EY720727
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY720727 vs. ExPASy Swiss-Prot
Match: MSBA_PSEF5 (Lipid A export ATP-binding/permease protein msbA OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=msbA PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 1.740e-23 Identity = 54/83 (65.06%), Postives = 68/83 (81.93%), Query Frame = 3 Query: 15 GLDAHVGERGVKLSGGQRQRIAIARVLLKDAPILILDEATSALDSEVEAAIQESLEALMQGKTVIAIAHRLSTIARMDRLVVL 263 GLD VGE GV LSGGQRQR+AIAR LLK+AP+LILDEATSALD+E E IQ +L+ +M+G+T + IAHRLSTI + D ++V+ Sbjct: 481 GLDTQVGENGVLLSGGQRQRLAIARALLKNAPLLILDEATSALDTESERHIQAALDKVMKGRTTLVIAHRLSTIEKADLILVM 563
BLAST of EY720727 vs. ExPASy Swiss-Prot
Match: MSBA_MANSM (Lipid A export ATP-binding/permease protein msbA OS=Mannheimia succiniciproducens (strain MBEL55E) GN=msbA PE=3 SV=2) HSP 1 Score: 107.842 bits (268), Expect = 1.740e-23 Identity = 53/83 (63.86%), Postives = 67/83 (80.72%), Query Frame = 3 Query: 15 GLDAHVGERGVKLSGGQRQRIAIARVLLKDAPILILDEATSALDSEVEAAIQESLEALMQGKTVIAIAHRLSTIARMDRLVVL 263 GLD +GE G LSGGQRQR+AIAR LL+D+P+LILDEATSALD+E E AIQ +LE L + +TV+ IAHRLSTI + D ++V+ Sbjct: 472 GLDTVIGENGASLSGGQRQRLAIARALLRDSPVLILDEATSALDTESERAIQAALEELQKDRTVLVIAHRLSTIEKADEILVI 554
BLAST of EY720727 vs. ExPASy Swiss-Prot
Match: MSBA_BORA1 (Lipid A export ATP-binding/permease protein msbA OS=Bordetella avium (strain 197N) GN=msbA PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 1.740e-23 Identity = 52/84 (61.90%), Postives = 67/84 (79.76%), Query Frame = 3 Query: 12 RGLDAHVGERGVKLSGGQRQRIAIARVLLKDAPILILDEATSALDSEVEAAIQESLEALMQGKTVIAIAHRLSTIARMDRLVVL 263 +G+ VGE +LSGGQRQR+AIAR L+K+APILILDEATSALD+E E +Q SL+ LM+G+T + IAHRLST+ DR++VL Sbjct: 476 KGIHTPVGENAARLSGGQRQRLAIARALIKNAPILILDEATSALDNESERQVQSSLDRLMRGRTTLVIAHRLSTVQNADRIIVL 559
BLAST of EY720727 vs. ExPASy Swiss-Prot
Match: MSBA_SHISS (Lipid A export ATP-binding/permease protein msbA OS=Shigella sonnei (strain Ss046) GN=msbA PE=3 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 2.273e-23 Identity = 55/83 (66.27%), Postives = 67/83 (80.72%), Query Frame = 3 Query: 15 GLDAHVGERGVKLSGGQRQRIAIARVLLKDAPILILDEATSALDSEVEAAIQESLEALMQGKTVIAIAHRLSTIARMDRLVVL 263 GLD +GE GV LSGGQRQRIAIAR LL+D+PILILDEATSALD+E E AIQ +L+ L + +T + IAHRLSTI + D +VV+ Sbjct: 469 GLDTVIGENGVLLSGGQRQRIAIARALLRDSPILILDEATSALDTESERAIQAALDELQKNRTSLVIAHRLSTIEKADEIVVV 551
BLAST of EY720727 vs. ExPASy Swiss-Prot
Match: MSBA_SHIFL (Lipid A export ATP-binding/permease protein msbA OS=Shigella flexneri GN=msbA PE=3 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 2.273e-23 Identity = 55/83 (66.27%), Postives = 67/83 (80.72%), Query Frame = 3 Query: 15 GLDAHVGERGVKLSGGQRQRIAIARVLLKDAPILILDEATSALDSEVEAAIQESLEALMQGKTVIAIAHRLSTIARMDRLVVL 263 GLD +GE GV LSGGQRQRIAIAR LL+D+PILILDEATSALD+E E AIQ +L+ L + +T + IAHRLSTI + D +VV+ Sbjct: 469 GLDTVIGENGVLLSGGQRQRIAIARALLRDSPILILDEATSALDTESERAIQAALDELQKNRTSLVIAHRLSTIEKADEIVVV 551
BLAST of EY720727 vs. ExPASy Swiss-Prot
Match: MSBA_SHIDS (Lipid A export ATP-binding/permease protein msbA OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=msbA PE=3 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 2.273e-23 Identity = 55/83 (66.27%), Postives = 67/83 (80.72%), Query Frame = 3 Query: 15 GLDAHVGERGVKLSGGQRQRIAIARVLLKDAPILILDEATSALDSEVEAAIQESLEALMQGKTVIAIAHRLSTIARMDRLVVL 263 GLD +GE GV LSGGQRQRIAIAR LL+D+PILILDEATSALD+E E AIQ +L+ L + +T + IAHRLSTI + D +VV+ Sbjct: 469 GLDTVIGENGVLLSGGQRQRIAIARALLRDSPILILDEATSALDTESERAIQAALDELQKNRTSLVIAHRLSTIEKADEIVVV 551
BLAST of EY720727 vs. ExPASy Swiss-Prot
Match: MSBA_SHIBS (Lipid A export ATP-binding/permease protein msbA OS=Shigella boydii serotype 4 (strain Sb227) GN=msbA PE=3 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 2.273e-23 Identity = 55/83 (66.27%), Postives = 67/83 (80.72%), Query Frame = 3 Query: 15 GLDAHVGERGVKLSGGQRQRIAIARVLLKDAPILILDEATSALDSEVEAAIQESLEALMQGKTVIAIAHRLSTIARMDRLVVL 263 GLD +GE GV LSGGQRQRIAIAR LL+D+PILILDEATSALD+E E AIQ +L+ L + +T + IAHRLSTI + D +VV+ Sbjct: 469 GLDTVIGENGVLLSGGQRQRIAIARALLRDSPILILDEATSALDTESERAIQAALDELQKNRTSLVIAHRLSTIEKADEIVVV 551
BLAST of EY720727 vs. ExPASy Swiss-Prot
Match: MSBA_IDILO (Lipid A export ATP-binding/permease protein msbA OS=Idiomarina loihiensis GN=msbA PE=3 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 2.273e-23 Identity = 56/84 (66.67%), Postives = 66/84 (78.57%), Query Frame = 3 Query: 12 RGLDAHVGERGVKLSGGQRQRIAIARVLLKDAPILILDEATSALDSEVEAAIQESLEALMQGKTVIAIAHRLSTIARMDRLVVL 263 +GLD VGE GV LSGGQRQRIAIAR LL+DAPILILDEATSALD+E E IQ++L L + +T I IAHRLSTI D ++V+ Sbjct: 466 KGLDTMVGENGVMLSGGQRQRIAIARALLQDAPILILDEATSALDTESERHIQDALGTLRKNRTAIVIAHRLSTIENADEILVM 549
BLAST of EY720727 vs. ExPASy Swiss-Prot
Match: MSBA_HAHCH (Lipid A export ATP-binding/permease protein msbA OS=Hahella chejuensis (strain KCTC 2396) GN=msbA PE=3 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 2.273e-23 Identity = 52/84 (61.90%), Postives = 66/84 (78.57%), Query Frame = 3 Query: 12 RGLDAHVGERGVKLSGGQRQRIAIARVLLKDAPILILDEATSALDSEVEAAIQESLEALMQGKTVIAIAHRLSTIARMDRLVVL 263 +G D +GE G +LSGGQRQR+ IAR LLKD+PILILDEATSALD+ E IQ +LE LM+G+T + +AHRLSTI D++VV+ Sbjct: 468 QGFDTLLGENGTRLSGGQRQRMVIARALLKDSPILILDEATSALDTHAERNIQSALETLMKGRTTLVVAHRLSTIENADKIVVM 551
BLAST of EY720727 vs. ExPASy Swiss-Prot
Match: MSBA_ECOUT (Lipid A export ATP-binding/permease protein msbA OS=Escherichia coli (strain UTI89 / UPEC) GN=msbA PE=3 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 2.273e-23 Identity = 55/83 (66.27%), Postives = 67/83 (80.72%), Query Frame = 3 Query: 15 GLDAHVGERGVKLSGGQRQRIAIARVLLKDAPILILDEATSALDSEVEAAIQESLEALMQGKTVIAIAHRLSTIARMDRLVVL 263 GLD +GE GV LSGGQRQRIAIAR LL+D+PILILDEATSALD+E E AIQ +L+ L + +T + IAHRLSTI + D +VV+ Sbjct: 469 GLDTVIGENGVLLSGGQRQRIAIARALLRDSPILILDEATSALDTESERAIQAALDELQKNRTSLVIAHRLSTIEKADEIVVV 551 The following BLAST results are available for this feature:
BLAST of EY720727 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 383
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Sequences
The
following sequences are available for this feature:
EST sequence >EY720727 ID=EY720727; Name=EY720727; organism=Citrus sinensis; type=EST; length=264bpback to top |