAALPMDEKRATAFGLMKIDEKGRIIEF 851
            VS  KN    L  +     + +IL GG GTRL  LT KRAKPAV  G  +R+ID  +SNC+NS I ++ V+TQ+ S +L +H+ R + S      NE FV++L AQQ  +  NW++GTADAV Q L +   +     ++LAGDH+Y+ DY R +  H E  A  TVA +P+  + A+AFG+M +DE  +IIEF
Sbjct:    2 VSLEKNDHLMLARQLPLKSVALILAGGRGTRLKDLTNKRAKPAVHFGGKFRIIDFALSNCINSGIRRMGVITQYQSHTLVQHIQRGW-SFFNEEMNE-FVDLLPAQQRMKGENWYRGTADAVTQNLDIIRRYKAEYVVILAGDHIYKQDYSRMLIDHVEKGARCTVACMPVPIEEASAFGVMAVDENDKIIEF 192
[Close]
BLAST of CV887103 vs. ExPASy Swiss-Prot
Match: GLGC_ECOLC (Glucose-1-phosphate adenylyltransferase OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) GN=glgC PE=3 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 8.579e-38
Identity = 85/193 (44.04%), Postives = 119/193 (61.66%), Query Frame = 3 
Query:  273 VSDSKNSQTCLDPEASRSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPENPNWFQGTADAVRQYLWLFEEHNVLEFLVLAGDHLYRMDYERFIQAHRETDADITVAALPMDEKRATAFGLMKIDEKGRIIEF 851
            VS  KN    L  +     + +IL GG GTRL  LT KRAKPAV  G  +R+ID  +SNC+NS I ++ V+TQ+ S +L +H+ R + S      NE FV++L AQQ  +  NW++GTADAV Q L +   +     ++LAGDH+Y+ DY R +  H E  A  TVA +P+  + A+AFG+M +DE  +IIEF
Sbjct:    2 VSLEKNDHLMLARQLPLKSVALILAGGRGTRLKDLTNKRAKPAVHFGGKFRIIDFALSNCINSGIRRMGVITQYQSHTLVQHIQRGW-SFFNEEMNE-FVDLLPAQQRMKGENWYRGTADAVTQNLDIIRRYKAEYVVILAGDHIYKQDYSRMLIDHVEKGARCTVACMPVPIEEASAFGVMAVDENDKIIEF 192
[Close]
BLAST of CV887103 vs. ExPASy Swiss-Prot
Match: GLGC_ECOL6 (Glucose-1-phosphate adenylyltransferase OS=Escherichia coli O6 GN=glgC PE=3 SV=2)

HSP 1 Score: 157.532 bits (397), Expect = 8.579e-38
Identity = 85/193 (44.04%), Postives = 119/193 (61.66%), Query Frame = 3 
Query:  273 VSDSKNSQTCLDPEASRSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPENPNWFQGTADAVRQYLWLFEEHNVLEFLVLAGDHLYRMDYERFIQAHRETDADITVAALPMDEKRATAFGLMKIDEKGRIIEF 851
            VS  KN    L  +     + +IL GG GTRL  LT KRAKPAV  G  +R+ID  +SNC+NS I ++ V+TQ+ S +L +H+ R + S      NE FV++L AQQ  +  NW++GTADAV Q L +   +     ++LAGDH+Y+ DY R +  H E  A  TVA +P+  + A+AFG+M +DE  +IIEF
Sbjct:    2 VSLEKNDHLMLARQLPLKSVALILAGGRGTRLKDLTNKRAKPAVHFGGKFRIIDFALSNCINSGIRRMGVITQYQSHTLVQHIQRGW-SFFNEEMNE-FVDLLPAQQRMKGENWYRGTADAVTQNLDIIRRYKAEYVVILAGDHIYKQDYSRMLIDHVEKGARCTVACMPVPIEEASAFGVMAVDENDKIIEF 192
[Close]
BLAST of CV887103 vs. ExPASy Swiss-Prot
Match: GLGC_ECOL5 (Glucose-1-phosphate adenylyltransferase OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=glgC PE=3 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 8.579e-38
Identity = 85/193 (44.04%), Postives = 119/193 (61.66%), Query Frame = 3 
Query:  273 VSDSKNSQTCLDPEASRSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPENPNWFQGTADAVRQYLWLFEEHNVLEFLVLAGDHLYRMDYERFIQAHRETDADITVAALPMDEKRATAFGLMKIDEKGRIIEF 851
            VS  KN    L  +     + +IL GG GTRL  LT KRAKPAV  G  +R+ID  +SNC+NS I ++ V+TQ+ S +L +H+ R + S      NE FV++L AQQ  +  NW++GTADAV Q L +   +     ++LAGDH+Y+ DY R +  H E  A  TVA +P+  + A+AFG+M +DE  +IIEF
Sbjct:    2 VSLEKNDHLMLARQLPLKSVALILAGGRGTRLKDLTNKRAKPAVHFGGKFRIIDFALSNCINSGIRRMGVITQYQSHTLVQHIQRGW-SFFNEEMNE-FVDLLPAQQRMKGENWYRGTADAVTQNLDIIRRYKAEYVVILAGDHIYKQDYSRMLIDHVEKGARCTVACMPVPIEEASAFGVMAVDENDKIIEF 192
[Close]
BLAST of CV887103 vs. ExPASy Swiss-Prot
Match: GLGC_ECOHS (Glucose-1-phosphate adenylyltransferase OS=Escherichia coli O9:H4 (strain HS) GN=glgC PE=3 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 8.579e-38
Identity = 85/193 (44.04%), Postives = 119/193 (61.66%), Query Frame = 3 
Query:  273 VSDSKNSQTCLDPEASRSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPENPNWFQGTADAVRQYLWLFEEHNVLEFLVLAGDHLYRMDYERFIQAHRETDADITVAALPMDEKRATAFGLMKIDEKGRIIEF 851
            VS  KN    L  +     + +IL GG GTRL  LT KRAKPAV  G  +R+ID  +SNC+NS I ++ V+TQ+ S +L +H+ R + S      NE FV++L AQQ  +  NW++GTADAV Q L +   +     ++LAGDH+Y+ DY R +  H E  A  TVA +P+  + A+AFG+M +DE  +IIEF
Sbjct:    2 VSLEKNDHLMLARQLPLKSVALILAGGRGTRLKDLTNKRAKPAVHFGGKFRIIDFALSNCINSGIRRMGVITQYQSHTLVQHIQRGW-SFFNEEMNE-FVDLLPAQQRMKGENWYRGTADAVTQNLDIIRRYKAEYVVILAGDHIYKQDYSRMLIDHVEKGARCTVACMPVPIEEASAFGVMAVDENDKIIEF 192
[Close]
BLAST of CV887103 vs. ExPASy Swiss-Prot
Match: GLGC_ECODH (Glucose-1-phosphate adenylyltransferase OS=Escherichia coli (strain K12 / DH10B) GN=glgC PE=3 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 8.579e-38
Identity = 85/193 (44.04%), Postives = 119/193 (61.66%), Query Frame = 3 
Query:  273 VSDSKNSQTCLDPEASRSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPENPNWFQGTADAVRQYLWLFEEHNVLEFLVLAGDHLYRMDYERFIQAHRETDADITVAALPMDEKRATAFGLMKIDEKGRIIEF 851
            VS  KN    L  +     + +IL GG GTRL  LT KRAKPAV  G  +R+ID  +SNC+NS I ++ V+TQ+ S +L +H+ R + S      NE FV++L AQQ  +  NW++GTADAV Q L +   +     ++LAGDH+Y+ DY R +  H E  A  TVA +P+  + A+AFG+M +DE  +IIEF
Sbjct:    2 VSLEKNDHLMLARQLPLKSVALILAGGRGTRLKDLTNKRAKPAVHFGGKFRIIDFALSNCINSGIRRMGVITQYQSHTLVQHIQRGW-SFFNEEMNE-FVDLLPAQQRMKGENWYRGTADAVTQNLDIIRRYKAEYVVILAGDHIYKQDYSRMLIDHVEKGARCTVACMPVPIEEASAFGVMAVDENDKIIEF 192
[Close]
BLAST of CV887103 vs. ExPASy Swiss-Prot
Match: GLGC_ECOBW (Glucose-1-phosphate adenylyltransferase OS=Escherichia coli (strain K12 / BW2952) GN=glgC PE=3 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 8.579e-38
Identity = 85/193 (44.04%), Postives = 119/193 (61.66%), Query Frame = 3 
Query:  273 VSDSKNSQTCLDPEASRSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPENPNWFQGTADAVRQYLWLFEEHNVLEFLVLAGDHLYRMDYERFIQAHRETDADITVAALPMDEKRATAFGLMKIDEKGRIIEF 851
            VS  KN    L  +     + +IL GG GTRL  LT KRAKPAV  G  +R+ID  +SNC+NS I ++ V+TQ+ S +L +H+ R + S      NE FV++L AQQ  +  NW++GTADAV Q L +   +     ++LAGDH+Y+ DY R +  H E  A  TVA +P+  + A+AFG+M +DE  +IIEF
Sbjct:    2 VSLEKNDHLMLARQLPLKSVALILAGGRGTRLKDLTNKRAKPAVHFGGKFRIIDFALSNCINSGIRRMGVITQYQSHTLVQHIQRGW-SFFNEEMNE-FVDLLPAQQRMKGENWYRGTADAVTQNLDIIRRYKAEYVVILAGDHIYKQDYSRMLIDHVEKGARCTVACMPVPIEEASAFGVMAVDENDKIIEF 192
[Close]
BLAST of CV887103 vs. ExPASy Swiss-Prot
Match: GLGC_ECO8A (Glucose-1-phosphate adenylyltransferase OS=Escherichia coli O8 (strain IAI1) GN=glgC PE=3 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 8.579e-38
Identity = 85/193 (44.04%), Postives = 119/193 (61.66%), Query Frame = 3 
Query:  273 VSDSKNSQTCLDPEASRSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPENPNWFQGTADAVRQYLWLFEEHNVLEFLVLAGDHLYRMDYERFIQAHRETDADITVAALPMDEKRATAFGLMKIDEKGRIIEF 851
            VS  KN    L  +     + +IL GG GTRL  LT KRAKPAV  G  +R+ID  +SNC+NS I ++ V+TQ+ S +L +H+ R + S      NE FV++L AQQ  +  NW++GTADAV Q L +   +     ++LAGDH+Y+ DY R +  H E  A  TVA +P+  + A+AFG+M +DE  +IIEF
Sbjct:    2 VSLEKNDHLMLARQLPLKSVALILAGGRGTRLKDLTNKRAKPAVHFGGKFRIIDFALSNCINSGIRRMGVITQYQSHTLVQHIQRGW-SFFNEEMNE-FVDLLPAQQRMKGENWYRGTADAVTQNLDIIRRYKAEYVVILAGDHIYKQDYSRMLIDHVEKGARCTVACMPVPIEEASAFGVMAVDENDKIIEF 192
The following BLAST results are available for this feature:
BLAST of CV887103 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 308
Match NameE-valueIdentityDescription
GLGC_ECOSE8.579e-3844.04Glucose-1-phosphate adenylyltransferase OS=Escheri... [more]
GLGC_ECOLU8.579e-3844.04Glucose-1-phosphate adenylyltransferase OS=Escheri... [more]
GLGC_ECOLI8.579e-3844.04Glucose-1-phosphate adenylyltransferase OS=Escheri... [more]
GLGC_ECOLC8.579e-3844.04Glucose-1-phosphate adenylyltransferase OS=Escheri... [more]
GLGC_ECOL68.579e-3844.04Glucose-1-phosphate adenylyltransferase OS=Escheri... [more]
GLGC_ECOL58.579e-3844.04Glucose-1-phosphate adenylyltransferase OS=Escheri... [more]
GLGC_ECOHS8.579e-3844.04Glucose-1-phosphate adenylyltransferase OS=Escheri... [more]
GLGC_ECODH8.579e-3844.04Glucose-1-phosphate adenylyltransferase OS=Escheri... [more]
GLGC_ECOBW8.579e-3844.04Glucose-1-phosphate adenylyltransferase OS=Escheri... [more]
GLGC_ECO8A8.579e-3844.04Glucose-1-phosphate adenylyltransferase OS=Escheri... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_029B07_T3 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_029_T3_B07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV887103 ID=CV887103; Name=CV887103; organism=Citrus sinensis; type=EST; length=854bp
CTCACTCAGGCTCAGCTCGCTTAACGATTACTGTTAACGTTAACAGATTG
TACCGATTAATGGCGAGTATGGCGTCGATCGGATCGCTCAAAGTTCCGTC
ATCTCCGTCAACTGCAGCAACGTCGTCTAACTCCAACAATCACAGCCGCA
GGAGTGTGGTTAAACGACTGGCGTTCTCGTCGTCTCAGCTCTCCGGTGAC
AAGATTTTTTCTAAAGCTGTCACCGGTGATCGGCGAAGGGAGAGGCGTCC
GATCGTTGTGTCTCCTCAAGCGGTGTCGGATTCGAAAAATTCGCAGACTT
GCCTTGATCCTGAAGCCAGTCGAAGTGTTTTGGGGATTATACTTGGAGGT
GGAGCAGGGACTCGCTTGTATCCACTTACGAAGAAGAGGGCAAAGCCTGC
TGTTCCATTGGGAGCTAATTACAGGCTGATTGATATTCCTGTGAGCAATT
GTTTGAATAGTAACATTTCAAAGATCTATGTTCTCACTCAGTTCAATTCT
GCGTCCCTGAATCGTCACCTATCGAGGGCGTATGCTAGCAACATGGGTGG
TTACAAGAACGAAGGATTTGTTGAAGTTCTTGCTGCACAGCAGAGTCCAG
AGAATCCCAATTGGTTTCAGGGTACAGCTGATGCTGTGAGGCAGTATTTG
TGGCTGTTTGAGGAGCACAATGTTCTGGAATTTCTCGTTCTTGCTGGTGA
TCATTTGTACCGAATGGACTATGAGAGATTTATTCAGGCACACAGAGAAA
CTGATGCGGATATCACAGTAGCTGCGCTGCCAATGGATGAAAAACGGGCT
ACTGCTTTTGGTCTGATGAAGATCGATGAAAAGGGACGCATAATTGAATT
TTCT
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